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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:2479966..2480923+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008215-T1 ID=CBS51388_008215-T1|Name=CBS51388_008215-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=958bp|location=Sequence derived from alignment at An12:2479966..2480923+ (Aspergillus niger CBS 513.88)
ATGACTGCCGTTCTTATCACGGGCGCAACCGGCAAACAAGGGGGTGCCCT
CATCAGGAATCTCCTACTTCGAAAGGCCCCCTTCGAGATCCTCGCCGTCA
CCAGGAACCCATCCTCCTCATCTGCCCAGAAGCTGGCTAGTCTATCTACG
AAAATTAAGCTAGTGGAAGGCGACCTGGATGACCCGGGTGCCATCTTTCG
GAACGCTCAACGCCTGACGACATCTCCCATCTGGGGGTATATAGTGTGCA
GGTATGTGTTTAGATTAGTTCTTGGTATATAGTTCGCCCATATTGACTGT
GTCTGCACTGGCGGCAATCGGAAACAAGGCCGAAGAAACCCAAGGGAAAG
CGTTGATAGACGAATCCATCCGTCAAAAGGTCAAGTTCTTCGTCTACAGT
TCAGTTGACCGCGGCGGTGGGGAGCGCTCGTTCCAAAATCCTACCAAGAT
ACCCCATTTCATCAAGAAACATAATATTGAACATCATCTGGTCGACCGCA
GCAAAAGCGGAAACATGGACTGGGTGGTCTTGCGTCCGATAGCCTTCTTC
GAAAACCTGACTCCGGATTTCTTTGGCAAGGTTTTCACCACATGCTTTAA
GATGGCATTGGCGGGAAAGCCGCTGCAACTTGTCGCCACAAGCGACATCG
GATACTTTGGAGCTGAAGCATTTCTCAATCCGGAAAAGTACAAGGGCAGA
GCGCTTTCACTTGCTGGTGATGAACTGACCTTTGAGGGGATGGGGTTAAT
CTTTGAACAGAAGACTGGACGGCCACTGCCTATGACGTTCCGCCCGGTAT
GCTCGTTATTTATGGCCATGATGAAGGATATGGGATATATGTTCCAGTGG
TTCCGAAATGAGGGATATAAGGCTGATATTCCGAAGTTGAGGGAGATCCA
TCCCGAGATGATGGACTTTGCGATCTGGTTGAAGAAGGAGAGTGGGTTTA
AAAAATAG back to topCoding sequence (CDS) from alignment at An12:2479966..2480923+ >CBS51388_008215-T1 ID=CBS51388_008215-T1|Name=CBS51388_008215-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1854bp|location=Sequence derived from alignment at An12:2479966..2480923+ (Aspergillus niger CBS 513.88)
ATGACTGCCGTTCTTATCACGGGCGCAACCGGCAAACAAGGGGGTGCCCT
CATCAGGAATCTCCTACTTCGAAAGGCCCCCTTCGAGATCCTCGCCGTCA
CCAGGAACCCATCCTCCTCATCTGCCCAGAAGCTGGCTAGTCTATCTACG
AAAATTAAGCTAGTGGAAGGCGACCTGGATGACCCGGGTGCCATCTTTCG
GAACGCTCAACGCCTGACGACATCTCCCATCTGGGGGTATATAGTGTGCA
GTTCGCCCATATTGACTGTGTCTGCACTGGCGGCAATCGGAAACAAGGCC
GAAGAAACCCAAGGGAAAGCGTTGATAGACGAATCCATCCGTCAAAAGGT
CAAGTTCTTCGTCTACAGTTCAGTTGACCGCGGCGGTGGGGAGCGCTCGT
TCCAAAATCCTACCAAGATACCCCATTTCATCAAGAAACATAATATTGAA
CATCATCTGGTCGACCGCAGCAAAAGCGGAAACATGGACTGGGTGGTCTT
GCGTCCGATAGCCTTCTTCGAAAACCTGACTCCGGATTTCTTTGGCAAGG
TTTTCACCACATGCTTTAAGATGGCATTGGCGGGAAAGCCGCTGCAACTT
GTCGCCACAAGCGACATCGGATACTTTGGAGCTGAAGCATTTCTCAATCC
GGAAAAGTACAAGGGCAGAGCGCTTTCACTTGCTGGTGATGAACTGACCT
TTGAGGGGATGGGGTTAATCTTTGAACAGAAGACTGGACGGCCACTGCCT
ATGACGTTCCGCCCGGTATGCTCGTTATTTATGGCCATGATGAAGGATAT
GGGATATATGTTCCAGTGGTTCCGAAATGAGGGATATAAGGCTGATATTC
CGAAGTTGAGGGAGATCCATCCCGAGATGATGGACTTTGCGATCTGGTTG
AAGAAGGAGAGTGGGTTTAAAAAATAGATGACTGCCGTTCTTATCACGGG
CGCAACCGGCAAACAAGGGGGTGCCCTCATCAGGAATCTCCTACTTCGAA
AGGCCCCCTTCGAGATCCTCGCCGTCACCAGGAACCCATCCTCCTCATCT
GCCCAGAAGCTGGCTAGTCTATCTACGAAAATTAAGCTAGTGGAAGGCGA
CCTGGATGACCCGGGTGCCATCTTTCGGAACGCTCAACGCCTGACGACAT
CTCCCATCTGGGGGTATATAGTGTGCAGTTCGCCCATATTGACTGTGTCT
GCACTGGCGGCAATCGGAAACAAGGCCGAAGAAACCCAAGGGAAAGCGTT
GATAGACGAATCCATCCGTCAAAAGGTCAAGTTCTTCGTCTACAGTTCAG
TTGACCGCGGCGGTGGGGAGCGCTCGTTCCAAAATCCTACCAAGATACCC
CATTTCATCAAGAAACATAATATTGAACATCATCTGGTCGACCGCAGCAA
AAGCGGAAACATGGACTGGGTGGTCTTGCGTCCGATAGCCTTCTTCGAAA
ACCTGACTCCGGATTTCTTTGGCAAGGTTTTCACCACATGCTTTAAGATG
GCATTGGCGGGAAAGCCGCTGCAACTTGTCGCCACAAGCGACATCGGATA
CTTTGGAGCTGAAGCATTTCTCAATCCGGAAAAGTACAAGGGCAGAGCGC
TTTCACTTGCTGGTGATGAACTGACCTTTGAGGGGATGGGGTTAATCTTT
GAACAGAAGACTGGACGGCCACTGCCTATGACGTTCCGCCCGGTATGCTC
GTTATTTATGGCCATGATGAAGGATATGGGATATATGTTCCAGTGGTTCC
GAAATGAGGGATATAAGGCTGATATTCCGAAGTTGAGGGAGATCCATCCC
GAGATGATGGACTTTGCGATCTGGTTGAAGAAGGAGAGTGGGTTTAAAAA
ATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF05368 |
| DBxref | PFAM:PF13460 |
| DBxref | PFAM:PF01370 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:2479966..2480923 + |
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