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CBS51388_008210-T1, CBS51388_008210-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008210-T1
Unique NameCBS51388_008210-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:2463372..2465084+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008210-T1 ID=CBS51388_008210-T1|Name=CBS51388_008210-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1713bp|location=Sequence derived from alignment at An12:2463372..2465084+ (Aspergillus niger CBS 513.88)
ATGGCCGAATCCTCCCATCCCCCTCCCCCGCCATCCGCCGACGACGACCA
CTGGGCGCCCTGGCTGCCCTCCGCATACCCAGATGCTGTTCCAGGCTTGG
TAAACGCGGAGGCGCTCTCATCTCTGTCTCCTTCTTACTCGCAGAATGAT
TGCGGCTCGCTGGACATGCTTTCCTCCGATAACTTCAGGACCTCGCAGCC
GGATCCAACTGACGACACGACGATCATCCCCCCGCCCGATGACTATGTCA
ATGTCTCCCAGTGGCTCGCTGGCGCCTATCGGCCTCCTGTCCCCTGCACC
TACTGTCAGCAACACCGACTGCAGTGCCTTGTCATTCGCACCACCCCGGC
CAATCCGAACCCCGTCACCGCCTGTTCCAGTTGCGTCGCGCTCTTCCGCG
AATGTAGCCTCGCCCGTGGCGAGAAGCGTCACCCTGCAGGCTTCGAGACC
GTTTTTCCCGTGTTCAATCATCTACATGGCGTAACCGAGTGGACCGAGGA
GGAGCTGTTCCCCACTCCGCACGCATTTCCAGTGTCGGCCTCATCAAACG
ACCAGGCGCAATCAGCGCATGACCAGGAAAAAACAGAAGAAGACGTACAG
CAGAAGCCGCGGTTCTCTCGAAAAGGAGCCAAGATATTGCGGGATTGGCT
GTATCGCAATCAACACGCTCCGTATCCCACAGACGAACAGAAAGCTGCGT
TTGCCCAGCAGACCGGCCTCACTGAGAAGCAGATATCTACTTGGTTCGCC
AATGCCCGACGGCGCCACCGAATGGTCCACCGCACCTCCCGACCGAGTCA
GATCTTCCGGAGTGGCTCCCCAATGCCCATTGCCCGGTCGGCGGCCTTGA
CTCCAATGGAACGCTGGCAGCGATCCCCGCCGGACCAAGAGCCTGTATCC
GAGTCGGTTATTCAGCAAGCTATTGCCGCTGCCGACACTGATGCTCCGTG
GAATCACCCCAGCACGTCTGGCAATGCAAGTCCCAGCTCTCACCATTTCG
CGTCCTCCATTTCGAGCATCGACAGTGAAACGTCGCAGGCTTCGTCTGAG
AGTTTCTCATCCGCCTGGAGTCATCAGTCCGAGAGCTATGTGCCGTTCCC
ACTGTCAGATGGGCGGCCGCGATCCCAGTCCCGTCGCAGACGGCCCAGAC
GCCAGTCGGCAGCGGCGAGCCCATACCAGTGTACCTTCTGTGTGGACGGT
TTCAAGAAAAAGCATGATTGGGTCCGTCATGAAAAGAGCGTACACCTGTC
GTTGGAGTCGTGGATATGTAGCGTGGGATCGGGCGTTCTGGATCTGGCCG
GCTTGGAGGTATTACGATGCGATTTCTGCGATTACTCTCCACTTACTGAA
TCACATTTCTCGACCCATGAGTTCGATGTGTGCGCGGATCGTCCGCTATC
GGAACGTTCCTTCCGACGCAAAGACCACTTGATCCAGCACTTTCGCAAAT
TTCATCACTGCACGACGGTCCCCGCCCTACGCATTGAGGCCTGTCGCGTT
GTCACGAACGATGTGCAAAGCCGGTGTGGATTTTGCCAATTAGTCTTGCC
GACGTGGGCAGCACGCGCAGATCATCTGGCGGAGCACTTCAAGAACGGAC
GGCGCATGGCGGACTGGTCGGGGGACTGGGGGCTGGACCCCTTGTACCAG
GCCATGTTGCGAGATGCCGTCTTGCCCGCGGATCGGTTTGTCTACTCCGA
CGGGGGGTCCTGA
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Coding sequence (CDS) from alignment at An12:2463372..2465084+

>CBS51388_008210-T1 ID=CBS51388_008210-T1|Name=CBS51388_008210-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1713bp|location=Sequence derived from alignment at An12:2463372..2465084+ (Aspergillus niger CBS 513.88)
ATGGCCGAATCCTCCCATCCCCCTCCCCCGCCATCCGCCGACGACGACCA
CTGGGCGCCCTGGCTGCCCTCCGCATACCCAGATGCTGTTCCAGGCTTGG
TAAACGCGGAGGCGCTCTCATCTCTGTCTCCTTCTTACTCGCAGAATGAT
TGCGGCTCGCTGGACATGCTTTCCTCCGATAACTTCAGGACCTCGCAGCC
GGATCCAACTGACGACACGACGATCATCCCCCCGCCCGATGACTATGTCA
ATGTCTCCCAGTGGCTCGCTGGCGCCTATCGGCCTCCTGTCCCCTGCACC
TACTGTCAGCAACACCGACTGCAGTGCCTTGTCATTCGCACCACCCCGGC
CAATCCGAACCCCGTCACCGCCTGTTCCAGTTGCGTCGCGCTCTTCCGCG
AATGTAGCCTCGCCCGTGGCGAGAAGCGTCACCCTGCAGGCTTCGAGACC
GTTTTTCCCGTGTTCAATCATCTACATGGCGTAACCGAGTGGACCGAGGA
GGAGCTGTTCCCCACTCCGCACGCATTTCCAGTGTCGGCCTCATCAAACG
ACCAGGCGCAATCAGCGCATGACCAGGAAAAAACAGAAGAAGACGTACAG
CAGAAGCCGCGGTTCTCTCGAAAAGGAGCCAAGATATTGCGGGATTGGCT
GTATCGCAATCAACACGCTCCGTATCCCACAGACGAACAGAAAGCTGCGT
TTGCCCAGCAGACCGGCCTCACTGAGAAGCAGATATCTACTTGGTTCGCC
AATGCCCGACGGCGCCACCGAATGGTCCACCGCACCTCCCGACCGAGTCA
GATCTTCCGGAGTGGCTCCCCAATGCCCATTGCCCGGTCGGCGGCCTTGA
CTCCAATGGAACGCTGGCAGCGATCCCCGCCGGACCAAGAGCCTGTATCC
GAGTCGGTTATTCAGCAAGCTATTGCCGCTGCCGACACTGATGCTCCGTG
GAATCACCCCAGCACGTCTGGCAATGCAAGTCCCAGCTCTCACCATTTCG
CGTCCTCCATTTCGAGCATCGACAGTGAAACGTCGCAGGCTTCGTCTGAG
AGTTTCTCATCCGCCTGGAGTCATCAGTCCGAGAGCTATGTGCCGTTCCC
ACTGTCAGATGGGCGGCCGCGATCCCAGTCCCGTCGCAGACGGCCCAGAC
GCCAGTCGGCAGCGGCGAGCCCATACCAGTGTACCTTCTGTGTGGACGGT
TTCAAGAAAAAGCATGATTGGGTCCGTCATGAAAAGAGCGTACACCTGTC
GTTGGAGTCGTGGATATGTAGCGTGGGATCGGGCGTTCTGGATCTGGCCG
GCTTGGAGGTATTACGATGCGATTTCTGCGATTACTCTCCACTTACTGAA
TCACATTTCTCGACCCATGAGTTCGATGTGTGCGCGGATCGTCCGCTATC
GGAACGTTCCTTCCGACGCAAAGACCACTTGATCCAGCACTTTCGCAAAT
TTCATCACTGCACGACGGTCCCCGCCCTACGCATTGAGGCCTGTCGCGTT
GTCACGAACGATGTGCAAAGCCGGTGTGGATTTTGCCAATTAGTCTTGCC
GACGTGGGCAGCACGCGCAGATCATCTGGCGGAGCACTTCAAGAACGGAC
GGCGCATGGCGGACTGGTCGGGGGACTGGGGGCTGGACCCCTTGTACCAG
GCCATGTTGCGAGATGCCGTCTTGCCCGCGGATCGGTTTGTCTACTCCGA
CGGGGGGTCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008210CBS51388_008210Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008210-T1.exon1CBS51388_008210-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008210-T1.cdsCBS51388_008210-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008210-T1CBS51388_008210-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR017970
DBxrefInterPro:IPR008422
DBxrefInterPro:IPR013087
DBxrefInterPro:IPR001356
DBxrefPFAM:PF00046
DBxrefPFAM:PF05920
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:2463372..2465084 +
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