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Sequences
The following sequences are available for this feature:
mRNA from alignment at An13:157941..159812+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008291-T1 ID=CBS51388_008291-T1|Name=CBS51388_008291-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1872bp|location=Sequence derived from alignment at An13:157941..159812+ (Aspergillus niger CBS 513.88) ATGGCCCCATCATCATCCACGCAGGACCATGCTGACTCTCAGCCTCCGAC
GGTCGCTGCTTTCTCCCCCACCACCATCTCAGGCTCGTCCGTGACATCGA
GACAGCGCTCCAGCATCATCGTGCATCGCAAATCGCCGCTACTGGTGGCC
ACGCCCCCTCAGATCACCCGGGCATTGGCCTACTCGCATCCGTTTATTCT
CCCCTTGAACAAGCTCGTTGGATTGCTCACATGGACGACCGGAGACGGTT
GGCAGAGCTTCCTGCTGGTAGCGGGATTCTGGACGCTGGTTCTCTATGGC
GACGTGATCGTTACTTGGACCGGGCCACTCCTCGTGGTCATTAGCCTTAT
TCTGGGCATGTACTGGAGACGCTACTCCCCGCTGTCGTCGAGGGCTCACT
TGAGTGAGAAGCAAGGCCATCAGAGGGCTGCTTCGGAGACATTTCCTCAT
CGGCATGAAACGTTGGACGAAATAGTCGAGACGCTACGGACATTTACCAC
ACGTTGCAATATTCTCCTGGAGCCACTCGTTGAATTTACCGACTTCTTAT
CCACGCAGAGGACGGCGACTTCTGCCACTACCCGACCAGCTCTTACGACA
TTATTCTTTCGAATCCTCTTCGTGACCCCAATCTGGATCGCCTTGACTCT
TCCGCCGTTGTATCTGATCACCACTCGCCGAGTCATCATGACACTCGGCA
CCATCATTCTCACCTATCACTCTCGCCCGGCAAGAGTATCTCGTGTCATT
CTTTGGCGATCGTTAACAATCCGCCGGATATGCTCTATAATTACGGGGCT
ATCCTTCTCTTCTACTGTTGATAAGGCGCAGTCGCTGTTAATGCAGAGCC
AGGGCCATGCAATGAGCATTGCGACAAGACGTCGAGGAGACTCTTCCGGT
GTAAGATTCACCTTTGTCATCTCTGAAAACCAACGTCGTTGGCTTGGGAT
CGGCTGGACGTACTCTCTGTTCCCTTCCGAGCGAGCTGCTTGGACAGACG
AGCATTTGAACCACGTCCCGTCGAAGGAGGAATTCGAGTTACCCGGTGTC
GCAAACGGCAATGCTCAGTGGCGCTGGGTCGAAGGGAGTGACTGGCGTAT
TGAAGGGGCCGACGAGTCAGGAAAGTCGGATGCCAAAGCCGATGGCGGAG
GCTGGGTCTACTATGACAATAAGGTGGGACACATTGTTTCCCATTTTCTG
ACAAATGTCCAGGTGCCAGGGTTGCTAACAGCATGGGAACAGTGGAATGA
CGGTCGTCGTGGCCAGGATGGTTGGGATCGATACACCCGTCGTCGGAAGT
GGTGTCGTGACGCCGAACTAGTTGAGATTCCGTCAGCGGGCGAGAGCACC
TCAGTGGAGACTAAATCGGGGATCGCTCAATCATTGGAGCAGGAAAAGGC
AGCTAACGCCCATGAAAAAGAAATCTCATCGACGGTCGACGCCGACGCAG
AAAGTCTCGCCCCATCGACCTCATCCAAGTCCCGCAAACGACGTTGGTTT
GGGAGTACGAAGAGTGTAAGCGACAAAGCCAGCAGCATCTCCTCTGCTCC
ACCAACGTCCACGAATAACTCCTCCGTAGATCTCGGAAAATTAAAGTCCG
CCACCCCTACCGGCAGCTACACGCCAACTGGGAAGTCCACCGCAACTGCA
ACCCGACCCATCAGTATTCCGCACGCCCGGAAGATGTCCAATCACTCGGG
AGGCAGCGCCAGTCACAGCAGCAGCTTCGGCCGTGAGGGAAGTATCAGGG
AGAAAGAGATGTCTCTTGCTCAGGATCGTCTGGACCGCTGGGGCACTCGC
GCCACGGGGGGTACTGAACGAGCCGAGCGAGAGATGGGGTTAGGTGATGA
GGTCAATATGGGATTGAGCTGA back to topCoding sequence (CDS) from alignment at An13:157941..159812+ >CBS51388_008291-T1 ID=CBS51388_008291-T1|Name=CBS51388_008291-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3606bp|location=Sequence derived from alignment at An13:157941..159812+ (Aspergillus niger CBS 513.88) ATGGCCCCATCATCATCCACGCAGGACCATGCTGACTCTCAGCCTCCGAC GGTCGCTGCTTTCTCCCCCACCACCATCTCAGGCTCGTCCGTGACATCGA GACAGCGCTCCAGCATCATCGTGCATCGCAAATCGCCGCTACTGGTGGCC ACGCCCCCTCAGATCACCCGGGCATTGGCCTACTCGCATCCGTTTATTCT CCCCTTGAACAAGCTCGTTGGATTGCTCACATGGACGACCGGAGACGGTT GGCAGAGCTTCCTGCTGGTAGCGGGATTCTGGACGCTGGTTCTCTATGGC GACGTGATCGTTACTTGGACCGGGCCACTCCTCGTGGTCATTAGCCTTAT TCTGGGCATGTACTGGAGACGCTACTCCCCGCTGTCGTCGAGGGCTCACT TGAGTGAGAAGCAAGGCCATCAGAGGGCTGCTTCGGAGACATTTCCTCAT CGGCATGAAACGTTGGACGAAATAGTCGAGACGCTACGGACATTTACCAC ACGTTGCAATATTCTCCTGGAGCCACTCGTTGAATTTACCGACTTCTTAT CCACGCAGAGGACGGCGACTTCTGCCACTACCCGACCAGCTCTTACGACA TTATTCTTTCGAATCCTCTTCGTGACCCCAATCTGGATCGCCTTGACTCT TCCGCCGTTGTATCTGATCACCACTCGCCGAGTCATCATGACACTCGGCA CCATCATTCTCACCTATCACTCTCGCCCGGCAAGAGTATCTCGTGTCATT CTTTGGCGATCGTTAACAATCCGCCGGATATGCTCTATAATTACGGGGCT ATCCTTCTCTTCTACTGTTGATAAGGCGCAGTCGCTGTTAATGCAGAGCC AGGGCCATGCAATGAGCATTGCGACAAGACGTCGAGGAGACTCTTCCGGT GTAAGATTCACCTTTGTCATCTCTGAAAACCAACGTCGTTGGCTTGGGAT CGGCTGGACGTACTCTCTGTTCCCTTCCGAGCGAGCTGCTTGGACAGACG AGCATTTGAACCACGTCCCGTCGAAGGAGGAATTCGAGTTACCCGGTGTC GCAAACGGCAATGCTCAGTGGCGCTGGGTCGAAGGGAGTGACTGGCGTAT TGAAGGGGCCGACGAGTCAGGAAAGTCGGATGCCAAAGCCGATGGCGGAG GCTGGGTCTACTATGACAATAAGTGGAATGACGGTCGTCGTGGCCAGGAT GGTTGGGATCGATACACCCGTCGTCGGAAGTGGTGTCGTGACGCCGAACT AGTTGAGATTCCGTCAGCGGGCGAGAGCACCTCAGTGGAGACTAAATCGG GGATCGCTCAATCATTGGAGCAGGAAAAGGCAGCTAACGCCCATGAAAAA GAAATCTCATCGACGGTCGACGCCGACGCAGAAAGTCTCGCCCCATCGAC CTCATCCAAGTCCCGCAAACGACGTTGGTTTGGGAGTACGAAGAGTGTAA GCGACAAAGCCAGCAGCATCTCCTCTGCTCCACCAACGTCCACGAATAAC TCCTCCGTAGATCTCGGAAAATTAAAGTCCGCCACCCCTACCGGCAGCTA CACGCCAACTGGGAAGTCCACCGCAACTGCAACCCGACCCATCAGTATTC CGCACGCCCGGAAGATGTCCAATCACTCGGGAGGCAGCGCCAGTCACAGC AGCAGCTTCGGCCGTGAGGGAAGTATCAGGGAGAAAGAGATGTCTCTTGC TCAGGATCGTCTGGACCGCTGGGGCACTCGCGCCACGGGGGGTACTGAAC GAGCCGAGCGAGAGATGGGGTTAGGTGATGAGGTCAATATGGGATTGAGC TGAATGGCCCCATCATCATCCACGCAGGACCATGCTGACTCTCAGCCTCC GACGGTCGCTGCTTTCTCCCCCACCACCATCTCAGGCTCGTCCGTGACAT CGAGACAGCGCTCCAGCATCATCGTGCATCGCAAATCGCCGCTACTGGTG GCCACGCCCCCTCAGATCACCCGGGCATTGGCCTACTCGCATCCGTTTAT TCTCCCCTTGAACAAGCTCGTTGGATTGCTCACATGGACGACCGGAGACG GTTGGCAGAGCTTCCTGCTGGTAGCGGGATTCTGGACGCTGGTTCTCTAT GGCGACGTGATCGTTACTTGGACCGGGCCACTCCTCGTGGTCATTAGCCT TATTCTGGGCATGTACTGGAGACGCTACTCCCCGCTGTCGTCGAGGGCTC ACTTGAGTGAGAAGCAAGGCCATCAGAGGGCTGCTTCGGAGACATTTCCT CATCGGCATGAAACGTTGGACGAAATAGTCGAGACGCTACGGACATTTAC CACACGTTGCAATATTCTCCTGGAGCCACTCGTTGAATTTACCGACTTCT TATCCACGCAGAGGACGGCGACTTCTGCCACTACCCGACCAGCTCTTACG ACATTATTCTTTCGAATCCTCTTCGTGACCCCAATCTGGATCGCCTTGAC TCTTCCGCCGTTGTATCTGATCACCACTCGCCGAGTCATCATGACACTCG GCACCATCATTCTCACCTATCACTCTCGCCCGGCAAGAGTATCTCGTGTC ATTCTTTGGCGATCGTTAACAATCCGCCGGATATGCTCTATAATTACGGG GCTATCCTTCTCTTCTACTGTTGATAAGGCGCAGTCGCTGTTAATGCAGA GCCAGGGCCATGCAATGAGCATTGCGACAAGACGTCGAGGAGACTCTTCC GGTGTAAGATTCACCTTTGTCATCTCTGAAAACCAACGTCGTTGGCTTGG GATCGGCTGGACGTACTCTCTGTTCCCTTCCGAGCGAGCTGCTTGGACAG ACGAGCATTTGAACCACGTCCCGTCGAAGGAGGAATTCGAGTTACCCGGT GTCGCAAACGGCAATGCTCAGTGGCGCTGGGTCGAAGGGAGTGACTGGCG TATTGAAGGGGCCGACGAGTCAGGAAAGTCGGATGCCAAAGCCGATGGCG GAGGCTGGGTCTACTATGACAATAAGTGGAATGACGGTCGTCGTGGCCAG GATGGTTGGGATCGATACACCCGTCGTCGGAAGTGGTGTCGTGACGCCGA ACTAGTTGAGATTCCGTCAGCGGGCGAGAGCACCTCAGTGGAGACTAAAT CGGGGATCGCTCAATCATTGGAGCAGGAAAAGGCAGCTAACGCCCATGAA AAAGAAATCTCATCGACGGTCGACGCCGACGCAGAAAGTCTCGCCCCATC GACCTCATCCAAGTCCCGCAAACGACGTTGGTTTGGGAGTACGAAGAGTG TAAGCGACAAAGCCAGCAGCATCTCCTCTGCTCCACCAACGTCCACGAAT AACTCCTCCGTAGATCTCGGAAAATTAAAGTCCGCCACCCCTACCGGCAG CTACACGCCAACTGGGAAGTCCACCGCAACTGCAACCCGACCCATCAGTA TTCCGCACGCCCGGAAGATGTCCAATCACTCGGGAGGCAGCGCCAGTCAC AGCAGCAGCTTCGGCCGTGAGGGAAGTATCAGGGAGAAAGAGATGTCTCT TGCTCAGGATCGTCTGGACCGCTGGGGCACTCGCGCCACGGGGGGTACTG AACGAGCCGAGCGAGAGATGGGGTTAGGTGATGAGGTCAATATGGGATTG AGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR010482 |
DBxref | InterPro:IPR006614 |
DBxref | PFAM:PF06398 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
An13 | supercontig | An13:157941..159812 + |
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