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CBS51388_008336-T1, CBS51388_008336-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008336-T1
Unique NameCBS51388_008336-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An13:296942..297875-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008336-T1 ID=CBS51388_008336-T1|Name=CBS51388_008336-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=934bp|location=Sequence derived from alignment at An13:296942..297875- (Aspergillus niger CBS 513.88)
ATGGTCGGTCACGGTATGACGGGGATGCTCGGCGAGGGTTAGTGGTCTCG
TGCTGTGAGTTCATGATGTGTCGGAGCAGGAGCTAATTAGTTATTGCAGA
TGGCATTCATGTTGACATGAACCACTTGAAGAGCGGAGAAGTAAAGTATG
TCCTGACTTACTCAATGAGACTTGCATGAACGGTCACTAACTCATCTGTA
CAGCCTAGGAACGTCGATGTGAGTTTCAGTCAGCCTCCGATGCAACAACT
ATTCCATATGTTGACGAAATACAGCATGGCTATCAACTTCAAGGATGGTG
TTATATTGGGTGCCGACAGTCGGACGACAACCGGAGCTTACATCGCCAAT
CGAGTCACCGACAAGTTGACGCAGGTCCATGACACAATCTGGTGCTGTCG
ATCAGGGTCCGCCGCGGACACTCAGGCTGTGGCAGATATTGTGTCCTATC
ACCTCAACATGTACTCGATCACCAACAACGAGGCGCCGAGTACTCAGGTC
GCCGCATCGCTGTTCCAAGAGCTATGTTACGAGAACAAGGACATGCTAAG
GTAGGCACACAACCGGATCAGCCTGGACCGAGCAATCTTTGTTGACCAAT
CAATCACAGTGCCGGTATCATCATCGCCGGATACGACCCGAAGCACGGAG
GTCAGGTGTATTCGATACCGTTGGGCGGGTCTCTTCACAAGCAACCGTTC
TCTATCGGCGGATCTGGATCAACCTATATCTATGGCTACTGTGATGCTCA
CTGGAGGGAGAACATGACAGAGGAGGAAGGCATCAACTTCGTCCGCGGAG
CACTGCAAGAAGCAATCAAGTGGGATGGCAGTTCCGGTGGTGTAATCCGA
CTGGTGGTGCTGACGTCTCGGGGCGCCCAGCGACACCTCTACCTGCCAGA
CACGGGCTACACCGGCCCGGGCGTTACCAATTAA
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Coding sequence (CDS) from alignment at An13:296942..297875-

>CBS51388_008336-T1 ID=CBS51388_008336-T1|Name=CBS51388_008336-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3495bp|location=Sequence derived from alignment at An13:296942..297875- (Aspergillus niger CBS 513.88)
TGCCGGTATCATCATCGCCGGATACGACCCGAAGCACGGAGGTCAGGTGT
ATTCGATACCGTTGGGCGGGTCTCTTCACAAGCAACCGTTCTCTATCGGC
GGATCTGGATCAACCTATATCTATGGCTACTGTGATGCTCACTGGAGGGA
GAACATGACAGAGGAGGAAGGCATCAACTTCGTCCGCGGAGCACTGCAAG
AAGCAATCAAGTGGGATGGCAGTTCCGGTGGTGTAATCCGACTGGTGGTG
CTGACGTCTCGGGGCGCCCAGCGACACCTCTACCTGCCAGACACGGGCTA
CACCGGCCCGGGCGTTACCAATTAACATGGCTATCAACTTCAAGGATGGT
GTTATATTGGGTGCCGACAGTCGGACGACAACCGGAGCTTACATCGCCAA
TCGAGTCACCGACAAGTTGACGCAGGTCCATGACACAATCTGGTGCTGTC
GATCAGGGTCCGCCGCGGACACTCAGGCTGTGGCAGATATTGTGTCCTAT
CACCTCAACATGTACTCGATCACCAACAACGAGGCGCCGAGTACTCAGGT
CGCCGCATCGCTGTTCCAAGAGCTATGTTACGAGAACAAGGACATGCTAA
GCCTAGGAACGTCGATATGGCATTCATGTTGACATGAACCACTTGAAGAG
CGGAGAAGTAAAATGGTCGGTCACGGTATGACGGGGATGCTCGGCGAGGT
GCCGGTATCATCATCGCCGGATACGACCCGAAGCACGGAGGTCAGGTGTA
TTCGATACCGTTGGGCGGGTCTCTTCACAAGCAACCGTTCTCTATCGGCG
GATCTGGATCAACCTATATCTATGGCTACTGTGATGCTCACTGGAGGGAG
AACATGACAGAGGAGGAAGGCATCAACTTCGTCCGCGGAGCACTGCAAGA
AGCAATCAAGTGGGATGGCAGTTCCGGTGGTGTAATCCGACTGGTGGTGC
TGACGTCTCGGGGCGCCCAGCGACACCTCTACCTGCCAGACACGGGCTAC
ACCGGCCCGGGCGTTACCAATTAACATGGCTATCAACTTCAAGGATGGTG
TTATATTGGGTGCCGACAGTCGGACGACAACCGGAGCTTACATCGCCAAT
CGAGTCACCGACAAGTTGACGCAGGTCCATGACACAATCTGGTGCTGTCG
ATCAGGGTCCGCCGCGGACACTCAGGCTGTGGCAGATATTGTGTCCTATC
ACCTCAACATGTACTCGATCACCAACAACGAGGCGCCGAGTACTCAGGTC
GCCGCATCGCTGTTCCAAGAGCTATGTTACGAGAACAAGGACATGCTAAG
CCTAGGAACGTCGATATGGCATTCATGTTGACATGAACCACTTGAAGAGC
GGAGAAGTAAAATGGTCGGTCACGGTATGACGGGGATGCTCGGCGAGGTG
CCGGTATCATCATCGCCGGATACGACCCGAAGCACGGAGGTCAGGTGTAT
TCGATACCGTTGGGCGGGTCTCTTCACAAGCAACCGTTCTCTATCGGCGG
ATCTGGATCAACCTATATCTATGGCTACTGTGATGCTCACTGGAGGGAGA
ACATGACAGAGGAGGAAGGCATCAACTTCGTCCGCGGAGCACTGCAAGAA
GCAATCAAGTGGGATGGCAGTTCCGGTGGTGTAATCCGACTGGTGGTGCT
GACGTCTCGGGGCGCCCAGCGACACCTCTACCTGCCAGACACGGGCTACA
CCGGCCCGGGCGTTACCAATTAACATGGCTATCAACTTCAAGGATGGTGT
TATATTGGGTGCCGACAGTCGGACGACAACCGGAGCTTACATCGCCAATC
GAGTCACCGACAAGTTGACGCAGGTCCATGACACAATCTGGTGCTGTCGA
TCAGGGTCCGCCGCGGACACTCAGGCTGTGGCAGATATTGTGTCCTATCA
CCTCAACATGTACTCGATCACCAACAACGAGGCGCCGAGTACTCAGGTCG
CCGCATCGCTGTTCCAAGAGCTATGTTACGAGAACAAGGACATGCTAAGC
CTAGGAACGTCGATATGGCATTCATGTTGACATGAACCACTTGAAGAGCG
GAGAAGTAAAATGGTCGGTCACGGTATGACGGGGATGCTCGGCGAGGTGC
CGGTATCATCATCGCCGGATACGACCCGAAGCACGGAGGTCAGGTGTATT
CGATACCGTTGGGCGGGTCTCTTCACAAGCAACCGTTCTCTATCGGCGGA
TCTGGATCAACCTATATCTATGGCTACTGTGATGCTCACTGGAGGGAGAA
CATGACAGAGGAGGAAGGCATCAACTTCGTCCGCGGAGCACTGCAAGAAG
CAATCAAGTGGGATGGCAGTTCCGGTGGTGTAATCCGACTGGTGGTGCTG
ACGTCTCGGGGCGCCCAGCGACACCTCTACCTGCCAGACACGGGCTACAC
CGGCCCGGGCGTTACCAATTAACATGGCTATCAACTTCAAGGATGGTGTT
ATATTGGGTGCCGACAGTCGGACGACAACCGGAGCTTACATCGCCAATCG
AGTCACCGACAAGTTGACGCAGGTCCATGACACAATCTGGTGCTGTCGAT
CAGGGTCCGCCGCGGACACTCAGGCTGTGGCAGATATTGTGTCCTATCAC
CTCAACATGTACTCGATCACCAACAACGAGGCGCCGAGTACTCAGGTCGC
CGCATCGCTGTTCCAAGAGCTATGTTACGAGAACAAGGACATGCTAAGCC
TAGGAACGTCGATATGGCATTCATGTTGACATGAACCACTTGAAGAGCGG
AGAAGTAAAATGGTCGGTCACGGTATGACGGGGATGCTCGGCGAGGTGCC
GGTATCATCATCGCCGGATACGACCCGAAGCACGGAGGTCAGGTGTATTC
GATACCGTTGGGCGGGTCTCTTCACAAGCAACCGTTCTCTATCGGCGGAT
CTGGATCAACCTATATCTATGGCTACTGTGATGCTCACTGGAGGGAGAAC
ATGACAGAGGAGGAAGGCATCAACTTCGTCCGCGGAGCACTGCAAGAAGC
AATCAAGTGGGATGGCAGTTCCGGTGGTGTAATCCGACTGGTGGTGCTGA
CGTCTCGGGGCGCCCAGCGACACCTCTACCTGCCAGACACGGGCTACACC
GGCCCGGGCGTTACCAATTAACATGGCTATCAACTTCAAGGATGGTGTTA
TATTGGGTGCCGACAGTCGGACGACAACCGGAGCTTACATCGCCAATCGA
GTCACCGACAAGTTGACGCAGGTCCATGACACAATCTGGTGCTGTCGATC
AGGGTCCGCCGCGGACACTCAGGCTGTGGCAGATATTGTGTCCTATCACC
TCAACATGTACTCGATCACCAACAACGAGGCGCCGAGTACTCAGGTCGCC
GCATCGCTGTTCCAAGAGCTATGTTACGAGAACAAGGACATGCTAAGCCT
AGGAACGTCGATATGGCATTCATGTTGACATGAACCACTTGAAGAGCGGA
GAAGTAAAATGGTCGGTCACGGTATGACGGGGATGCTCGGCGAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
GO:0004175endopeptidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PRE3CBS51388_008336Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008336-T1CBS51388_008336-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008336-T1.cdsCBS51388_008336-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008336-T1.exon5CBS51388_008336-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_008336-T1.exon4CBS51388_008336-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_008336-T1.exon3CBS51388_008336-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_008336-T1.exon2CBS51388_008336-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008336-T1.exon1CBS51388_008336-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteMEROPS:MER0001645
DBxrefInterPro:IPR023333
DBxrefInterPro:IPR016050
DBxrefInterPro:IPR029055
DBxrefInterPro:IPR001353
DBxrefInterPro:IPR000243
DBxrefPFAM:PF00227
ProductProteasome subunit beta type-1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An13supercontigAn13:296942..297875 -
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