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Sequences
The following sequences are available for this feature:
mRNA from alignment at An13:516386..518857- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008410-T1 ID=CBS51388_008410-T1|Name=CBS51388_008410-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2472bp|location=Sequence derived from alignment at An13:516386..518857- (Aspergillus niger CBS 513.88)
ATGAAGCTCGTTACCCAGATAGCCATCGCATGGCAGTTAGCTGTCACTGC
AGCTGCAGTAACGCAGGTTAGTAGTTACCGTACCATTGGGACTCAAGCTG
ATCATTCAGTCGGAATTCGTCTCCCTCGATTCGTACTTCAACAACAAGGC
ATTTGGCGTATATCCCGGCCAGACGTCCTTTGATGCGTTGAATCAGTCCT
ATCCAGACCCCAGCATTATTGGCATCAATGGAACCTACACCTCCACGCAC
ACTGGTGTTGTCTACGACTTTCCGGGCTATCGTGGGCCCGACCTCCCTGA
CAATGTTGTCTGTGAAGGCCAGACAATCAATGTGCCTCGCGACCAGTACT
TCTCAGCATCCATGTTGGTAACATCCGACGTTCAGCTGTCCACCGTGTCG
GGGAATGTGACATACACGTATTCAGACGACTCGACACTTGTCTCCGAGCT
GCGCAGTCTACCTTGGTGGGCATTCCTGACAATCAATCGCGGCGAGATCA
TCTTCCCCTACCGGTACACTCACAACGACACCAACTTCAACACATCTCAC
ATCTTCGAATACTCTGCAGCACTGGATCCCAACAAGACTCTGCATTCGAT
CACCCTGCCAGTCACTACCAACACAACCACCGGCAGACTGCATATTTTTT
CCGTATCCCTGTGGAAATCCACCGCCCCATCAGCCCAAGTGCAATTCGTG
CGCCCGACCCAAAAGTGGACAGAAAGCGGCAACCAGATAGTCGAAGTGAC
CATCAACAACCCAGGCAGCAGCTGCATCGCAGGACCTGGAGTCAACTTAT
CATTATCCATGCCTGGAATCCGAACCCTAGAGCCCGCAAACGTCAAACGA
CTCTGTCCCGGCGACCAGAAACGCGTCAACATCGGCATCAACGGCACGGC
GAACGGAACAGCAACCGTTATCCTCAACTACACCCACTCCATCCAGCACC
AAACCTACCCTCACCCCCTCTCCCTCGGCCTAACAGAATGGACCTCAGAC
CTGTCTAGCCTCTCACAACATGAAAGCCCTGAATGGTTCGACGACGCCAA
ATTCGGCATCATGATCCACTGGGGTCCCTACTCCGTCCCCGGCTGGGGCA
ACTCGACTCCCTACGAAAGCTACGCCGAGTGGTTCTGGTACTCCACCCCC
CTTCCCCATATCCCAACCTCTTCCCCCAAACCCATCTAACATAGAAAACC
GTCAGGTGGTACACCACGCACCGTGCCGCCGACAAATCCGACACCTACGA
CTACCGGCTGCGCACCTTCGGGCCCACCTGGAACTACGACGACTCGTTCC
CCTCCTTCACAGCAGCTAACTTCTCCCCGAAAGCCTGGGTCGACCTCATC
TCAGCCTCGGGGGCCAAATACTTCGTGCTAACAACCAAACACCACGACGG
GTTCGCCCTCTTCGACACGCAAAACACCACCAACCGCTCCTCCCTCCACT
ACGGCCCGCACCGGGACCTCGTGTCAGAACTCTTCACCGCGTCCTCAATC
CACCACCCCACCCTAAAACGCGGCACCTACTTCTCCCTCCCAGAATGGTT
CAATCCAGACTTCGGGCCCTACGGGTTCGCCGAACTCCCGGGGAACACCT
CCACCAGCTGGCCAGGCATCATCGCCCGCAACCCCTACACTGGCCTGAAT
GAACCCTACACAGGCCGCATCCCCGTCACGGATTTCATCACAGACGTAAT
GGTTCCCCAAATGACCATTCTAGCTCACAATTACAGCACAGACATCATGT
GGTGTGACTGCGGGGCCGCGAACGGGACTGCGTCTTTCGCTAGCGAATGG
TTCAATTCCGCGCGTGCAGATAATCGCCAAGTGGCAATTAATTCGCGGTG
CGGGGTCGCGGAAGTGTCCGACTTCGATACGCCCGAGTATGCGACGTTTA
GCTCGGCGCAGTTGCGCAAGTGGGAGAGTAATATGGGCATGGATCCGTAT
AGTTATGGGTTTAATCGGGCGACTGCGGAAAGAAGTTATATGAATGCTAG
TACGGTGGTCAGGGATCTGGTGGATATGGTGAGTAAGAATGGGAATTTTT
TGTTGGATGTTGGGCCGCGCGCGGATGGGAGTATTGTCGAGAGGGAGGAG
AGGGAGTTGAGGAGGGCTGGGGAGTGGATTCGAGGACATGGGGAGGCGGT
GTTTGGGACGAGGGTTTGGTGGGTGAGGAGTGAGGCGGTTGGTGTGACAG
GTGATGGTGGGGATGTCGGGGTGAGGTTTACGCAGACGAATGAGGCGTTT
TATTTGTTGTTTCTGGGGGATCCGGGGAAGAAGGTGTTTGTGGATGCGTC
GGTGCCGTTGTTGAGGGGGGATAGAGTTGTTGTGGTGGGTGGCGATGGGG
AAAGGGAGGTAGAGGTTGAGTGGGAGGGGAGTGCGACGGAGGGATTTACG
TTTAGGGTTCCTGAGGGGGTATGGGATGGAGAGGAGTTTTGCTGGGTGTT
GAAGATTGTGTATCTTGCTTAG back to topCoding sequence (CDS) from alignment at An13:516386..518857- >CBS51388_008410-T1 ID=CBS51388_008410-T1|Name=CBS51388_008410-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7083bp|location=Sequence derived from alignment at An13:516386..518857- (Aspergillus niger CBS 513.88)
GTGGTACACCACGCACCGTGCCGCCGACAAATCCGACACCTACGACTACC
GGCTGCGCACCTTCGGGCCCACCTGGAACTACGACGACTCGTTCCCCTCC
TTCACAGCAGCTAACTTCTCCCCGAAAGCCTGGGTCGACCTCATCTCAGC
CTCGGGGGCCAAATACTTCGTGCTAACAACCAAACACCACGACGGGTTCG
CCCTCTTCGACACGCAAAACACCACCAACCGCTCCTCCCTCCACTACGGC
CCGCACCGGGACCTCGTGTCAGAACTCTTCACCGCGTCCTCAATCCACCA
CCCCACCCTAAAACGCGGCACCTACTTCTCCCTCCCAGAATGGTTCAATC
CAGACTTCGGGCCCTACGGGTTCGCCGAACTCCCGGGGAACACCTCCACC
AGCTGGCCAGGCATCATCGCCCGCAACCCCTACACTGGCCTGAATGAACC
CTACACAGGCCGCATCCCCGTCACGGATTTCATCACAGACGTAATGGTTC
CCCAAATGACCATTCTAGCTCACAATTACAGCACAGACATCATGTGGTGT
GACTGCGGGGCCGCGAACGGGACTGCGTCTTTCGCTAGCGAATGGTTCAA
TTCCGCGCGTGCAGATAATCGCCAAGTGGCAATTAATTCGCGGTGCGGGG
TCGCGGAAGTGTCCGACTTCGATACGCCCGAGTATGCGACGTTTAGCTCG
GCGCAGTTGCGCAAGTGGGAGAGTAATATGGGCATGGATCCGTATAGTTA
TGGGTTTAATCGGGCGACTGCGGAAAGAAGTTATATGAATGCTAGTACGG
TGGTCAGGGATCTGGTGGATATGGTGAGTAAGAATGGGAATTTTTTGTTG
GATGTTGGGCCGCGCGCGGATGGGAGTATTGTCGAGAGGGAGGAGAGGGA
GTTGAGGAGGGCTGGGGAGTGGATTCGAGGACATGGGGAGGCGGTGTTTG
GGACGAGGGTTTGGTGGGTGAGGAGTGAGGCGGTTGGTGTGACAGGTGAT
GGTGGGGATGTCGGGGTGAGGTTTACGCAGACGAATGAGGCGTTTTATTT
GTTGTTTCTGGGGGATCCGGGGAAGAAGGTGTTTGTGGATGCGTCGGTGC
CGTTGTTGAGGGGGGATAGAGTTGTTGTGGTGGGTGGCGATGGGGAAAGG
GAGGTAGAGGTTGAGTGGGAGGGGAGTGCGACGGAGGGATTTACGTTTAG
GGTTCCTGAGGGGGTATGGGATGGAGAGGAGTTTTGCTGGGTGTTGAAGA
TTGTGTATCTTGCTTAGTCGGAATTCGTCTCCCTCGATTCGTACTTCAAC
AACAAGGCATTTGGCGTATATCCCGGCCAGACGTCCTTTGATGCGTTGAA
TCAGTCCTATCCAGACCCCAGCATTATTGGCATCAATGGAACCTACACCT
CCACGCACACTGGTGTTGTCTACGACTTTCCGGGCTATCGTGGGCCCGAC
CTCCCTGACAATGTTGTCTGTGAAGGCCAGACAATCAATGTGCCTCGCGA
CCAGTACTTCTCAGCATCCATGTTGGTAACATCCGACGTTCAGCTGTCCA
CCGTGTCGGGGAATGTGACATACACGTATTCAGACGACTCGACACTTGTC
TCCGAGCTGCGCAGTCTACCTTGGTGGGCATTCCTGACAATCAATCGCGG
CGAGATCATCTTCCCCTACCGGTACACTCACAACGACACCAACTTCAACA
CATCTCACATCTTCGAATACTCTGCAGCACTGGATCCCAACAAGACTCTG
CATTCGATCACCCTGCCAGTCACTACCAACACAACCACCGGCAGACTGCA
TATTTTTTCCGTATCCCTGTGGAAATCCACCGCCCCATCAGCCCAAGTGC
AATTCGTGCGCCCGACCCAAAAGTGGACAGAAAGCGGCAACCAGATAGTC
GAAGTGACCATCAACAACCCAGGCAGCAGCTGCATCGCAGGACCTGGAGT
CAACTTATCATTATCCATGCCTGGAATCCGAACCCTAGAGCCCGCAAACG
TCAAACGACTCTGTCCCGGCGACCAGAAACGCGTCAACATCGGCATCAAC
GGCACGGCGAACGGAACAGCAACCGTTATCCTCAACTACACCCACTCCAT
CCAGCACCAAACCTACCCTCACCCCCTCTCCCTCGGCCTAACAGAATGGA
CCTCAGACCTGTCTAGCCTCTCACAACATGAAAGCCCTGAATGGTTCGAC
GACGCCAAATTCGGCATCATGATCCACTGGGGTCCCTACTCCGTCCCCGG
CTGGGGCAACTCGACTCCCTACGAAAGCTACGCCGAGTGGTTCTGATGAA
GCTCGTTACCCAGATAGCCATCGCATGGCAGTTAGCTGTCACTGCAGCTG
CAGTAACGCAGGTGGTACACCACGCACCGTGCCGCCGACAAATCCGACAC
CTACGACTACCGGCTGCGCACCTTCGGGCCCACCTGGAACTACGACGACT
CGTTCCCCTCCTTCACAGCAGCTAACTTCTCCCCGAAAGCCTGGGTCGAC
CTCATCTCAGCCTCGGGGGCCAAATACTTCGTGCTAACAACCAAACACCA
CGACGGGTTCGCCCTCTTCGACACGCAAAACACCACCAACCGCTCCTCCC
TCCACTACGGCCCGCACCGGGACCTCGTGTCAGAACTCTTCACCGCGTCC
TCAATCCACCACCCCACCCTAAAACGCGGCACCTACTTCTCCCTCCCAGA
ATGGTTCAATCCAGACTTCGGGCCCTACGGGTTCGCCGAACTCCCGGGGA
ACACCTCCACCAGCTGGCCAGGCATCATCGCCCGCAACCCCTACACTGGC
CTGAATGAACCCTACACAGGCCGCATCCCCGTCACGGATTTCATCACAGA
CGTAATGGTTCCCCAAATGACCATTCTAGCTCACAATTACAGCACAGACA
TCATGTGGTGTGACTGCGGGGCCGCGAACGGGACTGCGTCTTTCGCTAGC
GAATGGTTCAATTCCGCGCGTGCAGATAATCGCCAAGTGGCAATTAATTC
GCGGTGCGGGGTCGCGGAAGTGTCCGACTTCGATACGCCCGAGTATGCGA
CGTTTAGCTCGGCGCAGTTGCGCAAGTGGGAGAGTAATATGGGCATGGAT
CCGTATAGTTATGGGTTTAATCGGGCGACTGCGGAAAGAAGTTATATGAA
TGCTAGTACGGTGGTCAGGGATCTGGTGGATATGGTGAGTAAGAATGGGA
ATTTTTTGTTGGATGTTGGGCCGCGCGCGGATGGGAGTATTGTCGAGAGG
GAGGAGAGGGAGTTGAGGAGGGCTGGGGAGTGGATTCGAGGACATGGGGA
GGCGGTGTTTGGGACGAGGGTTTGGTGGGTGAGGAGTGAGGCGGTTGGTG
TGACAGGTGATGGTGGGGATGTCGGGGTGAGGTTTACGCAGACGAATGAG
GCGTTTTATTTGTTGTTTCTGGGGGATCCGGGGAAGAAGGTGTTTGTGGA
TGCGTCGGTGCCGTTGTTGAGGGGGGATAGAGTTGTTGTGGTGGGTGGCG
ATGGGGAAAGGGAGGTAGAGGTTGAGTGGGAGGGGAGTGCGACGGAGGGA
TTTACGTTTAGGGTTCCTGAGGGGGTATGGGATGGAGAGGAGTTTTGCTG
GGTGTTGAAGATTGTGTATCTTGCTTAGTCGGAATTCGTCTCCCTCGATT
CGTACTTCAACAACAAGGCATTTGGCGTATATCCCGGCCAGACGTCCTTT
GATGCGTTGAATCAGTCCTATCCAGACCCCAGCATTATTGGCATCAATGG
AACCTACACCTCCACGCACACTGGTGTTGTCTACGACTTTCCGGGCTATC
GTGGGCCCGACCTCCCTGACAATGTTGTCTGTGAAGGCCAGACAATCAAT
GTGCCTCGCGACCAGTACTTCTCAGCATCCATGTTGGTAACATCCGACGT
TCAGCTGTCCACCGTGTCGGGGAATGTGACATACACGTATTCAGACGACT
CGACACTTGTCTCCGAGCTGCGCAGTCTACCTTGGTGGGCATTCCTGACA
ATCAATCGCGGCGAGATCATCTTCCCCTACCGGTACACTCACAACGACAC
CAACTTCAACACATCTCACATCTTCGAATACTCTGCAGCACTGGATCCCA
ACAAGACTCTGCATTCGATCACCCTGCCAGTCACTACCAACACAACCACC
GGCAGACTGCATATTTTTTCCGTATCCCTGTGGAAATCCACCGCCCCATC
AGCCCAAGTGCAATTCGTGCGCCCGACCCAAAAGTGGACAGAAAGCGGCA
ACCAGATAGTCGAAGTGACCATCAACAACCCAGGCAGCAGCTGCATCGCA
GGACCTGGAGTCAACTTATCATTATCCATGCCTGGAATCCGAACCCTAGA
GCCCGCAAACGTCAAACGACTCTGTCCCGGCGACCAGAAACGCGTCAACA
TCGGCATCAACGGCACGGCGAACGGAACAGCAACCGTTATCCTCAACTAC
ACCCACTCCATCCAGCACCAAACCTACCCTCACCCCCTCTCCCTCGGCCT
AACAGAATGGACCTCAGACCTGTCTAGCCTCTCACAACATGAAAGCCCTG
AATGGTTCGACGACGCCAAATTCGGCATCATGATCCACTGGGGTCCCTAC
TCCGTCCCCGGCTGGGGCAACTCGACTCCCTACGAAAGCTACGCCGAGTG
GTTCTGATGAAGCTCGTTACCCAGATAGCCATCGCATGGCAGTTAGCTGT
CACTGCAGCTGCAGTAACGCAGGTGGTACACCACGCACCGTGCCGCCGAC
AAATCCGACACCTACGACTACCGGCTGCGCACCTTCGGGCCCACCTGGAA
CTACGACGACTCGTTCCCCTCCTTCACAGCAGCTAACTTCTCCCCGAAAG
CCTGGGTCGACCTCATCTCAGCCTCGGGGGCCAAATACTTCGTGCTAACA
ACCAAACACCACGACGGGTTCGCCCTCTTCGACACGCAAAACACCACCAA
CCGCTCCTCCCTCCACTACGGCCCGCACCGGGACCTCGTGTCAGAACTCT
TCACCGCGTCCTCAATCCACCACCCCACCCTAAAACGCGGCACCTACTTC
TCCCTCCCAGAATGGTTCAATCCAGACTTCGGGCCCTACGGGTTCGCCGA
ACTCCCGGGGAACACCTCCACCAGCTGGCCAGGCATCATCGCCCGCAACC
CCTACACTGGCCTGAATGAACCCTACACAGGCCGCATCCCCGTCACGGAT
TTCATCACAGACGTAATGGTTCCCCAAATGACCATTCTAGCTCACAATTA
CAGCACAGACATCATGTGGTGTGACTGCGGGGCCGCGAACGGGACTGCGT
CTTTCGCTAGCGAATGGTTCAATTCCGCGCGTGCAGATAATCGCCAAGTG
GCAATTAATTCGCGGTGCGGGGTCGCGGAAGTGTCCGACTTCGATACGCC
CGAGTATGCGACGTTTAGCTCGGCGCAGTTGCGCAAGTGGGAGAGTAATA
TGGGCATGGATCCGTATAGTTATGGGTTTAATCGGGCGACTGCGGAAAGA
AGTTATATGAATGCTAGTACGGTGGTCAGGGATCTGGTGGATATGGTGAG
TAAGAATGGGAATTTTTTGTTGGATGTTGGGCCGCGCGCGGATGGGAGTA
TTGTCGAGAGGGAGGAGAGGGAGTTGAGGAGGGCTGGGGAGTGGATTCGA
GGACATGGGGAGGCGGTGTTTGGGACGAGGGTTTGGTGGGTGAGGAGTGA
GGCGGTTGGTGTGACAGGTGATGGTGGGGATGTCGGGGTGAGGTTTACGC
AGACGAATGAGGCGTTTTATTTGTTGTTTCTGGGGGATCCGGGGAAGAAG
GTGTTTGTGGATGCGTCGGTGCCGTTGTTGAGGGGGGATAGAGTTGTTGT
GGTGGGTGGCGATGGGGAAAGGGAGGTAGAGGTTGAGTGGGAGGGGAGTG
CGACGGAGGGATTTACGTTTAGGGTTCCTGAGGGGGTATGGGATGGAGAG
GAGTTTTGCTGGGTGTTGAAGATTGTGTATCTTGCTTAGTCGGAATTCGT
CTCCCTCGATTCGTACTTCAACAACAAGGCATTTGGCGTATATCCCGGCC
AGACGTCCTTTGATGCGTTGAATCAGTCCTATCCAGACCCCAGCATTATT
GGCATCAATGGAACCTACACCTCCACGCACACTGGTGTTGTCTACGACTT
TCCGGGCTATCGTGGGCCCGACCTCCCTGACAATGTTGTCTGTGAAGGCC
AGACAATCAATGTGCCTCGCGACCAGTACTTCTCAGCATCCATGTTGGTA
ACATCCGACGTTCAGCTGTCCACCGTGTCGGGGAATGTGACATACACGTA
TTCAGACGACTCGACACTTGTCTCCGAGCTGCGCAGTCTACCTTGGTGGG
CATTCCTGACAATCAATCGCGGCGAGATCATCTTCCCCTACCGGTACACT
CACAACGACACCAACTTCAACACATCTCACATCTTCGAATACTCTGCAGC
ACTGGATCCCAACAAGACTCTGCATTCGATCACCCTGCCAGTCACTACCA
ACACAACCACCGGCAGACTGCATATTTTTTCCGTATCCCTGTGGAAATCC
ACCGCCCCATCAGCCCAAGTGCAATTCGTGCGCCCGACCCAAAAGTGGAC
AGAAAGCGGCAACCAGATAGTCGAAGTGACCATCAACAACCCAGGCAGCA
GCTGCATCGCAGGACCTGGAGTCAACTTATCATTATCCATGCCTGGAATC
CGAACCCTAGAGCCCGCAAACGTCAAACGACTCTGTCCCGGCGACCAGAA
ACGCGTCAACATCGGCATCAACGGCACGGCGAACGGAACAGCAACCGTTA
TCCTCAACTACACCCACTCCATCCAGCACCAAACCTACCCTCACCCCCTC
TCCCTCGGCCTAACAGAATGGACCTCAGACCTGTCTAGCCTCTCACAACA
TGAAAGCCCTGAATGGTTCGACGACGCCAAATTCGGCATCATGATCCACT
GGGGTCCCTACTCCGTCCCCGGCTGGGGCAACTCGACTCCCTACGAAAGC
TACGCCGAGTGGTTCTGATGAAGCTCGTTACCCAGATAGCCATCGCATGG
CAGTTAGCTGTCACTGCAGCTGCAGTAACGCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
| GO:0006004 | fucose metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004560 | alpha-L-fucosidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Note | CAZy:GH29 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR000933 |
| DBxref | InterPro:IPR016286 |
| DBxref | PFAM:PF01120 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An13 | supercontig | An13:516386..518857 - |
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