|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:2491354..2492432- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008221-T1 ID=CBS51388_008221-T1|Name=CBS51388_008221-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1079bp|location=Sequence derived from alignment at An12:2491354..2492432- (Aspergillus niger CBS 513.88)
ATGACTGGCGAATACGTCAAGGATCAACCCGCTGGGTTCAGCAACCGTAT
TCAGCGCATTGCCATCGTCGGGGTAAGCCCCCTGTGCCCGTCTGTGCCAT
CCACATCACTAACCACAAGTCTGATTGCCAGGCTGGGGGCACCGTCGGAA
GGCCCATCACCGAGGAACTGCTGCGGACTGGACAGCATAGCGTGACAGCC
CTGACCCGCATCGGCAGTACGAGCCAGGTGCCTTCCGGCGTCCAGTCCAT
TGCCGTGGACTACGATGACGAGGCCAGTCTAGTACGCGCTCTACAGGGCC
ACGACTGCCTGATCATCAGCCTGTCAGTGCAGACCCCTCGCGATACTCAG
CCAAAGCTGCTGCAGGCTGCCTCTCAGGCTGGTATCCGGCATGTGATGCC
AAATGTCTGGGGCTGTGATGTCATGCACCCGCCGTTAGCCGACAGTGGCC
TGAACTGGGGAGGGTTCCGCGAACTCGTGGCCGGCATCGAGGCCAAGGGC
ATGGGGTGGACCGCGCTGATCTGTGGATTCTGGTATGAGCACAGCCTGGT
ACTGGGACCGAGTGCATTCGGCTTCGATCTTCCCGCCAAGAAGCTCATCC
TGAACGACGACGGCAACACCAAGATCAATATCAGCACCCTAGCCCAGTGT
GGCCGAGCCGTGTCCACCCTTCTGAGCCTTCCGGTGCTCCCGGAAGATGA
ACAAGATGACCAGCTGACCCTGAGTCGGTGGCGGAACAAGCCGGTGTATA
TTTCCAGTTTCCTGCTCAGTCAGCGAGACATGCTAGCAAGTTGGCTCCGA
GTGACGGGCGAGACGGCGGACAGTTGGACGATTGAGCAGGAATCCTCTCA
GGGTCGGTACGAGCGCGGATTGGAGTTGATGAAGAAGGGCGACCATGCGG
GATTGCTGCTGGCCATGTACTCGCGGGTCCTTTTTCCCAACGGCGATGGC
AACCACGAGCAGCGTCGGGGGCTAGACAATGACCTGCTGCGACTTCCCAC
GGAGGATTTGGATGAACACACGCGCCAGGCCAAGGCCATGTCTGACCGGG
GATACAATTATATGACAAACCGCAATTGA back to topCoding sequence (CDS) from alignment at An12:2491354..2492432- >CBS51388_008221-T1 ID=CBS51388_008221-T1|Name=CBS51388_008221-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2040bp|location=Sequence derived from alignment at An12:2491354..2492432- (Aspergillus niger CBS 513.88)
GCTGGGGGCACCGTCGGAAGGCCCATCACCGAGGAACTGCTGCGGACTGG
ACAGCATAGCGTGACAGCCCTGACCCGCATCGGCAGTACGAGCCAGGTGC
CTTCCGGCGTCCAGTCCATTGCCGTGGACTACGATGACGAGGCCAGTCTA
GTACGCGCTCTACAGGGCCACGACTGCCTGATCATCAGCCTGTCAGTGCA
GACCCCTCGCGATACTCAGCCAAAGCTGCTGCAGGCTGCCTCTCAGGCTG
GTATCCGGCATGTGATGCCAAATGTCTGGGGCTGTGATGTCATGCACCCG
CCGTTAGCCGACAGTGGCCTGAACTGGGGAGGGTTCCGCGAACTCGTGGC
CGGCATCGAGGCCAAGGGCATGGGGTGGACCGCGCTGATCTGTGGATTCT
GGTATGAGCACAGCCTGGTACTGGGACCGAGTGCATTCGGCTTCGATCTT
CCCGCCAAGAAGCTCATCCTGAACGACGACGGCAACACCAAGATCAATAT
CAGCACCCTAGCCCAGTGTGGCCGAGCCGTGTCCACCCTTCTGAGCCTTC
CGGTGCTCCCGGAAGATGAACAAGATGACCAGCTGACCCTGAGTCGGTGG
CGGAACAAGCCGGTGTATATTTCCAGTTTCCTGCTCAGTCAGCGAGACAT
GCTAGCAAGTTGGCTCCGAGTGACGGGCGAGACGGCGGACAGTTGGACGA
TTGAGCAGGAATCCTCTCAGGGTCGGTACGAGCGCGGATTGGAGTTGATG
AAGAAGGGCGACCATGCGGGATTGCTGCTGGCCATGTACTCGCGGGTCCT
TTTTCCCAACGGCGATGGCAACCACGAGCAGCGTCGGGGGCTAGACAATG
ACCTGCTGCGACTTCCCACGGAGGATTTGGATGAACACACGCGCCAGGCC
AAGGCCATGTCTGACCGGGGATACAATTATATGACAAACCGCAATTGAAT
GACTGGCGAATACGTCAAGGATCAACCCGCTGGGTTCAGCAACCGTATTC
AGCGCATTGCCATCGTCGGGGCTGGGGGCACCGTCGGAAGGCCCATCACC
GAGGAACTGCTGCGGACTGGACAGCATAGCGTGACAGCCCTGACCCGCAT
CGGCAGTACGAGCCAGGTGCCTTCCGGCGTCCAGTCCATTGCCGTGGACT
ACGATGACGAGGCCAGTCTAGTACGCGCTCTACAGGGCCACGACTGCCTG
ATCATCAGCCTGTCAGTGCAGACCCCTCGCGATACTCAGCCAAAGCTGCT
GCAGGCTGCCTCTCAGGCTGGTATCCGGCATGTGATGCCAAATGTCTGGG
GCTGTGATGTCATGCACCCGCCGTTAGCCGACAGTGGCCTGAACTGGGGA
GGGTTCCGCGAACTCGTGGCCGGCATCGAGGCCAAGGGCATGGGGTGGAC
CGCGCTGATCTGTGGATTCTGGTATGAGCACAGCCTGGTACTGGGACCGA
GTGCATTCGGCTTCGATCTTCCCGCCAAGAAGCTCATCCTGAACGACGAC
GGCAACACCAAGATCAATATCAGCACCCTAGCCCAGTGTGGCCGAGCCGT
GTCCACCCTTCTGAGCCTTCCGGTGCTCCCGGAAGATGAACAAGATGACC
AGCTGACCCTGAGTCGGTGGCGGAACAAGCCGGTGTATATTTCCAGTTTC
CTGCTCAGTCAGCGAGACATGCTAGCAAGTTGGCTCCGAGTGACGGGCGA
GACGGCGGACAGTTGGACGATTGAGCAGGAATCCTCTCAGGGTCGGTACG
AGCGCGGATTGGAGTTGATGAAGAAGGGCGACCATGCGGGATTGCTGCTG
GCCATGTACTCGCGGGTCCTTTTTCCCAACGGCGATGGCAACCACGAGCA
GCGTCGGGGGCTAGACAATGACCTGCTGCGACTTCCCACGGAGGATTTGG
ATGAACACACGCGCCAGGCCAAGGCCATGTCTGACCGGGGATACAATTAT
ATGACAAACCGCAATTGAATGACTGGCGAATACGTCAAGGATCAACCCGC
TGGGTTCAGCAACCGTATTCAGCGCATTGCCATCGTCGGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF03435 |
| DBxref | PFAM:PF05368 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:2491354..2492432 - |
|
