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CBS51388_008427-T1, CBS51388_008427-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008427-T1
Unique NameCBS51388_008427-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An13:557514..558600+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008427-T1 ID=CBS51388_008427-T1|Name=CBS51388_008427-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1087bp|location=Sequence derived from alignment at An13:557514..558600+ (Aspergillus niger CBS 513.88)
ATGGTAGTCCTCGCCGATATCCAATCCTCCAATGCCCGGATTGCTACATC
CCTTCCCCAGGGCATGGTAGCTGTCTTTGTCGGAGCAACAAGTGGCATTG
GCGAAGCAACCCTCAAGCAATTCGCTAAGCATGCTACACGGCCCCGCGTC
TATTTTGTCGGTCGCAAACAAGACGCGGGTAACCGTATCGTCGCCGAATG
TGAAGCCCTGAATCCAGAGGGGGAATATATCTTCATCCCCGCAGACGTGA
GCTTGCTCAGCAATGTCGACGAGGTCTGTCGTAACATCAAGACCAAGGAA
AGCACTCTCAATCTTCTGGTTCTCACGCCGGGAATAGCGGCTATACATAG
TGGTGGGTGATCTCAGCGAATATATATCCCGGACCGTGGCGTGAAAGTAC
TCCGAATGTACGACTGATATCTATTCTGCAGAAACACCCGAAGGACTTCG
CAAGATCACCTCCCTCCTCTACTTCGCCCGCATACGCTTCATCCTAAACC
TCCTCCCTCTCCTCCAACAAGCCACCAGCCTCCGCCGCGTCATAACTGTC
GGGGCAGCCGGATCCGAAGGCCCCATCGACACCACCGACTTCGAAGGCAG
AAAGGTGTCAGCCCCCTTTTTTCGCGGGCATATCACGTCATTAACTACGG
TGGCTCTGGAGACCTTAGCTGAGAAAGCCCCAACCGTATCGTTCATCAAT
ACTCACCCCGGAGCTGTACAAACCGGGATAACCAGAGAGGTGGATAATCT
CCGTATGTGGATTGTCTGGCTTGCTCTCCTGCTGTTCGGCCGTTGGGTCT
GTATCCCTGTGATAGAGAGCGGAGAGAGACATCTCTTTGTGGCTACGAGT
GCGAAGTATCCGGCGCGGGATGGGGACGACGGGGTGCCGCTGTCGGAGAG
TGTCGTGGTTGCGCGGGGTGTGGATGGAAAGTTGCGAGGGGGTGTTTATT
GTGTTACCTCGGATGGGGAGAGCTCGGATAATGCGATTGAGGTTCTGAAA
GGCTTGCGAGAAATGGGCATTGGAGAGATTGTCTGGAGGTATACGGAGAG
TCAGTTCAAGCGGATCACCGGGGGGCAAGCAATATAA
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Coding sequence (CDS) from alignment at An13:557514..558600+

>CBS51388_008427-T1 ID=CBS51388_008427-T1|Name=CBS51388_008427-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2016bp|location=Sequence derived from alignment at An13:557514..558600+ (Aspergillus niger CBS 513.88)
ATGGTAGTCCTCGCCGATATCCAATCCTCCAATGCCCGGATTGCTACATC
CCTTCCCCAGGGCATGGTAGCTGTCTTTGTCGGAGCAACAAGTGGCATTG
GCGAAGCAACCCTCAAGCAATTCGCTAAGCATGCTACACGGCCCCGCGTC
TATTTTGTCGGTCGCAAACAAGACGCGGGTAACCGTATCGTCGCCGAATG
TGAAGCCCTGAATCCAGAGGGGGAATATATCTTCATCCCCGCAGACGTGA
GCTTGCTCAGCAATGTCGACGAGGTCTGTCGTAACATCAAGACCAAGGAA
AGCACTCTCAATCTTCTGGTTCTCACGCCGGGAATAGCGGCTATACATAG
TGAAACACCCGAAGGACTTCGCAAGATCACCTCCCTCCTCTACTTCGCCC
GCATACGCTTCATCCTAAACCTCCTCCCTCTCCTCCAACAAGCCACCAGC
CTCCGCCGCGTCATAACTGTCGGGGCAGCCGGATCCGAAGGCCCCATCGA
CACCACCGACTTCGAAGGCAGAAAGGTGTCAGCCCCCTTTTTTCGCGGGC
ATATCACGTCATTAACTACGGTGGCTCTGGAGACCTTAGCTGAGAAAGCC
CCAACCGTATCGTTCATCAATACTCACCCCGGAGCTGTACAAACCGGGAT
AACCAGAGAGGTGGATAATCTCCGTATGTGGATTGTCTGGCTTGCTCTCC
TGCTGTTCGGCCGTTGGGTCTGTATCCCTGTGATAGAGAGCGGAGAGAGA
CATCTCTTTGTGGCTACGAGTGCGAAGTATCCGGCGCGGGATGGGGACGA
CGGGGTGCCGCTGTCGGAGAGTGTCGTGGTTGCGCGGGGTGTGGATGGAA
AGTTGCGAGGGGGTGTTTATTGTGTTACCTCGGATGGGGAGAGCTCGGAT
AATGCGATTGAGGTTCTGAAAGGCTTGCGAGAAATGGGCATTGGAGAGAT
TGTCTGGAGGTATACGGAGAGTCAGTTCAAGCGGATCACCGGGGGGCAAG
CAATATAAATGGTAGTCCTCGCCGATATCCAATCCTCCAATGCCCGGATT
GCTACATCCCTTCCCCAGGGCATGGTAGCTGTCTTTGTCGGAGCAACAAG
TGGCATTGGCGAAGCAACCCTCAAGCAATTCGCTAAGCATGCTACACGGC
CCCGCGTCTATTTTGTCGGTCGCAAACAAGACGCGGGTAACCGTATCGTC
GCCGAATGTGAAGCCCTGAATCCAGAGGGGGAATATATCTTCATCCCCGC
AGACGTGAGCTTGCTCAGCAATGTCGACGAGGTCTGTCGTAACATCAAGA
CCAAGGAAAGCACTCTCAATCTTCTGGTTCTCACGCCGGGAATAGCGGCT
ATACATAGTGAAACACCCGAAGGACTTCGCAAGATCACCTCCCTCCTCTA
CTTCGCCCGCATACGCTTCATCCTAAACCTCCTCCCTCTCCTCCAACAAG
CCACCAGCCTCCGCCGCGTCATAACTGTCGGGGCAGCCGGATCCGAAGGC
CCCATCGACACCACCGACTTCGAAGGCAGAAAGGTGTCAGCCCCCTTTTT
TCGCGGGCATATCACGTCATTAACTACGGTGGCTCTGGAGACCTTAGCTG
AGAAAGCCCCAACCGTATCGTTCATCAATACTCACCCCGGAGCTGTACAA
ACCGGGATAACCAGAGAGGTGGATAATCTCCGTATGTGGATTGTCTGGCT
TGCTCTCCTGCTGTTCGGCCGTTGGGTCTGTATCCCTGTGATAGAGAGCG
GAGAGAGACATCTCTTTGTGGCTACGAGTGCGAAGTATCCGGCGCGGGAT
GGGGACGACGGGGTGCCGCTGTCGGAGAGTGTCGTGGTTGCGCGGGGTGT
GGATGGAAAGTTGCGAGGGGGTGTTTATTGTGTTACCTCGGATGGGGAGA
GCTCGGATAATGCGATTGAGGTTCTGAAAGGCTTGCGAGAAATGGGCATT
GGAGAGATTGTCTGGAGGTATACGGAGAGTCAGTTCAAGCGGATCACCGG
GGGGCAAGCAATATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008427CBS51388_008427Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008427-T1.exon1CBS51388_008427-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_008427-T1.exon2CBS51388_008427-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008427-T1.cdsCBS51388_008427-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008427-T1CBS51388_008427-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An13supercontigAn13:557514..558600 +
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