CBS51388_008171-T1, CBS51388_008171-T1 (mRNA) Aspergillus niger CBS 513.88

Overview


Name	CBS51388_008171-T1
Unique Name	CBS51388_008171-T1
Type	mRNA
Organism	Aspergillus niger CBS 513.88

Sequences

The following sequences are available for this feature:

mRNA from alignment at An12:2353777..2355958+
coding sequence from alignment at An12:2353777..2355958+

mRNA from alignment at An12:2353777..2355958+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CBS51388_008171-T1 ID=CBS51388_008171-T1|Name=CBS51388_008171-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2182bp|location=Sequence derived from alignment at An12:2353777..2355958+ (Aspergillus niger CBS 513.88)
ATGACATCAGGGGCCGTCGTCACTACCACTGAGGCCCCTGCTCGCTCTGG
CAAGCCAACTGACACCCCAGTGCGCTCTCGTTCCTTGGGAGGATGCGAGA
CCTGTCGTCGGCGCCATGCTAAGTGTGATGAGACTCGGCCATCATGTCTC
GTGTGTAAGCGTGCGGGGCTCGTCTGTGAGAGGTACGAGATCCGGCTGTT
GTTCGATGCGAGCGACAGTCAGAGCTCACGATGTCGCCGTCCTCTGTTCA
CCGAGGATATGCGTCAGCGCATGAGTGAGCAGTTGACCGACAGCTTGGAC
TTGGATGATGTCCATACCATCCTGACCAAGATTGATGATCAATGCGAGGG
CCAGGAGGGAGATACTAATTCCAGTTTTACTACCCGCATGGGTCCCTTTG
GTGCCTTTCGGGTGGTTCGAGCTGAGATGGACCTTCCCGAATCCCCAATG
GACCCAGTCGACGAGCCCCTTCCTCAGGTGGAAGACAACCCAGTAAATGC
TGGGCTGGAAATGTCTTTGGATGATGCATTTAGCAATGATCCCCTCATGG
AGTGTCTGTTTGGCCATGTGAACGTAGATGTTACTGCCGACTTGGATGCT
CATGACTTCTTCGCCGCAACCCTACCTTCAGCCGAAAGTGAAGGAATTTC
CCCACAATCCTTGTCAGGGGGCTTCCTTATGGGACCATCGCCATCAGTTC
CTCTGCAAGCATCGTTATTATCGTCGCCGGAGATCCAATATGCTCCGTCC
GTGACCAACCTGGCCCCGCCAGATGCCCCCTTATTGCTATCTGCATACAC
GAAGAATGTAACTCAGCTGTTCAGCCCAATACAGCTGGAAAAGAGCCCCT
GGAGTATGCTCCATATGCCTCCCGCCATGGAGACCTTAACTTTGTTGACT
ATGGGAGAGCTGGCCAACAACACCAGGATGTCTATCTTCTATGCAATCCT
GGCCACTTCGGCCTTCACCCAGCGTCTATCCTCGTTGACGCGCAGCGCAA
GTCAATATTGGCAGAGACAGGCAGAGACCTTTGCCATCGAAGCCCAGAAT
TATCTCAAACGAGCGCTACATGATGCATCATCGAGCGCCAAAAAAGTCAA
GTACAAAGACGTCCTTATCGCCTTGCTGTGCATGAACACGGTTTCGGTAA
GCACAACAGCCGCAGCTGAGCAGAGCACAAGTCTCACCATGAACTTAGGC
CTACCAAGGGAGCACAGAGCGGGTGCGACGATGTCTGTTAGACTGCGAAA
ATTGGGTCCGTTTTCGTGGCTTGCCTAAAACGCGGAAATCACGCAAAGTC
CGCTTACTACACCATTGCTATGTCTATCTACGTATCTTCCAGGAGAGCAC
CTCCGTCCTCCCGGTGTCCCACGTAGAGATAGAATCCGACCATGCATCCC
CCGATACTGTGCGCTCCATCGCCACGACTCGCTCGTTCCGGCTTCGGCAA
TGGGAAGGTCGTTTGGACCAGCGGATGAGTGAATTGAAGGAGCAGCACCA
GGGGGAGAATGATTTGCACTTGGAAATTCCGGGCCGGTGGGACTCGACCA
TGTACCCGCAGGTCTTTGGTCTGCCAGAATCTCTACTATTCCTACTATCA
CAGGTAACGAGACTGGGCAATGAGCGAGACCTATCGGACTTGGGGAGCTA
TACGGGCGCGCTGGATTTTAGGCAGTTCTCCGCGCGGGCGCGGAGTCTGG
AGCGATGCATTTCTACTTGGCGACCACCTTCTTTACCAGATGCAGATCCA
CAAAGCATCATCGCTCAGACAAACGCTACCGTTGTCCGCCTGATGCTCTC
AGTCCTCCACAAAGCTCTTCTTATCTTCTTTTACCGTCGGATCTACGACG
TGGACCCGATGATCCTTCAAGACAAAGCGTGGCAAGTCCGGGACGCCTTG
GCTCAGGTAGAAAGAGACGATATGCCGGCGACTCGTATAGCTGCACCATT
TATTTGGGCGGCGTTTATTGCCGCCTGTGAGGCTTTGGATCCTAGTTTGC
AAGACTGGTTTGCAGGCTGGTTCGAGACGTCAGCCAGAAAGAGCGGGCTT
GGGACCTTTAAGCTGGCGCTGAAAATAGCAAGGCAGGTCTGGGAGAGACA
ACGGCAGCCCCTGAATAGCAGCGCCAGCACCAGTTGGCCGCAGATTATGC
GGGAAAGCAACCTGAGTTTGTTCTACATATAA

Coding sequence (CDS) from alignment at An12:2353777..2355958+

>CBS51388_008171-T1 ID=CBS51388_008171-T1|Name=CBS51388_008171-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3972bp|location=Sequence derived from alignment at An12:2353777..2355958+ (Aspergillus niger CBS 513.88)
ATGACATCAGGGGCCGTCGTCACTACCACTGAGGCCCCTGCTCGCTCTGG
CAAGCCAACTGACACCCCAGTGCGCTCTCGTTCCTTGGGAGGATGCGAGA
CCTGTCGTCGGCGCCATGCTAAGTGTGATGAGACTCGGCCATCATGTCTC
GTGTGTAAGCGTGCGGGGCTCGTCTGTGAGAGGTACGAGATCCGGCTGTT
GTTCGATGCGAGCGACAGTCAGAGCTCACGATGTCGCCGTCCTCTGTTCA
CCGAGGATATGCGTCAGCGCATGAGTGAGCAGTTGACCGACAGCTTGGAC
TTGGATGATGTCCATACCATCCTGACCAAGATTGATGATCAATGCGAGGG
CCAGGAGGGAGATACTAATTCCAGTTTTACTACCCGCATGGGTCCCTTTG
GTGCCTTTCGGGTGGTTCGAGCTGAGATGGACCTTCCCGAATCCCCAATG
GACCCAGTCGACGAGCCCCTTCCTCAGGTGGAAGACAACCCAGTAAATGC
TGGGCTGGAAATGTCTTTGGATGATGCATTTAGCAATGATCCCCTCATGG
AGTGTCTGTTTGGCCATGTGAACGTAGATGTTACTGCCGACTTGGATGCT
CATGACTTCTTCGCCGCAACCCTACCTTCAGCCGAAAGTGAAGGAATTTC
CCCACAATCCTTGTCAGGGGGCTTCCTTATGGGACCATCGCCATCAGTTC
CTCTGCAAGCATCGTTATTATCGTCGCCGGAGATCCAATATGCTCCGTCC
GTGACCAACCTGGCCCCGCCAGATGCCCCCTTATTGCTATCTGCATACAC
GAAGAATGTAACTCAGCTGTTCAGCCCAATACAGCTGGAAAAGAGCCCCT
GGAGTATGCTCCATATGCCTCCCGCCATGGAGACCTTAACTTTGTTGACT
ATGGGAGAGCTGGCCAACAACACCAGGATGTCTATCTTCTATGCAATCCT
GGCCACTTCGGCCTTCACCCAGCGTCTATCCTCGTTGACGCGCAGCGCAA
GTCAATATTGGCAGAGACAGGCAGAGACCTTTGCCATCGAAGCCCAGAAT
TATCTCAAACGAGCGCTACATGATGCATCATCGAGCGCCAAAAAAGTCAA
GTACAAAGACGTCCTTATCGCCTTGCTGTGCATGAACACGGTTTCGGAGA
GCACCTCCGTCCTCCCGGTGTCCCACGTAGAGATAGAATCCGACCATGCA
TCCCCCGATACTGTGCGCTCCATCGCCACGACTCGCTCGTTCCGGCTTCG
GCAATGGGAAGGTCGTTTGGACCAGCGGATGAGTGAATTGAAGGAGCAGC
ACCAGGGGGAGAATGATTTGCACTTGGAAATTCCGGGCCGGTGGGACTCG
ACCATGTACCCGCAGGTCTTTGGTCTGCCAGAATCTCTACTATTCCTACT
ATCACAGGTAACGAGACTGGGCAATGAGCGAGACCTATCGGACTTGGGGA
GCTATACGGGCGCGCTGGATTTTAGGCAGTTCTCCGCGCGGGCGCGGAGT
CTGGAGCGATGCATTTCTACTTGGCGACCACCTTCTTTACCAGATGCAGA
TCCACAAAGCATCATCGCTCAGACAAACGCTACCGTTGTCCGCCTGATGC
TCTCAGTCCTCCACAAAGCTCTTCTTATCTTCTTTTACCGTCGGATCTAC
GACGTGGACCCGATGATCCTTCAAGACAAAGCGTGGCAAGTCCGGGACGC
CTTGGCTCAGGTAGAAAGAGACGATATGCCGGCGACTCGTATAGCTGCAC
CATTTATTTGGGCGGCGTTTATTGCCGCCTGTGAGGCTTTGGATCCTAGT
TTGCAAGACTGGTTTGCAGGCTGGTTCGAGACGTCAGCCAGAAAGAGCGG
GCTTGGGACCTTTAAGCTGGCGCTGAAAATAGCAAGGCAGGTCTGGGAGA
GACAACGGCAGCCCCTGAATAGCAGCGCCAGCACCAGTTGGCCGCAGATT
ATGCGGGAAAGCAACCTGAGTTTGTTCTACATATAAATGACATCAGGGGC
CGTCGTCACTACCACTGAGGCCCCTGCTCGCTCTGGCAAGCCAACTGACA
CCCCAGTGCGCTCTCGTTCCTTGGGAGGATGCGAGACCTGTCGTCGGCGC
CATGCTAAGTGTGATGAGACTCGGCCATCATGTCTCGTGTGTAAGCGTGC
GGGGCTCGTCTGTGAGAGGTACGAGATCCGGCTGTTGTTCGATGCGAGCG
ACAGTCAGAGCTCACGATGTCGCCGTCCTCTGTTCACCGAGGATATGCGT
CAGCGCATGAGTGAGCAGTTGACCGACAGCTTGGACTTGGATGATGTCCA
TACCATCCTGACCAAGATTGATGATCAATGCGAGGGCCAGGAGGGAGATA
CTAATTCCAGTTTTACTACCCGCATGGGTCCCTTTGGTGCCTTTCGGGTG
GTTCGAGCTGAGATGGACCTTCCCGAATCCCCAATGGACCCAGTCGACGA
GCCCCTTCCTCAGGTGGAAGACAACCCAGTAAATGCTGGGCTGGAAATGT
CTTTGGATGATGCATTTAGCAATGATCCCCTCATGGAGTGTCTGTTTGGC
CATGTGAACGTAGATGTTACTGCCGACTTGGATGCTCATGACTTCTTCGC
CGCAACCCTACCTTCAGCCGAAAGTGAAGGAATTTCCCCACAATCCTTGT
CAGGGGGCTTCCTTATGGGACCATCGCCATCAGTTCCTCTGCAAGCATCG
TTATTATCGTCGCCGGAGATCCAATATGCTCCGTCCGTGACCAACCTGGC
CCCGCCAGATGCCCCCTTATTGCTATCTGCATACACGAAGAATGTAACTC
AGCTGTTCAGCCCAATACAGCTGGAAAAGAGCCCCTGGAGTATGCTCCAT
ATGCCTCCCGCCATGGAGACCTTAACTTTGTTGACTATGGGAGAGCTGGC
CAACAACACCAGGATGTCTATCTTCTATGCAATCCTGGCCACTTCGGCCT
TCACCCAGCGTCTATCCTCGTTGACGCGCAGCGCAAGTCAATATTGGCAG
AGACAGGCAGAGACCTTTGCCATCGAAGCCCAGAATTATCTCAAACGAGC
GCTACATGATGCATCATCGAGCGCCAAAAAAGTCAAGTACAAAGACGTCC
TTATCGCCTTGCTGTGCATGAACACGGTTTCGGAGAGCACCTCCGTCCTC
CCGGTGTCCCACGTAGAGATAGAATCCGACCATGCATCCCCCGATACTGT
GCGCTCCATCGCCACGACTCGCTCGTTCCGGCTTCGGCAATGGGAAGGTC
GTTTGGACCAGCGGATGAGTGAATTGAAGGAGCAGCACCAGGGGGAGAAT
GATTTGCACTTGGAAATTCCGGGCCGGTGGGACTCGACCATGTACCCGCA
GGTCTTTGGTCTGCCAGAATCTCTACTATTCCTACTATCACAGGTAACGA
GACTGGGCAATGAGCGAGACCTATCGGACTTGGGGAGCTATACGGGCGCG
CTGGATTTTAGGCAGTTCTCCGCGCGGGCGCGGAGTCTGGAGCGATGCAT
TTCTACTTGGCGACCACCTTCTTTACCAGATGCAGATCCACAAAGCATCA
TCGCTCAGACAAACGCTACCGTTGTCCGCCTGATGCTCTCAGTCCTCCAC
AAAGCTCTTCTTATCTTCTTTTACCGTCGGATCTACGACGTGGACCCGAT
GATCCTTCAAGACAAAGCGTGGCAAGTCCGGGACGCCTTGGCTCAGGTAG
AAAGAGACGATATGCCGGCGACTCGTATAGCTGCACCATTTATTTGGGCG
GCGTTTATTGCCGCCTGTGAGGCTTTGGATCCTAGTTTGCAAGACTGGTT
TGCAGGCTGGTTCGAGACGTCAGCCAGAAAGAGCGGGCTTGGGACCTTTA
AGCTGGCGCTGAAAATAGCAAGGCAGGTCTGGGAGAGACAACGGCAGCCC
CTGAATAGCAGCGCCAGCACCAGTTGGCCGCAGATTATGCGGGAAAGCAA
CCTGAGTTTGTTCTACATATAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0042025	host cell nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CBS51388_008171	CBS51388_008171	Aspergillus niger CBS 513.88	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_008171-T1.exon1	CBS51388_008171-T1.exon1	Aspergillus niger CBS 513.88	exon
CBS51388_008171-T1.exon2	CBS51388_008171-T1.exon2	Aspergillus niger CBS 513.88	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_008171-T1.cds	CBS51388_008171-T1.cds	Aspergillus niger CBS 513.88	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_008171-T1	CBS51388_008171-T1-protein	Aspergillus niger CBS 513.88	polypeptide

Properties


Property Name	Value
Note	antiSMASH:Cluster_12.7
DBxref	InterPro:IPR021858
DBxref	InterPro:IPR036864
DBxref	InterPro:IPR001138
DBxref	PFAM:PF00172
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger CBS 513.88 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
An12	supercontig	An12:2353777..2355958 +

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CBS51388_008171-T1, CBS51388_008171-T1 (mRNA) Aspergillus niger CBS 513.88