You are here

Home

CBS51388_008218-T1, CBS51388_008218-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008218-T1
Unique NameCBS51388_008218-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:2485050..2486293-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008218-T1 ID=CBS51388_008218-T1|Name=CBS51388_008218-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1244bp|location=Sequence derived from alignment at An12:2485050..2486293- (Aspergillus niger CBS 513.88)
ATGGCGCACTCTTCCACCAATACTGCAATCCCCAAAGGCTCTTGGATTTT
AGTCACTGGCGTTAATGGCTATGTGGCCTCTCACACGGCGAGCCAACTCC
TACGGCAAGGCTACCGAGTCCGTGGAACTGTCCGGAATCCATCCAAGAAC
CAATGGGTCGAAGACCTGTTCCATGAGAAATACGGTGCCGACCGATTTGA
GTTGGTCAAGGTTGAGGACATAACTGTGCCTGGTGCTTTCGACGGCGCAG
TCAAAGGTGGGTCTTGCCTCTATTGCGAATTGTGAAAAGTGCCGTATGCT
TCTCAGAAGAACTAATCGACAGCCACAGGGGTTTCTGGCGTGGCTCACGT
CGCAACCATCCTGGGCCACACACCCGACTTAATCACGGGTGTTATCAGTA
CCAATCGGAACCTCCTTGTTAGTGCGGCGAGGGAAGATACCATAAAGCGA
TTCGTATACACCTCCTCATCCGAGGCAGCAACCTTCTCATCCTTCTTGGA
GCACCCAGCGGGGCCAAGCATGCCTATATCTGTGGATACGTGGAATGAAG
AGGCTATCCGGAGAAGCCAGACTAACACGATGGGTCCGAAGGGAGGCTTC
GACATGTATGCCGCCAGCAAGACGCGAGGCGAGCAGGAGATATGGAAGTG
GGCTGAAGAGAATCGTCCACGATTCGTTATAAATACCGGTAGGTCAAAAG
CACTCCATGAAGTGCCCTAAACCCTGACTAAACCCATGGTATGCAGTCTT
ACCTTCCGTATGCTTCGGGGCCTCCATTGATGCGAAATCCCAGGGCCATG
CGTCATCCTCTGCTTGGCCAGCAGCTATCTTCCGTAACCAATTTGATCAA
GTCTGGCCGTTCCTGAGGCACGTCATACCTACAGGTACTATAATTCTGTT
TCACAAAAATCGGGCGTTCAAGCTGATGTGGACTGACAGGAGCCTACTGC
GTTGATGCGGAGGATGTCGCACTTCTCCATGTGGCGGGTCTCACACTCCC
GGACGTGAAGAATGAGCGAATCTTCGCTTTTGGGAACCCTTTTACATGGA
ACGAAGTCATATACATCTTTCGAAAGGCTTTCCCCGATCGTGACTTTCCA
AGCGCACTACCAGGTGCAGACAAAAGGATCCCTTATGACATCGGTCCGGA
TGCCCGCGCCCAGGATCTACTGAAGGAAATGGGAAAGCCTGGATGGTCTA
CCTTGGAGGACACTTTGATGACGAATGTGTCAGACATGCTGTAG
back to top

Coding sequence (CDS) from alignment at An12:2485050..2486293-

>CBS51388_008218-T1 ID=CBS51388_008218-T1|Name=CBS51388_008218-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4260bp|location=Sequence derived from alignment at An12:2485050..2486293- (Aspergillus niger CBS 513.88)
GAGCCTACTGCGTTGATGCGGAGGATGTCGCACTTCTCCATGTGGCGGGT
CTCACACTCCCGGACGTGAAGAATGAGCGAATCTTCGCTTTTGGGAACCC
TTTTACATGGAACGAAGTCATATACATCTTTCGAAAGGCTTTCCCCGATC
GTGACTTTCCAAGCGCACTACCAGGTGCAGACAAAAGGATCCCTTATGAC
ATCGGTCCGGATGCCCGCGCCCAGGATCTACTGAAGGAAATGGGAAAGCC
TGGATGGTCTACCTTGGAGGACACTTTGATGACGAATGTGTCAGACATGC
TGTAGTCTTACCTTCCGTATGCTTCGGGGCCTCCATTGATGCGAAATCCC
AGGGCCATGCGTCATCCTCTGCTTGGCCAGCAGCTATCTTCCGTAACCAA
TTTGATCAAGTCTGGCCGTTCCTGAGGCACGTCATACCTACAGCCACAGG
GGTTTCTGGCGTGGCTCACGTCGCAACCATCCTGGGCCACACACCCGACT
TAATCACGGGTGTTATCAGTACCAATCGGAACCTCCTTGTTAGTGCGGCG
AGGGAAGATACCATAAAGCGATTCGTATACACCTCCTCATCCGAGGCAGC
AACCTTCTCATCCTTCTTGGAGCACCCAGCGGGGCCAAGCATGCCTATAT
CTGTGGATACGTGGAATGAAGAGGCTATCCGGAGAAGCCAGACTAACACG
ATGGGTCCGAAGGGAGGCTTCGACATGTATGCCGCCAGCAAGACGCGAGG
CGAGCAGGAGATATGGAAGTGGGCTGAAGAGAATCGTCCACGATTCGTTA
TAAATACCGATGGCGCACTCTTCCACCAATACTGCAATCCCCAAAGGCTC
TTGGATTTTAGTCACTGGCGTTAATGGCTATGTGGCCTCTCACACGGCGA
GCCAACTCCTACGGCAAGGCTACCGAGTCCGTGGAACTGTCCGGAATCCA
TCCAAGAACCAATGGGTCGAAGACCTGTTCCATGAGAAATACGGTGCCGA
CCGATTTGAGTTGGTCAAGGTTGAGGACATAACTGTGCCTGGTGCTTTCG
ACGGCGCAGTCAAAGGAGCCTACTGCGTTGATGCGGAGGATGTCGCACTT
CTCCATGTGGCGGGTCTCACACTCCCGGACGTGAAGAATGAGCGAATCTT
CGCTTTTGGGAACCCTTTTACATGGAACGAAGTCATATACATCTTTCGAA
AGGCTTTCCCCGATCGTGACTTTCCAAGCGCACTACCAGGTGCAGACAAA
AGGATCCCTTATGACATCGGTCCGGATGCCCGCGCCCAGGATCTACTGAA
GGAAATGGGAAAGCCTGGATGGTCTACCTTGGAGGACACTTTGATGACGA
ATGTGTCAGACATGCTGTAGTCTTACCTTCCGTATGCTTCGGGGCCTCCA
TTGATGCGAAATCCCAGGGCCATGCGTCATCCTCTGCTTGGCCAGCAGCT
ATCTTCCGTAACCAATTTGATCAAGTCTGGCCGTTCCTGAGGCACGTCAT
ACCTACAGCCACAGGGGTTTCTGGCGTGGCTCACGTCGCAACCATCCTGG
GCCACACACCCGACTTAATCACGGGTGTTATCAGTACCAATCGGAACCTC
CTTGTTAGTGCGGCGAGGGAAGATACCATAAAGCGATTCGTATACACCTC
CTCATCCGAGGCAGCAACCTTCTCATCCTTCTTGGAGCACCCAGCGGGGC
CAAGCATGCCTATATCTGTGGATACGTGGAATGAAGAGGCTATCCGGAGA
AGCCAGACTAACACGATGGGTCCGAAGGGAGGCTTCGACATGTATGCCGC
CAGCAAGACGCGAGGCGAGCAGGAGATATGGAAGTGGGCTGAAGAGAATC
GTCCACGATTCGTTATAAATACCGATGGCGCACTCTTCCACCAATACTGC
AATCCCCAAAGGCTCTTGGATTTTAGTCACTGGCGTTAATGGCTATGTGG
CCTCTCACACGGCGAGCCAACTCCTACGGCAAGGCTACCGAGTCCGTGGA
ACTGTCCGGAATCCATCCAAGAACCAATGGGTCGAAGACCTGTTCCATGA
GAAATACGGTGCCGACCGATTTGAGTTGGTCAAGGTTGAGGACATAACTG
TGCCTGGTGCTTTCGACGGCGCAGTCAAAGGAGCCTACTGCGTTGATGCG
GAGGATGTCGCACTTCTCCATGTGGCGGGTCTCACACTCCCGGACGTGAA
GAATGAGCGAATCTTCGCTTTTGGGAACCCTTTTACATGGAACGAAGTCA
TATACATCTTTCGAAAGGCTTTCCCCGATCGTGACTTTCCAAGCGCACTA
CCAGGTGCAGACAAAAGGATCCCTTATGACATCGGTCCGGATGCCCGCGC
CCAGGATCTACTGAAGGAAATGGGAAAGCCTGGATGGTCTACCTTGGAGG
ACACTTTGATGACGAATGTGTCAGACATGCTGTAGTCTTACCTTCCGTAT
GCTTCGGGGCCTCCATTGATGCGAAATCCCAGGGCCATGCGTCATCCTCT
GCTTGGCCAGCAGCTATCTTCCGTAACCAATTTGATCAAGTCTGGCCGTT
CCTGAGGCACGTCATACCTACAGCCACAGGGGTTTCTGGCGTGGCTCACG
TCGCAACCATCCTGGGCCACACACCCGACTTAATCACGGGTGTTATCAGT
ACCAATCGGAACCTCCTTGTTAGTGCGGCGAGGGAAGATACCATAAAGCG
ATTCGTATACACCTCCTCATCCGAGGCAGCAACCTTCTCATCCTTCTTGG
AGCACCCAGCGGGGCCAAGCATGCCTATATCTGTGGATACGTGGAATGAA
GAGGCTATCCGGAGAAGCCAGACTAACACGATGGGTCCGAAGGGAGGCTT
CGACATGTATGCCGCCAGCAAGACGCGAGGCGAGCAGGAGATATGGAAGT
GGGCTGAAGAGAATCGTCCACGATTCGTTATAAATACCGATGGCGCACTC
TTCCACCAATACTGCAATCCCCAAAGGCTCTTGGATTTTAGTCACTGGCG
TTAATGGCTATGTGGCCTCTCACACGGCGAGCCAACTCCTACGGCAAGGC
TACCGAGTCCGTGGAACTGTCCGGAATCCATCCAAGAACCAATGGGTCGA
AGACCTGTTCCATGAGAAATACGGTGCCGACCGATTTGAGTTGGTCAAGG
TTGAGGACATAACTGTGCCTGGTGCTTTCGACGGCGCAGTCAAAGGAGCC
TACTGCGTTGATGCGGAGGATGTCGCACTTCTCCATGTGGCGGGTCTCAC
ACTCCCGGACGTGAAGAATGAGCGAATCTTCGCTTTTGGGAACCCTTTTA
CATGGAACGAAGTCATATACATCTTTCGAAAGGCTTTCCCCGATCGTGAC
TTTCCAAGCGCACTACCAGGTGCAGACAAAAGGATCCCTTATGACATCGG
TCCGGATGCCCGCGCCCAGGATCTACTGAAGGAAATGGGAAAGCCTGGAT
GGTCTACCTTGGAGGACACTTTGATGACGAATGTGTCAGACATGCTGTAG
TCTTACCTTCCGTATGCTTCGGGGCCTCCATTGATGCGAAATCCCAGGGC
CATGCGTCATCCTCTGCTTGGCCAGCAGCTATCTTCCGTAACCAATTTGA
TCAAGTCTGGCCGTTCCTGAGGCACGTCATACCTACAGCCACAGGGGTTT
CTGGCGTGGCTCACGTCGCAACCATCCTGGGCCACACACCCGACTTAATC
ACGGGTGTTATCAGTACCAATCGGAACCTCCTTGTTAGTGCGGCGAGGGA
AGATACCATAAAGCGATTCGTATACACCTCCTCATCCGAGGCAGCAACCT
TCTCATCCTTCTTGGAGCACCCAGCGGGGCCAAGCATGCCTATATCTGTG
GATACGTGGAATGAAGAGGCTATCCGGAGAAGCCAGACTAACACGATGGG
TCCGAAGGGAGGCTTCGACATGTATGCCGCCAGCAAGACGCGAGGCGAGC
AGGAGATATGGAAGTGGGCTGAAGAGAATCGTCCACGATTCGTTATAAAT
ACCGATGGCGCACTCTTCCACCAATACTGCAATCCCCAAAGGCTCTTGGA
TTTTAGTCACTGGCGTTAATGGCTATGTGGCCTCTCACACGGCGAGCCAA
CTCCTACGGCAAGGCTACCGAGTCCGTGGAACTGTCCGGAATCCATCCAA
GAACCAATGGGTCGAAGACCTGTTCCATGAGAAATACGGTGCCGACCGAT
TTGAGTTGGTCAAGGTTGAGGACATAACTGTGCCTGGTGCTTTCGACGGC
GCAGTCAAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008218CBS51388_008218Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008218-T1CBS51388_008218-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008218-T1.cdsCBS51388_008218-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008218-T1.exon4CBS51388_008218-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_008218-T1.exon3CBS51388_008218-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_008218-T1.exon2CBS51388_008218-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008218-T1.exon1CBS51388_008218-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR001509
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
DBxrefPFAM:PF01370
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:2485050..2486293 -
Powered by Drupal