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CBS51388_008291-T1, CBS51388_008291-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008291-T1
Unique NameCBS51388_008291-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An13:157941..159812+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008291-T1 ID=CBS51388_008291-T1|Name=CBS51388_008291-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1872bp|location=Sequence derived from alignment at An13:157941..159812+ (Aspergillus niger CBS 513.88)
ATGGCCCCATCATCATCCACGCAGGACCATGCTGACTCTCAGCCTCCGAC
GGTCGCTGCTTTCTCCCCCACCACCATCTCAGGCTCGTCCGTGACATCGA
GACAGCGCTCCAGCATCATCGTGCATCGCAAATCGCCGCTACTGGTGGCC
ACGCCCCCTCAGATCACCCGGGCATTGGCCTACTCGCATCCGTTTATTCT
CCCCTTGAACAAGCTCGTTGGATTGCTCACATGGACGACCGGAGACGGTT
GGCAGAGCTTCCTGCTGGTAGCGGGATTCTGGACGCTGGTTCTCTATGGC
GACGTGATCGTTACTTGGACCGGGCCACTCCTCGTGGTCATTAGCCTTAT
TCTGGGCATGTACTGGAGACGCTACTCCCCGCTGTCGTCGAGGGCTCACT
TGAGTGAGAAGCAAGGCCATCAGAGGGCTGCTTCGGAGACATTTCCTCAT
CGGCATGAAACGTTGGACGAAATAGTCGAGACGCTACGGACATTTACCAC
ACGTTGCAATATTCTCCTGGAGCCACTCGTTGAATTTACCGACTTCTTAT
CCACGCAGAGGACGGCGACTTCTGCCACTACCCGACCAGCTCTTACGACA
TTATTCTTTCGAATCCTCTTCGTGACCCCAATCTGGATCGCCTTGACTCT
TCCGCCGTTGTATCTGATCACCACTCGCCGAGTCATCATGACACTCGGCA
CCATCATTCTCACCTATCACTCTCGCCCGGCAAGAGTATCTCGTGTCATT
CTTTGGCGATCGTTAACAATCCGCCGGATATGCTCTATAATTACGGGGCT
ATCCTTCTCTTCTACTGTTGATAAGGCGCAGTCGCTGTTAATGCAGAGCC
AGGGCCATGCAATGAGCATTGCGACAAGACGTCGAGGAGACTCTTCCGGT
GTAAGATTCACCTTTGTCATCTCTGAAAACCAACGTCGTTGGCTTGGGAT
CGGCTGGACGTACTCTCTGTTCCCTTCCGAGCGAGCTGCTTGGACAGACG
AGCATTTGAACCACGTCCCGTCGAAGGAGGAATTCGAGTTACCCGGTGTC
GCAAACGGCAATGCTCAGTGGCGCTGGGTCGAAGGGAGTGACTGGCGTAT
TGAAGGGGCCGACGAGTCAGGAAAGTCGGATGCCAAAGCCGATGGCGGAG
GCTGGGTCTACTATGACAATAAGGTGGGACACATTGTTTCCCATTTTCTG
ACAAATGTCCAGGTGCCAGGGTTGCTAACAGCATGGGAACAGTGGAATGA
CGGTCGTCGTGGCCAGGATGGTTGGGATCGATACACCCGTCGTCGGAAGT
GGTGTCGTGACGCCGAACTAGTTGAGATTCCGTCAGCGGGCGAGAGCACC
TCAGTGGAGACTAAATCGGGGATCGCTCAATCATTGGAGCAGGAAAAGGC
AGCTAACGCCCATGAAAAAGAAATCTCATCGACGGTCGACGCCGACGCAG
AAAGTCTCGCCCCATCGACCTCATCCAAGTCCCGCAAACGACGTTGGTTT
GGGAGTACGAAGAGTGTAAGCGACAAAGCCAGCAGCATCTCCTCTGCTCC
ACCAACGTCCACGAATAACTCCTCCGTAGATCTCGGAAAATTAAAGTCCG
CCACCCCTACCGGCAGCTACACGCCAACTGGGAAGTCCACCGCAACTGCA
ACCCGACCCATCAGTATTCCGCACGCCCGGAAGATGTCCAATCACTCGGG
AGGCAGCGCCAGTCACAGCAGCAGCTTCGGCCGTGAGGGAAGTATCAGGG
AGAAAGAGATGTCTCTTGCTCAGGATCGTCTGGACCGCTGGGGCACTCGC
GCCACGGGGGGTACTGAACGAGCCGAGCGAGAGATGGGGTTAGGTGATGA
GGTCAATATGGGATTGAGCTGA
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Coding sequence (CDS) from alignment at An13:157941..159812+

>CBS51388_008291-T1 ID=CBS51388_008291-T1|Name=CBS51388_008291-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3606bp|location=Sequence derived from alignment at An13:157941..159812+ (Aspergillus niger CBS 513.88)
ATGGCCCCATCATCATCCACGCAGGACCATGCTGACTCTCAGCCTCCGAC
GGTCGCTGCTTTCTCCCCCACCACCATCTCAGGCTCGTCCGTGACATCGA
GACAGCGCTCCAGCATCATCGTGCATCGCAAATCGCCGCTACTGGTGGCC
ACGCCCCCTCAGATCACCCGGGCATTGGCCTACTCGCATCCGTTTATTCT
CCCCTTGAACAAGCTCGTTGGATTGCTCACATGGACGACCGGAGACGGTT
GGCAGAGCTTCCTGCTGGTAGCGGGATTCTGGACGCTGGTTCTCTATGGC
GACGTGATCGTTACTTGGACCGGGCCACTCCTCGTGGTCATTAGCCTTAT
TCTGGGCATGTACTGGAGACGCTACTCCCCGCTGTCGTCGAGGGCTCACT
TGAGTGAGAAGCAAGGCCATCAGAGGGCTGCTTCGGAGACATTTCCTCAT
CGGCATGAAACGTTGGACGAAATAGTCGAGACGCTACGGACATTTACCAC
ACGTTGCAATATTCTCCTGGAGCCACTCGTTGAATTTACCGACTTCTTAT
CCACGCAGAGGACGGCGACTTCTGCCACTACCCGACCAGCTCTTACGACA
TTATTCTTTCGAATCCTCTTCGTGACCCCAATCTGGATCGCCTTGACTCT
TCCGCCGTTGTATCTGATCACCACTCGCCGAGTCATCATGACACTCGGCA
CCATCATTCTCACCTATCACTCTCGCCCGGCAAGAGTATCTCGTGTCATT
CTTTGGCGATCGTTAACAATCCGCCGGATATGCTCTATAATTACGGGGCT
ATCCTTCTCTTCTACTGTTGATAAGGCGCAGTCGCTGTTAATGCAGAGCC
AGGGCCATGCAATGAGCATTGCGACAAGACGTCGAGGAGACTCTTCCGGT
GTAAGATTCACCTTTGTCATCTCTGAAAACCAACGTCGTTGGCTTGGGAT
CGGCTGGACGTACTCTCTGTTCCCTTCCGAGCGAGCTGCTTGGACAGACG
AGCATTTGAACCACGTCCCGTCGAAGGAGGAATTCGAGTTACCCGGTGTC
GCAAACGGCAATGCTCAGTGGCGCTGGGTCGAAGGGAGTGACTGGCGTAT
TGAAGGGGCCGACGAGTCAGGAAAGTCGGATGCCAAAGCCGATGGCGGAG
GCTGGGTCTACTATGACAATAAGTGGAATGACGGTCGTCGTGGCCAGGAT
GGTTGGGATCGATACACCCGTCGTCGGAAGTGGTGTCGTGACGCCGAACT
AGTTGAGATTCCGTCAGCGGGCGAGAGCACCTCAGTGGAGACTAAATCGG
GGATCGCTCAATCATTGGAGCAGGAAAAGGCAGCTAACGCCCATGAAAAA
GAAATCTCATCGACGGTCGACGCCGACGCAGAAAGTCTCGCCCCATCGAC
CTCATCCAAGTCCCGCAAACGACGTTGGTTTGGGAGTACGAAGAGTGTAA
GCGACAAAGCCAGCAGCATCTCCTCTGCTCCACCAACGTCCACGAATAAC
TCCTCCGTAGATCTCGGAAAATTAAAGTCCGCCACCCCTACCGGCAGCTA
CACGCCAACTGGGAAGTCCACCGCAACTGCAACCCGACCCATCAGTATTC
CGCACGCCCGGAAGATGTCCAATCACTCGGGAGGCAGCGCCAGTCACAGC
AGCAGCTTCGGCCGTGAGGGAAGTATCAGGGAGAAAGAGATGTCTCTTGC
TCAGGATCGTCTGGACCGCTGGGGCACTCGCGCCACGGGGGGTACTGAAC
GAGCCGAGCGAGAGATGGGGTTAGGTGATGAGGTCAATATGGGATTGAGC
TGAATGGCCCCATCATCATCCACGCAGGACCATGCTGACTCTCAGCCTCC
GACGGTCGCTGCTTTCTCCCCCACCACCATCTCAGGCTCGTCCGTGACAT
CGAGACAGCGCTCCAGCATCATCGTGCATCGCAAATCGCCGCTACTGGTG
GCCACGCCCCCTCAGATCACCCGGGCATTGGCCTACTCGCATCCGTTTAT
TCTCCCCTTGAACAAGCTCGTTGGATTGCTCACATGGACGACCGGAGACG
GTTGGCAGAGCTTCCTGCTGGTAGCGGGATTCTGGACGCTGGTTCTCTAT
GGCGACGTGATCGTTACTTGGACCGGGCCACTCCTCGTGGTCATTAGCCT
TATTCTGGGCATGTACTGGAGACGCTACTCCCCGCTGTCGTCGAGGGCTC
ACTTGAGTGAGAAGCAAGGCCATCAGAGGGCTGCTTCGGAGACATTTCCT
CATCGGCATGAAACGTTGGACGAAATAGTCGAGACGCTACGGACATTTAC
CACACGTTGCAATATTCTCCTGGAGCCACTCGTTGAATTTACCGACTTCT
TATCCACGCAGAGGACGGCGACTTCTGCCACTACCCGACCAGCTCTTACG
ACATTATTCTTTCGAATCCTCTTCGTGACCCCAATCTGGATCGCCTTGAC
TCTTCCGCCGTTGTATCTGATCACCACTCGCCGAGTCATCATGACACTCG
GCACCATCATTCTCACCTATCACTCTCGCCCGGCAAGAGTATCTCGTGTC
ATTCTTTGGCGATCGTTAACAATCCGCCGGATATGCTCTATAATTACGGG
GCTATCCTTCTCTTCTACTGTTGATAAGGCGCAGTCGCTGTTAATGCAGA
GCCAGGGCCATGCAATGAGCATTGCGACAAGACGTCGAGGAGACTCTTCC
GGTGTAAGATTCACCTTTGTCATCTCTGAAAACCAACGTCGTTGGCTTGG
GATCGGCTGGACGTACTCTCTGTTCCCTTCCGAGCGAGCTGCTTGGACAG
ACGAGCATTTGAACCACGTCCCGTCGAAGGAGGAATTCGAGTTACCCGGT
GTCGCAAACGGCAATGCTCAGTGGCGCTGGGTCGAAGGGAGTGACTGGCG
TATTGAAGGGGCCGACGAGTCAGGAAAGTCGGATGCCAAAGCCGATGGCG
GAGGCTGGGTCTACTATGACAATAAGTGGAATGACGGTCGTCGTGGCCAG
GATGGTTGGGATCGATACACCCGTCGTCGGAAGTGGTGTCGTGACGCCGA
ACTAGTTGAGATTCCGTCAGCGGGCGAGAGCACCTCAGTGGAGACTAAAT
CGGGGATCGCTCAATCATTGGAGCAGGAAAAGGCAGCTAACGCCCATGAA
AAAGAAATCTCATCGACGGTCGACGCCGACGCAGAAAGTCTCGCCCCATC
GACCTCATCCAAGTCCCGCAAACGACGTTGGTTTGGGAGTACGAAGAGTG
TAAGCGACAAAGCCAGCAGCATCTCCTCTGCTCCACCAACGTCCACGAAT
AACTCCTCCGTAGATCTCGGAAAATTAAAGTCCGCCACCCCTACCGGCAG
CTACACGCCAACTGGGAAGTCCACCGCAACTGCAACCCGACCCATCAGTA
TTCCGCACGCCCGGAAGATGTCCAATCACTCGGGAGGCAGCGCCAGTCAC
AGCAGCAGCTTCGGCCGTGAGGGAAGTATCAGGGAGAAAGAGATGTCTCT
TGCTCAGGATCGTCTGGACCGCTGGGGCACTCGCGCCACGGGGGGTACTG
AACGAGCCGAGCGAGAGATGGGGTTAGGTGATGAGGTCAATATGGGATTG
AGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008291CBS51388_008291Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008291-T1.exon1CBS51388_008291-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_008291-T1.exon2CBS51388_008291-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008291-T1.cdsCBS51388_008291-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008291-T1CBS51388_008291-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010482
DBxrefInterPro:IPR006614
DBxrefPFAM:PF06398
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An13supercontigAn13:157941..159812 +
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