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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:2478810..2479664- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008214-T1 ID=CBS51388_008214-T1|Name=CBS51388_008214-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=855bp|location=Sequence derived from alignment at An12:2478810..2479664- (Aspergillus niger CBS 513.88)
ATGCCTTCAAATTCCCTGCGCGATAACGTCTCCCGCCGCAAGGATGCCTC
TCCCCTCGGCAGAGGCATCTTCATCGGGCTTCGTGCCCTAGATGTCTGGT
GGCAACACCATCTACTCACCCGCGGATGGGCTACACGAGCCATCGAAACG
CTTGGGGGTCAAGCAGTCTCAACAAGCCATATTATATCTTCTACAAGCTT
TACGGGCCTTCAACCTTACTATGGTCTCGTGAACCTGCTCTCCTTTGGCA
GCAGCATCAAGCAGATTGCGACCATGATCTTCATTTCCGAGCAAGAGACC
CCCGTGGCCTCCGCCATCATTGTCGCCGCATTCAACACTATCGTCAACTC
CGTGAACACTCTTCTGTCTGTTTGGGCTGTCACCTCCCAAGTGCCCAGCA
CCCTATCTTCCAACAAGTCTTCCAACTTCTTACTCGCGAGTCCTCTCGTT
GCCGTGGGCGCAGGCGCATACCTCATCGGGATCCTCACTGAAGCAGTCTC
CGAATTCCAACGGACAGCTTTCAAGAAAGACCCCGCCAACAAAGGCAAGC
CGTATGGCGGCGGACTATTCTCCCTCGCTACGAACATCAACTATGGTGGG
TATACTATTTGGCGTGCTGGCTATGCCCTGGTCACTGGCGGCCTGCCTCT
GGCGGCTATAAACTTTTCTTTCTTCTTCTACGACTTTGCGGCCCGTGGGG
TCCCGGTGTTAGACGCGTATTTGACAGACAGGGTAAGACTTCTTTAACAT
TGACTAAAAGGAGAAGAAAGACTAATGGTCGTTATCTAGTATGGTGACGA
GTACAAGGAGATTAAGTCGCGCGTGAAATATCGTCTCATTCCGGGGATTT
ATTAA back to topCoding sequence (CDS) from alignment at An12:2478810..2479664- >CBS51388_008214-T1 ID=CBS51388_008214-T1|Name=CBS51388_008214-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1596bp|location=Sequence derived from alignment at An12:2478810..2479664- (Aspergillus niger CBS 513.88)
TATGGTGACGAGTACAAGGAGATTAAGTCGCGCGTGAAATATCGTCTCAT
TCCGGGGATTTATTAAATGCCTTCAAATTCCCTGCGCGATAACGTCTCCC
GCCGCAAGGATGCCTCTCCCCTCGGCAGAGGCATCTTCATCGGGCTTCGT
GCCCTAGATGTCTGGTGGCAACACCATCTACTCACCCGCGGATGGGCTAC
ACGAGCCATCGAAACGCTTGGGGGTCAAGCAGTCTCAACAAGCCATATTA
TATCTTCTACAAGCTTTACGGGCCTTCAACCTTACTATGGTCTCGTGAAC
CTGCTCTCCTTTGGCAGCAGCATCAAGCAGATTGCGACCATGATCTTCAT
TTCCGAGCAAGAGACCCCCGTGGCCTCCGCCATCATTGTCGCCGCATTCA
ACACTATCGTCAACTCCGTGAACACTCTTCTGTCTGTTTGGGCTGTCACC
TCCCAAGTGCCCAGCACCCTATCTTCCAACAAGTCTTCCAACTTCTTACT
CGCGAGTCCTCTCGTTGCCGTGGGCGCAGGCGCATACCTCATCGGGATCC
TCACTGAAGCAGTCTCCGAATTCCAACGGACAGCTTTCAAGAAAGACCCC
GCCAACAAAGGCAAGCCGTATGGCGGCGGACTATTCTCCCTCGCTACGAA
CATCAACTATGGTGGGTATACTATTTGGCGTGCTGGCTATGCCCTGGTCA
CTGGCGGCCTGCCTCTGGCGGCTATAAACTTTTCTTTCTTCTTCTACGAC
TTTGCGGCCCGTGGGGTCCCGGTGTTAGACGCGTATTTGACAGACAGGTA
TGGTGACGAGTACAAGGAGATTAAGTCGCGCGTGAAATATCGTCTCATTC
CGGGGATTTATTAAATGCCTTCAAATTCCCTGCGCGATAACGTCTCCCGC
CGCAAGGATGCCTCTCCCCTCGGCAGAGGCATCTTCATCGGGCTTCGTGC
CCTAGATGTCTGGTGGCAACACCATCTACTCACCCGCGGATGGGCTACAC
GAGCCATCGAAACGCTTGGGGGTCAAGCAGTCTCAACAAGCCATATTATA
TCTTCTACAAGCTTTACGGGCCTTCAACCTTACTATGGTCTCGTGAACCT
GCTCTCCTTTGGCAGCAGCATCAAGCAGATTGCGACCATGATCTTCATTT
CCGAGCAAGAGACCCCCGTGGCCTCCGCCATCATTGTCGCCGCATTCAAC
ACTATCGTCAACTCCGTGAACACTCTTCTGTCTGTTTGGGCTGTCACCTC
CCAAGTGCCCAGCACCCTATCTTCCAACAAGTCTTCCAACTTCTTACTCG
CGAGTCCTCTCGTTGCCGTGGGCGCAGGCGCATACCTCATCGGGATCCTC
ACTGAAGCAGTCTCCGAATTCCAACGGACAGCTTTCAAGAAAGACCCCGC
CAACAAAGGCAAGCCGTATGGCGGCGGACTATTCTCCCTCGCTACGAACA
TCAACTATGGTGGGTATACTATTTGGCGTGCTGGCTATGCCCTGGTCACT
GGCGGCCTGCCTCTGGCGGCTATAAACTTTTCTTTCTTCTTCTACGACTT
TGCGGCCCGTGGGGTCCCGGTGTTAGACGCGTATTTGACAGACAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006629 | lipid metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001104 |
| DBxref | InterPro:IPR010721 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:2478810..2479664 - |
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