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Sequences
The following sequences are available for this feature:
mRNA from alignment at An13:551691..552767+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008424-T1 ID=CBS51388_008424-T1|Name=CBS51388_008424-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1077bp|location=Sequence derived from alignment at An13:551691..552767+ (Aspergillus niger CBS 513.88)
ATGGCCCCCGACATTCCCAGGCCACCGACTCTTCGCCGGTCATGCCAAGC
CTGCGCGCGCGGCAAACGCCGCTGTGACCAGCGCTGGCCGCGCTGCACCC
GGTGCCAAACCCGGAAGATAGACTGCGAATACATCAACGTCCCATTAACG
GTGGGCTCCGACACAGGCTCAACAGCTACCACAACAACAATCACTACCAG
ATCAACGCTCTCACCGAAACTCCCTCACAAGAAGCCAAGACAGCATTACC
AACTAACGACAACACACTCCATCCCTCTTTCCCTCCCCTTAGAAATCACA
AAGGGCTACTCCCAACCCATCATTGCATACCTAGTCTCAGGCATGCGCGC
ATACCCATCCACCTTCGCCCTGAACATGAAAACCCACTTCATCCACCCAG
ACCTATGGCCCAGTCCATCTTCTCCCCCGTTACCTATCAGGGACATTCAC
GCCCTGTGTAAACTACACTCCACCAGCACAAACAAAACCATCATTCCCCT
CCTCAAACAGAAATCCTCCTCCCTCCTCCGCACCCTCAACCACACCACCA
GCTTTGAGGAAATGCTAGCCACCGCGCAGGCCCTCCTCCTCACGCAATGC
ATGCTCGTTTTTTCCGATACAGACACATCCCAATCCTACTCCGAATCAAT
CAGCACTATGCTCTACAATCTCGGCCAGAAACTCTGGCAACAAGCCCCCA
TCCAACTACCAGGCAGTTTGAGCCCGCGCAGAGCGTGGCTGTTCGCTGAG
AGTGTGCGGAGGACGATCATCGTGGGGTTCATGCTGCGGAGCGTGTACTC
GCTCAAGATGCGGAATTATTCCGTCCGCACGCCGTTCGTGGATTCATTGC
CGTTTGATATGAGGACTGGGTTGTGGGATCGGGATGTTGATGTTGGTGGG
GATGCGAGTGGGGAGTCGCTGGATGCGATGGTCTCGTTGCATCAGTATTC
AGGCATGTTGGAAAGTGGCATGGTTCATGGGATCTCGGAATTTGGGGGGT
TGATTCTTGCCGCGTGTAGAGGGAGGGCGGTGCAGGGCGTGCCGTATCCT
TCTGTTACTGGGTATGCGGGGTACTAA back to topCoding sequence (CDS) from alignment at An13:551691..552767+ >CBS51388_008424-T1 ID=CBS51388_008424-T1|Name=CBS51388_008424-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1077bp|location=Sequence derived from alignment at An13:551691..552767+ (Aspergillus niger CBS 513.88)
ATGGCCCCCGACATTCCCAGGCCACCGACTCTTCGCCGGTCATGCCAAGC
CTGCGCGCGCGGCAAACGCCGCTGTGACCAGCGCTGGCCGCGCTGCACCC
GGTGCCAAACCCGGAAGATAGACTGCGAATACATCAACGTCCCATTAACG
GTGGGCTCCGACACAGGCTCAACAGCTACCACAACAACAATCACTACCAG
ATCAACGCTCTCACCGAAACTCCCTCACAAGAAGCCAAGACAGCATTACC
AACTAACGACAACACACTCCATCCCTCTTTCCCTCCCCTTAGAAATCACA
AAGGGCTACTCCCAACCCATCATTGCATACCTAGTCTCAGGCATGCGCGC
ATACCCATCCACCTTCGCCCTGAACATGAAAACCCACTTCATCCACCCAG
ACCTATGGCCCAGTCCATCTTCTCCCCCGTTACCTATCAGGGACATTCAC
GCCCTGTGTAAACTACACTCCACCAGCACAAACAAAACCATCATTCCCCT
CCTCAAACAGAAATCCTCCTCCCTCCTCCGCACCCTCAACCACACCACCA
GCTTTGAGGAAATGCTAGCCACCGCGCAGGCCCTCCTCCTCACGCAATGC
ATGCTCGTTTTTTCCGATACAGACACATCCCAATCCTACTCCGAATCAAT
CAGCACTATGCTCTACAATCTCGGCCAGAAACTCTGGCAACAAGCCCCCA
TCCAACTACCAGGCAGTTTGAGCCCGCGCAGAGCGTGGCTGTTCGCTGAG
AGTGTGCGGAGGACGATCATCGTGGGGTTCATGCTGCGGAGCGTGTACTC
GCTCAAGATGCGGAATTATTCCGTCCGCACGCCGTTCGTGGATTCATTGC
CGTTTGATATGAGGACTGGGTTGTGGGATCGGGATGTTGATGTTGGTGGG
GATGCGAGTGGGGAGTCGCTGGATGCGATGGTCTCGTTGCATCAGTATTC
AGGCATGTTGGAAAGTGGCATGGTTCATGGGATCTCGGAATTTGGGGGGT
TGATTCTTGCCGCGTGTAGAGGGAGGGCGGTGCAGGGCGTGCCGTATCCT
TCTGTTACTGGGTATGCGGGGTACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An13 | supercontig | An13:551691..552767 + |
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