|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An13:540239..542108- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008419-T1 ID=CBS51388_008419-T1|Name=CBS51388_008419-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1870bp|location=Sequence derived from alignment at An13:540239..542108- (Aspergillus niger CBS 513.88)
ATGGATGACACCACAAAGAAAGATGTGGTATACGTGGAAGACATGGAGGA
GGGAGGATTGACGAGGGTTAAGGGGAAGGTGATGGGCACCGTGAAGATCA
CGGAGGGGACGGTGGTGTATATTCCTACTCCCACCGCTGACCCACAGGGT
GAGCAACTCTTCTATCGGGGAGCAATGTCAGGAATAACGATGAACAGACC
CCTTGAATATGTCGGTTTGGCAAAAGTCCATCATTCTAATTGTCATTTCT
ATCTGTACGTTGTTGACTATCCCAGAAGTTTCTTTAACACTCCCTGATCG
TGTGCAGTTTCATGTCTGGGTCTCGCTTTGGTCAGTGGATTCGGAGGACT
ATTACAATTCTACATTCCAGGATATACTGCCGCGGGGAAGGACTATGATA
TATTACCCATTTGATGACATATCCGACGTTGTTCATGTATGTGAGATCGG
TACCACATACGAGACGGAGCTGATTTTGGGCCAGGGGCATCGGGAACCTC
ATTGGTATGCCAATAGCAATCGGCATAGGAAGGAGAATCGTCCTCCTGAC
CTCAACCGTCGTGCTCGTCCTCGGATCGGTGCTATGCGCAACTGCGAAGA
CCTACGAATGGCACCTTGGTGCCCGGATGGTGCTTGGCTTAGCAGCCGGA
CAGAGTGAGGCATTGATTCCTATGATTACCCAGGTACGTGGCCTGCGACA
TCACTCTGAACCATACTTTTAGCTTACTCCCACCAGGAGATTTTCTTCCT
CCATGAACGCAGCAAAGCCCTTATGGCACAACTAGCCATCCAGGTCACTC
TAACCTCCGTATGGACACTATTCGCCGGCCCAATCGCTGAGTCGATCACA
CCAGAGGGATGGTACGGGCTTGGAGCCGGTCTTGCTGGAGCACTGCTTCT
AGTTGCTCTTGTCCTCCTACCCGAAACAAAATATGACCGTCCTCTCACAT
CCTACCAGGAAACGGACTCCGACCCAACGAGCACATCTTCTGACCTGAAA
AAGGACCTAGGAGCCGAGGTATGCACCATTCGCCCCGCCCTAGACTACGA
GAGATACGCACCTCGTACATGGAAATCCGACATGCGACTCTGGGTCGGGA
AGCCCCAGTGGACAGAGACCTGGGACGTGCTAAGAGTAAGTCCATATCTG
TGCAGACAGAACCATCTTTACATCATTTCTAACCCCAGCCAGCAAACCTT
CGAGCTCCTCTTCTTCCCGAACGTCCTTTGGGCCCTGCTTCTCAACGGCC
TCACAATCGGTGTAAACGTCGCCATTGGCACCACCTACAGCACCATCCTC
GCCGATCCACCCTACAACTGGCCCGACAGCAGCGCAAGCTACATCAACTG
CGGCCAGATAATCGTCGCTATCGTCGCCCTCCCCCTTCTCGGCCACGGCT
CCGACTACTTAGTGAAATACTTCGCCAATCGCAACAACGGCATCCACGAG
CCGGAAATCCGCATCATCCCTCTCATTTTCCCTATCATTGTTGGCACCTT
CACTGCCGCGCTATATGGCCAAGGCGGCGCCCACCCGTACGAGTACCACT
GGTTCATATATGCCTGGACGGTAGCAGCATACTACTTCTGTTTTGTTGGA
GCAAATATCGTTGGCATTACGTACCTGCTTGATAGTTATCCTGGGAGATC
GGGACCTTTGTTGGTTATTATCTGTGCGTTTCGGGGTTTTATTTCCTTTG
GGACGAGTTATGCCGTGTCGCCGTTCATTGCGCTTCATGGGTATGATGGG
GCTTTTGGGACTTATGCGGCCTTGACGGCGGCTTTTGGGCTGTTGGGGAT
TCCGGTGTTTATTTGGGGGAAGCAGATTCGGAGGTTTACGGGGAGGTTTG
CGAAGAATAAGACGGATTGA back to topCoding sequence (CDS) from alignment at An13:540239..542108- >CBS51388_008419-T1 ID=CBS51388_008419-T1|Name=CBS51388_008419-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6420bp|location=Sequence derived from alignment at An13:540239..542108- (Aspergillus niger CBS 513.88)
GAGATTTTCTTCCTCCATGAACGCAGCAAAGCCCTTATGGCACAACTAGC
CATCCAGGTCACTCTAACCTCCGTATGGACACTATTCGCCGGCCCAATCG
CTGAGTCGATCACACCAGAGGGATGGTACGGGCTTGGAGCCGGTCTTGCT
GGAGCACTGCTTCTAGTTGCTCTTGTCCTCCTACCCGAAACAAAATATGA
CCGTCCTCTCACATCCTACCAGGAAACGGACTCCGACCCAACGAGCACAT
CTTCTGACCTGAAAAAGGACCTAGGAGCCGAGGTATGCACCATTCGCCCC
GCCCTAGACTACGAGAGATACGCACCTCGTACATGGAAATCCGACATGCG
ACTCTGGGTCGGGAAGCCCCAGTGGACAGAGACCTGGGACGTGCTAAGAG
TAAGTCCATATCTGTGCAGACAGAACCATCTTTACATCATTTCTAACCCC
AGCCAGCAAACCTTCGAGCTCCTCTTCTTCCCGAACGTCCTTTGGGCCCT
GCTTCTCAACGGCCTCACAATCGGTGTAAACGTCGCCATTGGCACCACCT
ACAGCACCATCCTCGCCGATCCACCCTACAACTGGCCCGACAGCAGCGCA
AGCTACATCAACTGCGGCCAGATAATCGTCGCTATCGTCGCCCTCCCCCT
TCTCGGCCACGGCTCCGACTACTTAGTGAAATACTTCGCCAATCGCAACA
ACGGCATCCACGAGCCGGAAATCCGCATCATCCCTCTCATTTTCCCTATC
ATTGTTGGCACCTTCACTGCCGCGCTATATGGCCAAGGCGGCGCCCACCC
GTACGAGTACCACTGGTTCATATATGCCTGGACGGTAGCAGCATACTACT
TCTGTTTTGTTGGAGCAAATATCGTTGGCATTACGTACCTGCTTGATAGT
TATCCTGGGAGATCGGGACCTTTGTTGGTTATTATCTGTGCGTTTCGGGG
TTTTATTTCCTTTGGGACGAGTTATGCCGTGTCGCCGTTCATTGCGCTTC
ATGGGTATGATGGGGCTTTTGGGACTTATGCGGCCTTGACGGCGGCTTTT
GGGCTGTTGGGGATTCCGGTGTTTATTTGGGGGAAGCAGATTCGGAGGTT
TACGGGGAGGTTTGCGAAGAATAAGACGGATTGAACCTACGAATGGCACC
TTGGTGCCCGGATGGTGCTTGGCTTAGCAGCCGGACAGAGTGAGGCATTG
ATTCCTATGATTACCCAGACCCCTTGAATATGTCGGTTTGGCAAAAGTCC
ATCATTCTAATTGTCATTTCTATCTGTACGTTGTTGACTATCCCAGAAGT
TTCTTTAACACTCCCTGATCGTGTGCAGTTTCATGTCTGGGTCTCGCTTT
GGTCAGTGGATTCGGAGGACTATTACAATTCTACATTCCAGGATATACTG
CCGCGGGGAAGGACTATGATATATTACCCATTTGATGACATATCCGACGT
TGTTCATATGGATGACACCACAAAGAAAGATGTGGTATACGTGGAAGACA
TGGAGGAGGGAGGATTGACGAGGGTTAAGGGGAAGGTGATGGGCACCGTG
AAGATCACGGAGGGGACGGTGGTGTATATTCCTACTCCCACCGCTGACCC
ACAGGGAGATTTTCTTCCTCCATGAACGCAGCAAAGCCCTTATGGCACAA
CTAGCCATCCAGGTCACTCTAACCTCCGTATGGACACTATTCGCCGGCCC
AATCGCTGAGTCGATCACACCAGAGGGATGGTACGGGCTTGGAGCCGGTC
TTGCTGGAGCACTGCTTCTAGTTGCTCTTGTCCTCCTACCCGAAACAAAA
TATGACCGTCCTCTCACATCCTACCAGGAAACGGACTCCGACCCAACGAG
CACATCTTCTGACCTGAAAAAGGACCTAGGAGCCGAGGTATGCACCATTC
GCCCCGCCCTAGACTACGAGAGATACGCACCTCGTACATGGAAATCCGAC
ATGCGACTCTGGGTCGGGAAGCCCCAGTGGACAGAGACCTGGGACGTGCT
AAGAGTAAGTCCATATCTGTGCAGACAGAACCATCTTTACATCATTTCTA
ACCCCAGCCAGCAAACCTTCGAGCTCCTCTTCTTCCCGAACGTCCTTTGG
GCCCTGCTTCTCAACGGCCTCACAATCGGTGTAAACGTCGCCATTGGCAC
CACCTACAGCACCATCCTCGCCGATCCACCCTACAACTGGCCCGACAGCA
GCGCAAGCTACATCAACTGCGGCCAGATAATCGTCGCTATCGTCGCCCTC
CCCCTTCTCGGCCACGGCTCCGACTACTTAGTGAAATACTTCGCCAATCG
CAACAACGGCATCCACGAGCCGGAAATCCGCATCATCCCTCTCATTTTCC
CTATCATTGTTGGCACCTTCACTGCCGCGCTATATGGCCAAGGCGGCGCC
CACCCGTACGAGTACCACTGGTTCATATATGCCTGGACGGTAGCAGCATA
CTACTTCTGTTTTGTTGGAGCAAATATCGTTGGCATTACGTACCTGCTTG
ATAGTTATCCTGGGAGATCGGGACCTTTGTTGGTTATTATCTGTGCGTTT
CGGGGTTTTATTTCCTTTGGGACGAGTTATGCCGTGTCGCCGTTCATTGC
GCTTCATGGGTATGATGGGGCTTTTGGGACTTATGCGGCCTTGACGGCGG
CTTTTGGGCTGTTGGGGATTCCGGTGTTTATTTGGGGGAAGCAGATTCGG
AGGTTTACGGGGAGGTTTGCGAAGAATAAGACGGATTGAACCTACGAATG
GCACCTTGGTGCCCGGATGGTGCTTGGCTTAGCAGCCGGACAGAGTGAGG
CATTGATTCCTATGATTACCCAGACCCCTTGAATATGTCGGTTTGGCAAA
AGTCCATCATTCTAATTGTCATTTCTATCTGTACGTTGTTGACTATCCCA
GAAGTTTCTTTAACACTCCCTGATCGTGTGCAGTTTCATGTCTGGGTCTC
GCTTTGGTCAGTGGATTCGGAGGACTATTACAATTCTACATTCCAGGATA
TACTGCCGCGGGGAAGGACTATGATATATTACCCATTTGATGACATATCC
GACGTTGTTCATATGGATGACACCACAAAGAAAGATGTGGTATACGTGGA
AGACATGGAGGAGGGAGGATTGACGAGGGTTAAGGGGAAGGTGATGGGCA
CCGTGAAGATCACGGAGGGGACGGTGGTGTATATTCCTACTCCCACCGCT
GACCCACAGGGAGATTTTCTTCCTCCATGAACGCAGCAAAGCCCTTATGG
CACAACTAGCCATCCAGGTCACTCTAACCTCCGTATGGACACTATTCGCC
GGCCCAATCGCTGAGTCGATCACACCAGAGGGATGGTACGGGCTTGGAGC
CGGTCTTGCTGGAGCACTGCTTCTAGTTGCTCTTGTCCTCCTACCCGAAA
CAAAATATGACCGTCCTCTCACATCCTACCAGGAAACGGACTCCGACCCA
ACGAGCACATCTTCTGACCTGAAAAAGGACCTAGGAGCCGAGGTATGCAC
CATTCGCCCCGCCCTAGACTACGAGAGATACGCACCTCGTACATGGAAAT
CCGACATGCGACTCTGGGTCGGGAAGCCCCAGTGGACAGAGACCTGGGAC
GTGCTAAGAGTAAGTCCATATCTGTGCAGACAGAACCATCTTTACATCAT
TTCTAACCCCAGCCAGCAAACCTTCGAGCTCCTCTTCTTCCCGAACGTCC
TTTGGGCCCTGCTTCTCAACGGCCTCACAATCGGTGTAAACGTCGCCATT
GGCACCACCTACAGCACCATCCTCGCCGATCCACCCTACAACTGGCCCGA
CAGCAGCGCAAGCTACATCAACTGCGGCCAGATAATCGTCGCTATCGTCG
CCCTCCCCCTTCTCGGCCACGGCTCCGACTACTTAGTGAAATACTTCGCC
AATCGCAACAACGGCATCCACGAGCCGGAAATCCGCATCATCCCTCTCAT
TTTCCCTATCATTGTTGGCACCTTCACTGCCGCGCTATATGGCCAAGGCG
GCGCCCACCCGTACGAGTACCACTGGTTCATATATGCCTGGACGGTAGCA
GCATACTACTTCTGTTTTGTTGGAGCAAATATCGTTGGCATTACGTACCT
GCTTGATAGTTATCCTGGGAGATCGGGACCTTTGTTGGTTATTATCTGTG
CGTTTCGGGGTTTTATTTCCTTTGGGACGAGTTATGCCGTGTCGCCGTTC
ATTGCGCTTCATGGGTATGATGGGGCTTTTGGGACTTATGCGGCCTTGAC
GGCGGCTTTTGGGCTGTTGGGGATTCCGGTGTTTATTTGGGGGAAGCAGA
TTCGGAGGTTTACGGGGAGGTTTGCGAAGAATAAGACGGATTGAACCTAC
GAATGGCACCTTGGTGCCCGGATGGTGCTTGGCTTAGCAGCCGGACAGAG
TGAGGCATTGATTCCTATGATTACCCAGACCCCTTGAATATGTCGGTTTG
GCAAAAGTCCATCATTCTAATTGTCATTTCTATCTGTACGTTGTTGACTA
TCCCAGAAGTTTCTTTAACACTCCCTGATCGTGTGCAGTTTCATGTCTGG
GTCTCGCTTTGGTCAGTGGATTCGGAGGACTATTACAATTCTACATTCCA
GGATATACTGCCGCGGGGAAGGACTATGATATATTACCCATTTGATGACA
TATCCGACGTTGTTCATATGGATGACACCACAAAGAAAGATGTGGTATAC
GTGGAAGACATGGAGGAGGGAGGATTGACGAGGGTTAAGGGGAAGGTGAT
GGGCACCGTGAAGATCACGGAGGGGACGGTGGTGTATATTCCTACTCCCA
CCGCTGACCCACAGGGAGATTTTCTTCCTCCATGAACGCAGCAAAGCCCT
TATGGCACAACTAGCCATCCAGGTCACTCTAACCTCCGTATGGACACTAT
TCGCCGGCCCAATCGCTGAGTCGATCACACCAGAGGGATGGTACGGGCTT
GGAGCCGGTCTTGCTGGAGCACTGCTTCTAGTTGCTCTTGTCCTCCTACC
CGAAACAAAATATGACCGTCCTCTCACATCCTACCAGGAAACGGACTCCG
ACCCAACGAGCACATCTTCTGACCTGAAAAAGGACCTAGGAGCCGAGGTA
TGCACCATTCGCCCCGCCCTAGACTACGAGAGATACGCACCTCGTACATG
GAAATCCGACATGCGACTCTGGGTCGGGAAGCCCCAGTGGACAGAGACCT
GGGACGTGCTAAGAGTAAGTCCATATCTGTGCAGACAGAACCATCTTTAC
ATCATTTCTAACCCCAGCCAGCAAACCTTCGAGCTCCTCTTCTTCCCGAA
CGTCCTTTGGGCCCTGCTTCTCAACGGCCTCACAATCGGTGTAAACGTCG
CCATTGGCACCACCTACAGCACCATCCTCGCCGATCCACCCTACAACTGG
CCCGACAGCAGCGCAAGCTACATCAACTGCGGCCAGATAATCGTCGCTAT
CGTCGCCCTCCCCCTTCTCGGCCACGGCTCCGACTACTTAGTGAAATACT
TCGCCAATCGCAACAACGGCATCCACGAGCCGGAAATCCGCATCATCCCT
CTCATTTTCCCTATCATTGTTGGCACCTTCACTGCCGCGCTATATGGCCA
AGGCGGCGCCCACCCGTACGAGTACCACTGGTTCATATATGCCTGGACGG
TAGCAGCATACTACTTCTGTTTTGTTGGAGCAAATATCGTTGGCATTACG
TACCTGCTTGATAGTTATCCTGGGAGATCGGGACCTTTGTTGGTTATTAT
CTGTGCGTTTCGGGGTTTTATTTCCTTTGGGACGAGTTATGCCGTGTCGC
CGTTCATTGCGCTTCATGGGTATGATGGGGCTTTTGGGACTTATGCGGCC
TTGACGGCGGCTTTTGGGCTGTTGGGGATTCCGGTGTTTATTTGGGGGAA
GCAGATTCGGAGGTTTACGGGGAGGTTTGCGAAGAATAAGACGGATTGAA
CCTACGAATGGCACCTTGGTGCCCGGATGGTGCTTGGCTTAGCAGCCGGA
CAGAGTGAGGCATTGATTCCTATGATTACCCAGACCCCTTGAATATGTCG
GTTTGGCAAAAGTCCATCATTCTAATTGTCATTTCTATCTGTACGTTGTT
GACTATCCCAGAAGTTTCTTTAACACTCCCTGATCGTGTGCAGTTTCATG
TCTGGGTCTCGCTTTGGTCAGTGGATTCGGAGGACTATTACAATTCTACA
TTCCAGGATATACTGCCGCGGGGAAGGACTATGATATATTACCCATTTGA
TGACATATCCGACGTTGTTCATATGGATGACACCACAAAGAAAGATGTGG
TATACGTGGAAGACATGGAGGAGGGAGGATTGACGAGGGTTAAGGGGAAG
GTGATGGGCACCGTGAAGATCACGGAGGGGACGGTGGTGTATATTCCTAC
TCCCACCGCTGACCCACAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An13 | supercontig | An13:540239..542108 - |
|
