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Sequences
The following sequences are available for this feature:
mRNA from alignment at An13:559794..561487+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008428-T1 ID=CBS51388_008428-T1|Name=CBS51388_008428-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1694bp|location=Sequence derived from alignment at An13:559794..561487+ (Aspergillus niger CBS 513.88)
ATGGTGCACCCGGTTAGGTCTCTCAACAAAGAGCTCGATCGTAAGTGTAA
ATGGAATAAGTAATGTTTCCCGCTAACAGCTCGTAGAGGTCGACACCGAA
TCGAGAGGTTATCGATCGTCTGACACAACGGAGGGCGGATCTTCCAAGGT
CGAAGACGGTGATGAGCCTATCGAAGAGACCTCCAGGAGGGGCGTCTCTC
GCAACAAAAGTCATGGAACTCAACGCACAAATTTCTCGCGAAACAAAAGC
CATGCCAGTCACCGCACTGGCGTATCTCAAAATCAGAGTTATCGAAGCCA
GCCTCCCGCTACCCTGAGGAACCAAAGCTATGGGAGTCAAGCACAGTTCT
CCCTGGCAGGTCCGAATGCGTATTATGGACCACTACCTCAACAGGGCGCC
TACATGCATCCGGAGTATCAGTCATTTAATCCTCAATACGGAAACATGCA
AGGGGACAAGCCTGTCTGGAGTCTAGCGCAGCCGCTGCCCCATGTTGTCC
GAGACGGAATGCGGTATGGAGCCTTGCCGGAGGATCGAAAGGAAGAAAGA
GACGAGGATGGACGAGAACGCCCGCCTCCAGCGTCAGAAGAGCCGCCCAC
GGATATTCCGAAGACGGATGAAGCTAGAGAGAATGGCGAAGAGCCCCAGA
ATGAGATGGGATTTTTCAATAAGTGGTCCAAGATTCGATATTATCTGAGG
GAGCCATTGGGCGAGTGGTTGGGGGTGAGTATTCACTTGGACTATCTATT
CTAATACAGCCCAAACTAACACACAATCACCAGACAACCATCGCCATCAC
TCTCGGTCTCTGCGGCGGGTTGTCAACCTACACATCGGACGGCCAAGCCG
GCTCATGGATGACCCAGAGTGCCTGTTGGGGCTTCAGCTTCATGATCGGC
ATCTACATTGTTGGTGGCATCTCCGGTGGCCACCTCAATCCCGCCATCAC
AATCTCCATGTCCCTCTGGCGAGGATTTCCCGCCCGCCGATGTGTTATTT
ACATCCTCGCTCAGCTGATCGGCGCCATCACCGCCGGCGGATTCGCCTAC
GCCATTTACCACGACGCCATCGTCAACCTCTCCGTCGAGACCAACCTCCC
ACAAAGCGAAACAACAGCTAGCCAAGCATTTCTAACTCTACCAAAACAAT
TCGTCAGTCCAGCTACTGCATTCTTCAATGAGTTCCTAGGCACCGCTATT
CTCGTCGGAACCATCATGGCCTTGGGTGACGACACCAACGCCCCCCCAGG
AGCAGGAATGCAAGCATTCATCATCGGCATACTGATCACCGTATTAGTCC
TTGCCCTAGGATATAACACAGGCGGGTACGTACCCCCTCTCTCCCCCACC
CCAGAAGCCCCGACGACTAATAATTACCAAGAGCATTCAACGGCCCCCGC
GACTTCGGCCCCCGGCTCGTCGCCGTAATGGCCGGGTGGGGCGGACACCT
CTTCAAAGAGTACCATGCCTGGTGGATCTGGGGCCCTTGGGTCGCCGACA
TCTTCGGAGGATTGTTCGGGGCGTTCATCTACGATTTAGTGGTGTTCACT
GGTGGCGAAAGCCCGATCAATTACCCGCCGAGGAGACGCAAGCGCGCACT
GCTGATCAAGGAGAAGAATCTGAGAAGCAAGTTGCGTTTTGGGAGGAGGA
AGATCGGGGATATTGAGAGGGCAGTTGAGGAGAACCAGGATTGA back to topCoding sequence (CDS) from alignment at An13:559794..561487+ >CBS51388_008428-T1 ID=CBS51388_008428-T1|Name=CBS51388_008428-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6132bp|location=Sequence derived from alignment at An13:559794..561487+ (Aspergillus niger CBS 513.88)
ATGGTGCACCCGGTTAGGTCTCTCAACAAAGAGCTCGATCAGGTCGACAC
CGAATCGAGAGGTTATCGATCGTCTGACACAACGGAGGGCGGATCTTCCA
AGGTCGAAGACGGTGATGAGCCTATCGAAGAGACCTCCAGGAGGGGCGTC
TCTCGCAACAAAAGTCATGGAACTCAACGCACAAATTTCTCGCGAAACAA
AAGCCATGCCAGTCACCGCACTGGCGTATCTCAAAATCAGAGTTATCGAA
GCCAGCCTCCCGCTACCCTGAGGAACCAAAGCTATGGGAGTCAAGCACAG
TTCTCCCTGGCAGGTCCGAATGCGTATTATGGACCACTACCTCAACAGGG
CGCCTACATGCATCCGGAGTATCAGTCATTTAATCCTCAATACGGAAACA
TGCAAGGGGACAAGCCTGTCTGGAGTCTAGCGCAGCCGCTGCCCCATGTT
GTCCGAGACGGAATGCGGTATGGAGCCTTGCCGGAGGATCGAAAGGAAGA
AAGAGACGAGGATGGACGAGAACGCCCGCCTCCAGCGTCAGAAGAGCCGC
CCACGGATATTCCGAAGACGGATGAAGCTAGAGAGAATGGCGAAGAGCCC
CAGAATGAGATGGGATTTTTCAATAAGTGGTCCAAGATTCGATATTATCT
GAGGGAGCCATTGGGCGAGTGGTTGGGGACAACCATCGCCATCACTCTCG
GTCTCTGCGGCGGGTTGTCAACCTACACATCGGACGGCCAAGCCGGCTCA
TGGATGACCCAGAGTGCCTGTTGGGGCTTCAGCTTCATGATCGGCATCTA
CATTGTTGGTGGCATCTCCGGTGGCCACCTCAATCCCGCCATCACAATCT
CCATGTCCCTCTGGCGAGGATTTCCCGCCCGCCGATGTGTTATTTACATC
CTCGCTCAGCTGATCGGCGCCATCACCGCCGGCGGATTCGCCTACGCCAT
TTACCACGACGCCATCGTCAACCTCTCCGTCGAGACCAACCTCCCACAAA
GCGAAACAACAGCTAGCCAAGCATTTCTAACTCTACCAAAACAATTCGTC
AGTCCAGCTACTGCATTCTTCAATGAGTTCCTAGGCACCGCTATTCTCGT
CGGAACCATCATGGCCTTGGGTGACGACACCAACGCCCCCCCAGGAGCAG
GAATGCAAGCATTCATCATCGGCATACTGATCACCGTATTAGTCCTTGCC
CTAGGATATAACACAGGCGGAGCATTCAACGGCCCCCGCGACTTCGGCCC
CCGGCTCGTCGCCGTAATGGCCGGGTGGGGCGGACACCTCTTCAAAGAGT
ACCATGCCTGGTGGATCTGGGGCCCTTGGGTCGCCGACATCTTCGGAGGA
TTGTTCGGGGCGTTCATCTACGATTTAGTGGTGTTCACTGGTGGCGAAAG
CCCGATCAATTACCCGCCGAGGAGACGCAAGCGCGCACTGCTGATCAAGG
AGAAGAATCTGAGAAGCAAGTTGCGTTTTGGGAGGAGGAAGATCGGGGAT
ATTGAGAGGGCAGTTGAGGAGAACCAGGATTGAATGGTGCACCCGGTTAG
GTCTCTCAACAAAGAGCTCGATCAGGTCGACACCGAATCGAGAGGTTATC
GATCGTCTGACACAACGGAGGGCGGATCTTCCAAGGTCGAAGACGGTGAT
GAGCCTATCGAAGAGACCTCCAGGAGGGGCGTCTCTCGCAACAAAAGTCA
TGGAACTCAACGCACAAATTTCTCGCGAAACAAAAGCCATGCCAGTCACC
GCACTGGCGTATCTCAAAATCAGAGTTATCGAAGCCAGCCTCCCGCTACC
CTGAGGAACCAAAGCTATGGGAGTCAAGCACAGTTCTCCCTGGCAGGTCC
GAATGCGTATTATGGACCACTACCTCAACAGGGCGCCTACATGCATCCGG
AGTATCAGTCATTTAATCCTCAATACGGAAACATGCAAGGGGACAAGCCT
GTCTGGAGTCTAGCGCAGCCGCTGCCCCATGTTGTCCGAGACGGAATGCG
GTATGGAGCCTTGCCGGAGGATCGAAAGGAAGAAAGAGACGAGGATGGAC
GAGAACGCCCGCCTCCAGCGTCAGAAGAGCCGCCCACGGATATTCCGAAG
ACGGATGAAGCTAGAGAGAATGGCGAAGAGCCCCAGAATGAGATGGGATT
TTTCAATAAGTGGTCCAAGATTCGATATTATCTGAGGGAGCCATTGGGCG
AGTGGTTGGGGACAACCATCGCCATCACTCTCGGTCTCTGCGGCGGGTTG
TCAACCTACACATCGGACGGCCAAGCCGGCTCATGGATGACCCAGAGTGC
CTGTTGGGGCTTCAGCTTCATGATCGGCATCTACATTGTTGGTGGCATCT
CCGGTGGCCACCTCAATCCCGCCATCACAATCTCCATGTCCCTCTGGCGA
GGATTTCCCGCCCGCCGATGTGTTATTTACATCCTCGCTCAGCTGATCGG
CGCCATCACCGCCGGCGGATTCGCCTACGCCATTTACCACGACGCCATCG
TCAACCTCTCCGTCGAGACCAACCTCCCACAAAGCGAAACAACAGCTAGC
CAAGCATTTCTAACTCTACCAAAACAATTCGTCAGTCCAGCTACTGCATT
CTTCAATGAGTTCCTAGGCACCGCTATTCTCGTCGGAACCATCATGGCCT
TGGGTGACGACACCAACGCCCCCCCAGGAGCAGGAATGCAAGCATTCATC
ATCGGCATACTGATCACCGTATTAGTCCTTGCCCTAGGATATAACACAGG
CGGAGCATTCAACGGCCCCCGCGACTTCGGCCCCCGGCTCGTCGCCGTAA
TGGCCGGGTGGGGCGGACACCTCTTCAAAGAGTACCATGCCTGGTGGATC
TGGGGCCCTTGGGTCGCCGACATCTTCGGAGGATTGTTCGGGGCGTTCAT
CTACGATTTAGTGGTGTTCACTGGTGGCGAAAGCCCGATCAATTACCCGC
CGAGGAGACGCAAGCGCGCACTGCTGATCAAGGAGAAGAATCTGAGAAGC
AAGTTGCGTTTTGGGAGGAGGAAGATCGGGGATATTGAGAGGGCAGTTGA
GGAGAACCAGGATTGAATGGTGCACCCGGTTAGGTCTCTCAACAAAGAGC
TCGATCAGGTCGACACCGAATCGAGAGGTTATCGATCGTCTGACACAACG
GAGGGCGGATCTTCCAAGGTCGAAGACGGTGATGAGCCTATCGAAGAGAC
CTCCAGGAGGGGCGTCTCTCGCAACAAAAGTCATGGAACTCAACGCACAA
ATTTCTCGCGAAACAAAAGCCATGCCAGTCACCGCACTGGCGTATCTCAA
AATCAGAGTTATCGAAGCCAGCCTCCCGCTACCCTGAGGAACCAAAGCTA
TGGGAGTCAAGCACAGTTCTCCCTGGCAGGTCCGAATGCGTATTATGGAC
CACTACCTCAACAGGGCGCCTACATGCATCCGGAGTATCAGTCATTTAAT
CCTCAATACGGAAACATGCAAGGGGACAAGCCTGTCTGGAGTCTAGCGCA
GCCGCTGCCCCATGTTGTCCGAGACGGAATGCGGTATGGAGCCTTGCCGG
AGGATCGAAAGGAAGAAAGAGACGAGGATGGACGAGAACGCCCGCCTCCA
GCGTCAGAAGAGCCGCCCACGGATATTCCGAAGACGGATGAAGCTAGAGA
GAATGGCGAAGAGCCCCAGAATGAGATGGGATTTTTCAATAAGTGGTCCA
AGATTCGATATTATCTGAGGGAGCCATTGGGCGAGTGGTTGGGGACAACC
ATCGCCATCACTCTCGGTCTCTGCGGCGGGTTGTCAACCTACACATCGGA
CGGCCAAGCCGGCTCATGGATGACCCAGAGTGCCTGTTGGGGCTTCAGCT
TCATGATCGGCATCTACATTGTTGGTGGCATCTCCGGTGGCCACCTCAAT
CCCGCCATCACAATCTCCATGTCCCTCTGGCGAGGATTTCCCGCCCGCCG
ATGTGTTATTTACATCCTCGCTCAGCTGATCGGCGCCATCACCGCCGGCG
GATTCGCCTACGCCATTTACCACGACGCCATCGTCAACCTCTCCGTCGAG
ACCAACCTCCCACAAAGCGAAACAACAGCTAGCCAAGCATTTCTAACTCT
ACCAAAACAATTCGTCAGTCCAGCTACTGCATTCTTCAATGAGTTCCTAG
GCACCGCTATTCTCGTCGGAACCATCATGGCCTTGGGTGACGACACCAAC
GCCCCCCCAGGAGCAGGAATGCAAGCATTCATCATCGGCATACTGATCAC
CGTATTAGTCCTTGCCCTAGGATATAACACAGGCGGAGCATTCAACGGCC
CCCGCGACTTCGGCCCCCGGCTCGTCGCCGTAATGGCCGGGTGGGGCGGA
CACCTCTTCAAAGAGTACCATGCCTGGTGGATCTGGGGCCCTTGGGTCGC
CGACATCTTCGGAGGATTGTTCGGGGCGTTCATCTACGATTTAGTGGTGT
TCACTGGTGGCGAAAGCCCGATCAATTACCCGCCGAGGAGACGCAAGCGC
GCACTGCTGATCAAGGAGAAGAATCTGAGAAGCAAGTTGCGTTTTGGGAG
GAGGAAGATCGGGGATATTGAGAGGGCAGTTGAGGAGAACCAGGATTGAA
TGGTGCACCCGGTTAGGTCTCTCAACAAAGAGCTCGATCAGGTCGACACC
GAATCGAGAGGTTATCGATCGTCTGACACAACGGAGGGCGGATCTTCCAA
GGTCGAAGACGGTGATGAGCCTATCGAAGAGACCTCCAGGAGGGGCGTCT
CTCGCAACAAAAGTCATGGAACTCAACGCACAAATTTCTCGCGAAACAAA
AGCCATGCCAGTCACCGCACTGGCGTATCTCAAAATCAGAGTTATCGAAG
CCAGCCTCCCGCTACCCTGAGGAACCAAAGCTATGGGAGTCAAGCACAGT
TCTCCCTGGCAGGTCCGAATGCGTATTATGGACCACTACCTCAACAGGGC
GCCTACATGCATCCGGAGTATCAGTCATTTAATCCTCAATACGGAAACAT
GCAAGGGGACAAGCCTGTCTGGAGTCTAGCGCAGCCGCTGCCCCATGTTG
TCCGAGACGGAATGCGGTATGGAGCCTTGCCGGAGGATCGAAAGGAAGAA
AGAGACGAGGATGGACGAGAACGCCCGCCTCCAGCGTCAGAAGAGCCGCC
CACGGATATTCCGAAGACGGATGAAGCTAGAGAGAATGGCGAAGAGCCCC
AGAATGAGATGGGATTTTTCAATAAGTGGTCCAAGATTCGATATTATCTG
AGGGAGCCATTGGGCGAGTGGTTGGGGACAACCATCGCCATCACTCTCGG
TCTCTGCGGCGGGTTGTCAACCTACACATCGGACGGCCAAGCCGGCTCAT
GGATGACCCAGAGTGCCTGTTGGGGCTTCAGCTTCATGATCGGCATCTAC
ATTGTTGGTGGCATCTCCGGTGGCCACCTCAATCCCGCCATCACAATCTC
CATGTCCCTCTGGCGAGGATTTCCCGCCCGCCGATGTGTTATTTACATCC
TCGCTCAGCTGATCGGCGCCATCACCGCCGGCGGATTCGCCTACGCCATT
TACCACGACGCCATCGTCAACCTCTCCGTCGAGACCAACCTCCCACAAAG
CGAAACAACAGCTAGCCAAGCATTTCTAACTCTACCAAAACAATTCGTCA
GTCCAGCTACTGCATTCTTCAATGAGTTCCTAGGCACCGCTATTCTCGTC
GGAACCATCATGGCCTTGGGTGACGACACCAACGCCCCCCCAGGAGCAGG
AATGCAAGCATTCATCATCGGCATACTGATCACCGTATTAGTCCTTGCCC
TAGGATATAACACAGGCGGAGCATTCAACGGCCCCCGCGACTTCGGCCCC
CGGCTCGTCGCCGTAATGGCCGGGTGGGGCGGACACCTCTTCAAAGAGTA
CCATGCCTGGTGGATCTGGGGCCCTTGGGTCGCCGACATCTTCGGAGGAT
TGTTCGGGGCGTTCATCTACGATTTAGTGGTGTTCACTGGTGGCGAAAGC
CCGATCAATTACCCGCCGAGGAGACGCAAGCGCGCACTGCTGATCAAGGA
GAAGAATCTGAGAAGCAAGTTGCGTTTTGGGAGGAGGAAGATCGGGGATA
TTGAGAGGGCAGTTGAGGAGAACCAGGATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0015267 | channel activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022357 |
| DBxref | InterPro:IPR023271 |
| DBxref | InterPro:IPR000425 |
| DBxref | PFAM:PF00230 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An13 | supercontig | An13:559794..561487 + |
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