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CBS51388_008219-T1, CBS51388_008219-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008219-T1
Unique NameCBS51388_008219-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:2486627..2487765+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008219-T1 ID=CBS51388_008219-T1|Name=CBS51388_008219-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1139bp|location=Sequence derived from alignment at An12:2486627..2487765+ (Aspergillus niger CBS 513.88)
ATGGACAGCGCTTCAACTACACGTAGTTGCCGGCGTTGTAGCCAGAAAAA
GATACGATGTGACAAATCCCAGCCTTGCGCGAGTTGCATCAAGTCGGCCT
CGGAGTGCATCTTCCCAGGTCCCGGCCGAGCCCAACGACGAAAGAAACGG
CCACTGAAGGCTCAACTTGTGTCGCGGCTGAAGAGCCTGGAGAAGGAGGT
GCAGGTTTTGACTCACAAGCTGGAGGCTGTGAATCAGAGGTCGAAACAGC
ATCCCCTGACGACAGACAATAGAGGCGCCGTAGAAGGCGAGCATGGGAAA
TTGTTAGTGGACAGAGAATCCATCCACTATATCAACCACCAGGTTCTTGT
TAATCTAGCAACCCAGGTTGGTAGGCTTTACAAGCATAACACTTCCGATA
CTGACACAGGGCTCCTTGGCGAGCCGTGACAGACGAACGAAGATAGCGAA
CACTTTAAGCATCGTCTCGAGAAGGGGGAGGATGAATCTGCGGTGCAAGA
AGTGGCATCAATCGGCAGGGAGTGTGAATTGGCGACCGGGAATCAATTTG
TGTTTCAGTATTCGTCGATGGCAGTTTCCCTGTCCGACTTCTACCCCAGC
AGCGCCCATCACCGTATCTTATGGAACTTATTCGAGGAGAATGTAGCCCC
GCTGGCTATGATCTTTCATAAACCGTGGCTTACTAGCATCTTGAACAGTG
CAGGTGCAACGGCTATCGTGGATGACAAGGCTTTCGAGGCTGTGAGGTTT
GCCGTCTACTTTGCTGCCACTACCAGCATGAGCCCAGAGCAGTGTACTGA
AACATCCAGCCAGGGCAGTCATCCCTGCAGCGATACTACCGGTTTGCCAC
ACAGCAAGCATTGGCGCGTGCCAATTTCCTCCAGTCGCAGAGCCTGGCCG
TGCTTCAGGCAACGACCCTCTTCTTAACTTGTTTGCGTGGGGCAGATGAT
GCCGCCTTCGTCCGGGCTACGACAGCGGCTATACATCGCATCGCACAGGG
ACTCGGGTTACATCGCGATGGTACCTACCCCGGACTGAGCCCTTTCGAAA
CCGAGGTACGGCGGCGGCTCTGGTGGACCATATACTTGTTAGACTGCCAG
TCTTCCGAGTTTCGTGCTTATCGGTCGGTATTCAAATAA
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Coding sequence (CDS) from alignment at An12:2486627..2487765+

>CBS51388_008219-T1 ID=CBS51388_008219-T1|Name=CBS51388_008219-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3015bp|location=Sequence derived from alignment at An12:2486627..2487765+ (Aspergillus niger CBS 513.88)
ATGGACAGCGCTTCAACTACACGTAGTTGCCGGCGTTGTAGCCAGAAAAA
GATACGATGTGACAAATCCCAGCCTTGCGCGAGTTGCATCAAGTCGGCCT
CGGAGTGCATCTTCCCAGGTCCCGGCCGAGCCCAACGACGAAAGAAACGG
CCACTGAAGGCTCAACTTGTGTCGCGGCTGAAGAGCCTGGAGAAGGAGGT
GCAGGTTTTGACTCACAAGCTGGAGGCTGTGAATCAGAGGTCGAAACAGC
ATCCCCTGACGACAGACAATAGAGGCGCCGTAGAAGGCGAGCATGGGAAA
TTGTTAGTGGACAGAGAATCCATCCACTATATCAACCACCAGGTTCTTGT
TAATCTAGCAACCCAGACGAACGAAGATAGCGAACACTTTAAGCATCGTC
TCGAGAAGGGGGAGGATGAATCTGCGGTGCAAGAAGTGGCATCAATCGGC
AGGGAGTGTGAATTGGCGACCGGGAATCAATTTGTGTTTCAGTATTCGTC
GATGGCAGTTTCCCTGTCCGACTTCTACCCCAGCAGCGCCCATCACCGTA
TCTTATGGAACTTATTCGAGGAGAATGTAGCCCCGCTGGCTATGATCTTT
CATAAACCGTGGCTTACTAGCATCTTGAACAGTGCAGGTGCAACGGCTAT
CGTGGATGACAAGGCTTTCGAGGCTCCAGGGCAGTCATCCCTGCAGCGAT
ACTACCGGTTTGCCACACAGCAAGCATTGGCGCGTGCCAATTTCCTCCAG
TCGCAGAGCCTGGCCGTGCTTCAGGCAACGACCCTCTTCTTAACTTGTTT
GCGTGGGGCAGATGATGCCGCCTTCGTCCGGGCTACGACAGCGGCTATAC
ATCGCATCGCACAGGGACTCGGGTTACATCGCGATGGTACCTACCCCGGA
CTGAGCCCTTTCGAAACCGAGGTACGGCGGCGGCTCTGGTGGACCATATA
CTTGTTAGACTGCCAGTCTTCCGAGTTTCGTGCTTATCGGTCGGTATTCA
AATAAATGGACAGCGCTTCAACTACACGTAGTTGCCGGCGTTGTAGCCAG
AAAAAGATACGATGTGACAAATCCCAGCCTTGCGCGAGTTGCATCAAGTC
GGCCTCGGAGTGCATCTTCCCAGGTCCCGGCCGAGCCCAACGACGAAAGA
AACGGCCACTGAAGGCTCAACTTGTGTCGCGGCTGAAGAGCCTGGAGAAG
GAGGTGCAGGTTTTGACTCACAAGCTGGAGGCTGTGAATCAGAGGTCGAA
ACAGCATCCCCTGACGACAGACAATAGAGGCGCCGTAGAAGGCGAGCATG
GGAAATTGTTAGTGGACAGAGAATCCATCCACTATATCAACCACCAGGTT
CTTGTTAATCTAGCAACCCAGACGAACGAAGATAGCGAACACTTTAAGCA
TCGTCTCGAGAAGGGGGAGGATGAATCTGCGGTGCAAGAAGTGGCATCAA
TCGGCAGGGAGTGTGAATTGGCGACCGGGAATCAATTTGTGTTTCAGTAT
TCGTCGATGGCAGTTTCCCTGTCCGACTTCTACCCCAGCAGCGCCCATCA
CCGTATCTTATGGAACTTATTCGAGGAGAATGTAGCCCCGCTGGCTATGA
TCTTTCATAAACCGTGGCTTACTAGCATCTTGAACAGTGCAGGTGCAACG
GCTATCGTGGATGACAAGGCTTTCGAGGCTCCAGGGCAGTCATCCCTGCA
GCGATACTACCGGTTTGCCACACAGCAAGCATTGGCGCGTGCCAATTTCC
TCCAGTCGCAGAGCCTGGCCGTGCTTCAGGCAACGACCCTCTTCTTAACT
TGTTTGCGTGGGGCAGATGATGCCGCCTTCGTCCGGGCTACGACAGCGGC
TATACATCGCATCGCACAGGGACTCGGGTTACATCGCGATGGTACCTACC
CCGGACTGAGCCCTTTCGAAACCGAGGTACGGCGGCGGCTCTGGTGGACC
ATATACTTGTTAGACTGCCAGTCTTCCGAGTTTCGTGCTTATCGGTCGGT
ATTCAAATAAATGGACAGCGCTTCAACTACACGTAGTTGCCGGCGTTGTA
GCCAGAAAAAGATACGATGTGACAAATCCCAGCCTTGCGCGAGTTGCATC
AAGTCGGCCTCGGAGTGCATCTTCCCAGGTCCCGGCCGAGCCCAACGACG
AAAGAAACGGCCACTGAAGGCTCAACTTGTGTCGCGGCTGAAGAGCCTGG
AGAAGGAGGTGCAGGTTTTGACTCACAAGCTGGAGGCTGTGAATCAGAGG
TCGAAACAGCATCCCCTGACGACAGACAATAGAGGCGCCGTAGAAGGCGA
GCATGGGAAATTGTTAGTGGACAGAGAATCCATCCACTATATCAACCACC
AGGTTCTTGTTAATCTAGCAACCCAGACGAACGAAGATAGCGAACACTTT
AAGCATCGTCTCGAGAAGGGGGAGGATGAATCTGCGGTGCAAGAAGTGGC
ATCAATCGGCAGGGAGTGTGAATTGGCGACCGGGAATCAATTTGTGTTTC
AGTATTCGTCGATGGCAGTTTCCCTGTCCGACTTCTACCCCAGCAGCGCC
CATCACCGTATCTTATGGAACTTATTCGAGGAGAATGTAGCCCCGCTGGC
TATGATCTTTCATAAACCGTGGCTTACTAGCATCTTGAACAGTGCAGGTG
CAACGGCTATCGTGGATGACAAGGCTTTCGAGGCTCCAGGGCAGTCATCC
CTGCAGCGATACTACCGGTTTGCCACACAGCAAGCATTGGCGCGTGCCAA
TTTCCTCCAGTCGCAGAGCCTGGCCGTGCTTCAGGCAACGACCCTCTTCT
TAACTTGTTTGCGTGGGGCAGATGATGCCGCCTTCGTCCGGGCTACGACA
GCGGCTATACATCGCATCGCACAGGGACTCGGGTTACATCGCGATGGTAC
CTACCCCGGACTGAGCCCTTTCGAAACCGAGGTACGGCGGCGGCTCTGGT
GGACCATATACTTGTTAGACTGCCAGTCTTCCGAGTTTCGTGCTTATCGG
TCGGTATTCAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008219CBS51388_008219Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008219-T1.exon1CBS51388_008219-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_008219-T1.exon2CBS51388_008219-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008219-T1.exon3CBS51388_008219-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008219-T1.cdsCBS51388_008219-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008219-T1CBS51388_008219-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:2486627..2487765 +
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