|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An13:311467..313402+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008341-T1 ID=CBS51388_008341-T1|Name=CBS51388_008341-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1936bp|location=Sequence derived from alignment at An13:311467..313402+ (Aspergillus niger CBS 513.88)
ATGCGCTTCACCAAGGAGGAAAAGACGACCACTGAGACCAACCAGGAGGT
CTCTTATTCCGCCGAGTCCCAAAGCAAGGAAGTCACCTCTGGCCATGACG
ATGGCATCTTTTCCAGTTCAGACCACTCGCAACTGAGTCTGGAAGCGCAA
AACGAAAAAGAAGTGGAAACTCACCCTGATGAGGTCACCAAGGATGCCCA
GCTAGGTGTGCAGAAAGCTGAAGCGGCGGCCCTAGTCTGGAGCAAGCAGG
CCGTATATGCTACTTATGCTTGGTATCTACCTACCTTTCCTTTTCATTCC
CATACACCGCTGTACAATCTATCTAACAGCCTAGGATCTGGGTGTGCTTC
TTCCTTCTGGCCCTCAACAACTCCATCAGCGGCACCGTCATCAACCGCGC
CTACGCCGACTTCAAAGCCGCCCCTCAAGTCAGCACAGCCAGCATTCTCT
ACAGCATCATCGGTGGCGTGTTGAAGCTGCCGATTGCGAAGACGTTGAAC
ATCTGGGGCCGTGCCGAGGGTCTAGTCGTGTGGGTGGTCATCTACACCAT
TGGATTGATTGTGCTGGCCGCGTGCGATGGACCGAATTCCTATGCCGCGG
GCTATGTCCTCTTCTATGTGGGCTACTCGGGTATCTATCTCGTGCTGGAC
GTTTATATTGCCGATACCTCGGGCTTGCAGAACCGGGCGTTTACGTTTGC
GTTTGCTAGCACCCCGTTCATCTGCACGGCGTTTACGGGGCCATTGGCGG
GTGAGTCGTTCCTCAAGGTGGCGACGTGGCGCTGGGCGTATGGGGTGTTT
GCTATCGTTATGCCGGTGGTGTTTTCACCGTTGGTGGTGCTGTTGAAGTA
TTATCAGCGCAAGGCGGAGAGTATGGGGTTGTTGAAGAAGGAGGAGAGTG
GAAGGACGACGATGCAGTCAATCGTTCACTATATTCATGAGTTTGATTGT
ACGTCGTGCCCTAATTCCCTTCCATTTGCTTTTATGCTAACGAACCAGTA
ATCGGTGCCTGCCTGCTCATGGCCGCATGGGTCCTGCTCCTTCTTCCCTT
CAGTCTGCAACAGTACGGACGCGCGCAATACAAGAGCGCCAAATTCATCG
CCATGGTCGTCATTGGCTTCGTCTTGCTGTTTGTCTTTGCCGCGTGGGAG
AAATGGTTCACGCGGAAGCACTTTGTGCGGTACGAGCTGCTGCGACAGCG
CACTGTGCTGGGAGCGTGCATCATGTCCGCGGTGTCCTATTTCAGCTTCT
ACTGCTGGGACCTGTACTTCTATGACTTTTGCATCGTGGTGTTCAATCTC
AGCGTGTCAATGACCGGCTACATGACGCAGATCTACAACGTGGGATCATG
TTTCTGGGGCGTGGTCTTTGGCATCTGGATCCGCTACACCAAACACTTCA
AGTACACTTGCTTGTGCTTCGGCCTGCCGCTGCTCTGCCTGGGGGCGGGA
CTGATGATCCACTTCCGCGGCGAAGCCAGCAACGACATCAACTACGTGAT
CATGTCGCAGATCTTCATTGCCTTTGGCGGCGGCACGATCGTCATTGGTG
ATGATATGGCGGTGATGGCTGCGGCGGATCGCGAAGGTGTGCCTATGATG
CTGTCGCTGTTGGGGCTATTTTCGAGTCTGGGCGGCGCTATTGGGTATGC
TGTTGCTGCGGCGGTGTATACCAATATCTTTCCGCAGGCGTTGGAGAATC
GTCTTCCTGCGGATTTGAAGGCGAATGCAACGGATATTTATCTGGGTGGG
TATACTGCACAGATGGAGTATCCAGTGGGATCACCGACCAGGAATGCGGT
GGATTATGCTTGGGGAAGAAGTCAGATGTATGGGTCTGTTGCTGGAACGG
CAATTTTGGTGCTGGGATTCCCGGCGATTGCGGTTTGGAAGAATTATCGG
GTTGATAGGAAGCAGAACAAGGGTACGATGATTTAG back to topCoding sequence (CDS) from alignment at An13:311467..313402+ >CBS51388_008341-T1 ID=CBS51388_008341-T1|Name=CBS51388_008341-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5472bp|location=Sequence derived from alignment at An13:311467..313402+ (Aspergillus niger CBS 513.88)
ATGCGCTTCACCAAGGAGGAAAAGACGACCACTGAGACCAACCAGGAGGT
CTCTTATTCCGCCGAGTCCCAAAGCAAGGAAGTCACCTCTGGCCATGACG
ATGGCATCTTTTCCAGTTCAGACCACTCGCAACTGAGTCTGGAAGCGCAA
AACGAAAAAGAAGTGGAAACTCACCCTGATGAGGTCACCAAGGATGCCCA
GCTAGGTGTGCAGAAAGCTGAAGCGGCGGCCCTAGTCTGGAGCAAGCAGG
CCGTATATGCTACTTATGCTTGGATCTGGGTGTGCTTCTTCCTTCTGGCC
CTCAACAACTCCATCAGCGGCACCGTCATCAACCGCGCCTACGCCGACTT
CAAAGCCGCCCCTCAAGTCAGCACAGCCAGCATTCTCTACAGCATCATCG
GTGGCGTGTTGAAGCTGCCGATTGCGAAGACGTTGAACATCTGGGGCCGT
GCCGAGGGTCTAGTCGTGTGGGTGGTCATCTACACCATTGGATTGATTGT
GCTGGCCGCGTGCGATGGACCGAATTCCTATGCCGCGGGCTATGTCCTCT
TCTATGTGGGCTACTCGGGTATCTATCTCGTGCTGGACGTTTATATTGCC
GATACCTCGGGCTTGCAGAACCGGGCGTTTACGTTTGCGTTTGCTAGCAC
CCCGTTCATCTGCACGGCGTTTACGGGGCCATTGGCGGGTGAGTCGTTCC
TCAAGGTGGCGACGTGGCGCTGGGCGTATGGGGTGTTTGCTATCGTTATG
CCGGTGGTGTTTTCACCGTTGGTGGTGCTGTTGAAGTATTATCAGCGCAA
GGCGGAGAGTATGGGGTTGTTGAAGAAGGAGGAGAGTGGAAGGACGACGA
TGCAGTCAATCGTTCACTATATTCATGAGTTTGATTTAATCGGTGCCTGC
CTGCTCATGGCCGCATGGGTCCTGCTCCTTCTTCCCTTCAGTCTGCAACA
GTACGGACGCGCGCAATACAAGAGCGCCAAATTCATCGCCATGGTCGTCA
TTGGCTTCGTCTTGCTGTTTGTCTTTGCCGCGTGGGAGAAATGGTTCACG
CGGAAGCACTTTGTGCGGTACGAGCTGCTGCGACAGCGCACTGTGCTGGG
AGCGTGCATCATGTCCGCGGTGTCCTATTTCAGCTTCTACTGCTGGGACC
TGTACTTCTATGACTTTTGCATCGTGGTGTTCAATCTCAGCGTGTCAATG
ACCGGCTACATGACGCAGATCTACAACGTGGGATCATGTTTCTGGGGCGT
GGTCTTTGGCATCTGGATCCGCTACACCAAACACTTCAAGTACACTTGCT
TGTGCTTCGGCCTGCCGCTGCTCTGCCTGGGGGCGGGACTGATGATCCAC
TTCCGCGGCGAAGCCAGCAACGACATCAACTACGTGATCATGTCGCAGAT
CTTCATTGCCTTTGGCGGCGGCACGATCGTCATTGGTGATGATATGGCGG
TGATGGCTGCGGCGGATCGCGAAGGTGTGCCTATGATGCTGTCGCTGTTG
GGGCTATTTTCGAGTCTGGGCGGCGCTATTGGGTATGCTGTTGCTGCGGC
GGTGTATACCAATATCTTTCCGCAGGCGTTGGAGAATCGTCTTCCTGCGG
ATTTGAAGGCGAATGCAACGGATATTTATCTGGGTGGGTATACTGCACAG
ATGGAGTATCCAGTGGGATCACCGACCAGGAATGCGGTGGATTATGCTTG
GGGAAGAAGTCAGATGTATGGGTCTGTTGCTGGAACGGCAATTTTGGTGC
TGGGATTCCCGGCGATTGCGGTTTGGAAGAATTATCGGGTTGATAGGAAG
CAGAACAAGGGTACGATGATTTAGATGCGCTTCACCAAGGAGGAAAAGAC
GACCACTGAGACCAACCAGGAGGTCTCTTATTCCGCCGAGTCCCAAAGCA
AGGAAGTCACCTCTGGCCATGACGATGGCATCTTTTCCAGTTCAGACCAC
TCGCAACTGAGTCTGGAAGCGCAAAACGAAAAAGAAGTGGAAACTCACCC
TGATGAGGTCACCAAGGATGCCCAGCTAGGTGTGCAGAAAGCTGAAGCGG
CGGCCCTAGTCTGGAGCAAGCAGGCCGTATATGCTACTTATGCTTGGATC
TGGGTGTGCTTCTTCCTTCTGGCCCTCAACAACTCCATCAGCGGCACCGT
CATCAACCGCGCCTACGCCGACTTCAAAGCCGCCCCTCAAGTCAGCACAG
CCAGCATTCTCTACAGCATCATCGGTGGCGTGTTGAAGCTGCCGATTGCG
AAGACGTTGAACATCTGGGGCCGTGCCGAGGGTCTAGTCGTGTGGGTGGT
CATCTACACCATTGGATTGATTGTGCTGGCCGCGTGCGATGGACCGAATT
CCTATGCCGCGGGCTATGTCCTCTTCTATGTGGGCTACTCGGGTATCTAT
CTCGTGCTGGACGTTTATATTGCCGATACCTCGGGCTTGCAGAACCGGGC
GTTTACGTTTGCGTTTGCTAGCACCCCGTTCATCTGCACGGCGTTTACGG
GGCCATTGGCGGGTGAGTCGTTCCTCAAGGTGGCGACGTGGCGCTGGGCG
TATGGGGTGTTTGCTATCGTTATGCCGGTGGTGTTTTCACCGTTGGTGGT
GCTGTTGAAGTATTATCAGCGCAAGGCGGAGAGTATGGGGTTGTTGAAGA
AGGAGGAGAGTGGAAGGACGACGATGCAGTCAATCGTTCACTATATTCAT
GAGTTTGATTTAATCGGTGCCTGCCTGCTCATGGCCGCATGGGTCCTGCT
CCTTCTTCCCTTCAGTCTGCAACAGTACGGACGCGCGCAATACAAGAGCG
CCAAATTCATCGCCATGGTCGTCATTGGCTTCGTCTTGCTGTTTGTCTTT
GCCGCGTGGGAGAAATGGTTCACGCGGAAGCACTTTGTGCGGTACGAGCT
GCTGCGACAGCGCACTGTGCTGGGAGCGTGCATCATGTCCGCGGTGTCCT
ATTTCAGCTTCTACTGCTGGGACCTGTACTTCTATGACTTTTGCATCGTG
GTGTTCAATCTCAGCGTGTCAATGACCGGCTACATGACGCAGATCTACAA
CGTGGGATCATGTTTCTGGGGCGTGGTCTTTGGCATCTGGATCCGCTACA
CCAAACACTTCAAGTACACTTGCTTGTGCTTCGGCCTGCCGCTGCTCTGC
CTGGGGGCGGGACTGATGATCCACTTCCGCGGCGAAGCCAGCAACGACAT
CAACTACGTGATCATGTCGCAGATCTTCATTGCCTTTGGCGGCGGCACGA
TCGTCATTGGTGATGATATGGCGGTGATGGCTGCGGCGGATCGCGAAGGT
GTGCCTATGATGCTGTCGCTGTTGGGGCTATTTTCGAGTCTGGGCGGCGC
TATTGGGTATGCTGTTGCTGCGGCGGTGTATACCAATATCTTTCCGCAGG
CGTTGGAGAATCGTCTTCCTGCGGATTTGAAGGCGAATGCAACGGATATT
TATCTGGGTGGGTATACTGCACAGATGGAGTATCCAGTGGGATCACCGAC
CAGGAATGCGGTGGATTATGCTTGGGGAAGAAGTCAGATGTATGGGTCTG
TTGCTGGAACGGCAATTTTGGTGCTGGGATTCCCGGCGATTGCGGTTTGG
AAGAATTATCGGGTTGATAGGAAGCAGAACAAGGGTACGATGATTTAGAT
GCGCTTCACCAAGGAGGAAAAGACGACCACTGAGACCAACCAGGAGGTCT
CTTATTCCGCCGAGTCCCAAAGCAAGGAAGTCACCTCTGGCCATGACGAT
GGCATCTTTTCCAGTTCAGACCACTCGCAACTGAGTCTGGAAGCGCAAAA
CGAAAAAGAAGTGGAAACTCACCCTGATGAGGTCACCAAGGATGCCCAGC
TAGGTGTGCAGAAAGCTGAAGCGGCGGCCCTAGTCTGGAGCAAGCAGGCC
GTATATGCTACTTATGCTTGGATCTGGGTGTGCTTCTTCCTTCTGGCCCT
CAACAACTCCATCAGCGGCACCGTCATCAACCGCGCCTACGCCGACTTCA
AAGCCGCCCCTCAAGTCAGCACAGCCAGCATTCTCTACAGCATCATCGGT
GGCGTGTTGAAGCTGCCGATTGCGAAGACGTTGAACATCTGGGGCCGTGC
CGAGGGTCTAGTCGTGTGGGTGGTCATCTACACCATTGGATTGATTGTGC
TGGCCGCGTGCGATGGACCGAATTCCTATGCCGCGGGCTATGTCCTCTTC
TATGTGGGCTACTCGGGTATCTATCTCGTGCTGGACGTTTATATTGCCGA
TACCTCGGGCTTGCAGAACCGGGCGTTTACGTTTGCGTTTGCTAGCACCC
CGTTCATCTGCACGGCGTTTACGGGGCCATTGGCGGGTGAGTCGTTCCTC
AAGGTGGCGACGTGGCGCTGGGCGTATGGGGTGTTTGCTATCGTTATGCC
GGTGGTGTTTTCACCGTTGGTGGTGCTGTTGAAGTATTATCAGCGCAAGG
CGGAGAGTATGGGGTTGTTGAAGAAGGAGGAGAGTGGAAGGACGACGATG
CAGTCAATCGTTCACTATATTCATGAGTTTGATTTAATCGGTGCCTGCCT
GCTCATGGCCGCATGGGTCCTGCTCCTTCTTCCCTTCAGTCTGCAACAGT
ACGGACGCGCGCAATACAAGAGCGCCAAATTCATCGCCATGGTCGTCATT
GGCTTCGTCTTGCTGTTTGTCTTTGCCGCGTGGGAGAAATGGTTCACGCG
GAAGCACTTTGTGCGGTACGAGCTGCTGCGACAGCGCACTGTGCTGGGAG
CGTGCATCATGTCCGCGGTGTCCTATTTCAGCTTCTACTGCTGGGACCTG
TACTTCTATGACTTTTGCATCGTGGTGTTCAATCTCAGCGTGTCAATGAC
CGGCTACATGACGCAGATCTACAACGTGGGATCATGTTTCTGGGGCGTGG
TCTTTGGCATCTGGATCCGCTACACCAAACACTTCAAGTACACTTGCTTG
TGCTTCGGCCTGCCGCTGCTCTGCCTGGGGGCGGGACTGATGATCCACTT
CCGCGGCGAAGCCAGCAACGACATCAACTACGTGATCATGTCGCAGATCT
TCATTGCCTTTGGCGGCGGCACGATCGTCATTGGTGATGATATGGCGGTG
ATGGCTGCGGCGGATCGCGAAGGTGTGCCTATGATGCTGTCGCTGTTGGG
GCTATTTTCGAGTCTGGGCGGCGCTATTGGGTATGCTGTTGCTGCGGCGG
TGTATACCAATATCTTTCCGCAGGCGTTGGAGAATCGTCTTCCTGCGGAT
TTGAAGGCGAATGCAACGGATATTTATCTGGGTGGGTATACTGCACAGAT
GGAGTATCCAGTGGGATCACCGACCAGGAATGCGGTGGATTATGCTTGGG
GAAGAAGTCAGATGTATGGGTCTGTTGCTGGAACGGCAATTTTGGTGCTG
GGATTCCCGGCGATTGCGGTTTGGAAGAATTATCGGGTTGATAGGAAGCA
GAACAAGGGTACGATGATTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | Siderochrome iron transporter 2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An13 | supercontig | An13:311467..313402 + |
|
