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Sequences
The following sequences are available for this feature:
mRNA from alignment at An13:562120..564033- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008429-T1 ID=CBS51388_008429-T1|Name=CBS51388_008429-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1914bp|location=Sequence derived from alignment at An13:562120..564033- (Aspergillus niger CBS 513.88)
ATGAGTGAGCAAGAGAATCCTATCATCCTTCACTGCATTTATTGCAACCA
TGAACACCCTGAGCTCGATGGGGATGCTCTCTACGAGCACATTGAACAGA
ATCTCGATGACCTTAATAGACGTTTCAGGGAAAGAAGAGCCCTCAACGAG
GAGCATCATACGATCATCGACTGCCCAATGTGGCCTGGTTGCCGTCACAG
GCCTCTGACCTCTCTAGAGGGGGACGGCCATGCAATTAGCTGGACATACG
TGGAAATAGCATATGACACGATGGGGGACCATAAGGAATTTATTTCTTGC
GAATTATGCGGCACCCGTCATGTCATATTGACTGGACAATTCCTCGAAAT
TCACATCCGCGATTGCCATAGCTTAGTGTTCGAGATTCCCATGGTTGCGC
ACCCTTCGCCATCTGAACTAACTGAACTCCCACCGTCAACGATGTCTGGA
TCTGACCCCATGGAGCCCGAAGCAGCAGAGGAGTCTCAGGTGGACGTGTC
TGAAGCTGATGTAGTTGAAGCGGAGGATGCTAGGGCGCAGGGGTCCGCAG
AGGAGGCCGCCGCCGAAGCCGAGTACGACTCCGAAGAGGAAGAACCCGAA
GACCTACCTCATGACCTCGGACCATTCCGCACGAGTCTCGAGCAAGCACT
TTCGAATAACATCTTGACTGTCGAGAACTTCGCACAGGTTATATGCACCA
TATGCCGTGATCATAGAGTTCCCGTCAAACACCTTCCCCGGCTCAATTTC
TATAACGCTCTTCGAGCCAGGCTTGCTCCGCTTCTAGATCAATTGATGTA
CAATCCCAGGGTCCACAACAATAATCGAGTGACCGCCCAATATGCCACGC
GCAGAATCCAAGGGACCACCATTGGCGAAGCTATCCTTGAAAACAAAGTC
AGGCCGATCCAGGTTCTCTGTGATCTAGGGTTCCGCATCAACGATATTAT
GCACAGCAACCTGACCGTGCTGGGTGCGGCCATCCTACGCCAGCAAAGCA
AAATCGCCCAATACCTCCTGAACCCTGAATTCAAGGAAAAGTACGGCGTC
GACCCTTTCCGTCCCGTAACTCTGGACACTAGATTTGCAGACAGCACCAC
TCCGATTGCCCTATGCGTGAACAGATATGAGTACGGGGTCCTAAAAACCA
TCCTCAGCTACGAGACACCCCCGAACGTCATGCGAACCGAAGACGTAAAT
CAGCTCTTCCGATCGCAGCTATGGAACCGCCTTAGCCATATAGTCCACGA
CCAATACTTCAGGGACGCCATCTTCGCGGCACGCAACGCTCCCATCTCCC
CGATCCACTGCGCTGTTGTCAACCCTGACCTTTTCGTCCTGCGAAACCTC
GTCTGGGTCCGAGCAGATCACCCAAACATACTCCCCGATTTAGCCGATCA
CATCAACGCCGAGAACAACACCATAATCCAGAACGCAACCCCTCTCCTTC
TCGCCCTCCACCGCCAAAACGCAGAAGCTCTGACTATCCTCCTCAAAACT
CCCGGCATCGACCCCTCACGGCCAAACTCCCGCATGCTCACTCCCCTATA
TTACGCTGCCCGCATAGCTAATCTCGAACTAGCCCGCATCCTAATAGAGT
ACCGTGCTGATCCGAGAGTTGTCACAGCCATGGGCACGCCGCTTCATGCA
CTGGTGCATACGTATAGGGAAGCCAAGGAACGGCGCATGGCTGAGAACCC
CCAGGAGTGGGCATTCCTCAAAGAAAAGCTTGCACGGCTTCAGCTTCTTT
TCTTGGAGAGTGGCGTCGACCCAGATGCTAGGCCTGATGGGGCTGATGCC
ATGGGCAGGACGGCTGGCGAGGAGGCTGAGCTCGTGGAGTATTGGGAGTT
TTCGAATGTGCTTGTTGCGTTTAGAAATGCTGCTGCTGCTCCTGCTCCTG
CTGCGGTGGCGTGA back to topCoding sequence (CDS) from alignment at An13:562120..564033- >CBS51388_008429-T1 ID=CBS51388_008429-T1|Name=CBS51388_008429-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1914bp|location=Sequence derived from alignment at An13:562120..564033- (Aspergillus niger CBS 513.88)
ATGAGTGAGCAAGAGAATCCTATCATCCTTCACTGCATTTATTGCAACCA
TGAACACCCTGAGCTCGATGGGGATGCTCTCTACGAGCACATTGAACAGA
ATCTCGATGACCTTAATAGACGTTTCAGGGAAAGAAGAGCCCTCAACGAG
GAGCATCATACGATCATCGACTGCCCAATGTGGCCTGGTTGCCGTCACAG
GCCTCTGACCTCTCTAGAGGGGGACGGCCATGCAATTAGCTGGACATACG
TGGAAATAGCATATGACACGATGGGGGACCATAAGGAATTTATTTCTTGC
GAATTATGCGGCACCCGTCATGTCATATTGACTGGACAATTCCTCGAAAT
TCACATCCGCGATTGCCATAGCTTAGTGTTCGAGATTCCCATGGTTGCGC
ACCCTTCGCCATCTGAACTAACTGAACTCCCACCGTCAACGATGTCTGGA
TCTGACCCCATGGAGCCCGAAGCAGCAGAGGAGTCTCAGGTGGACGTGTC
TGAAGCTGATGTAGTTGAAGCGGAGGATGCTAGGGCGCAGGGGTCCGCAG
AGGAGGCCGCCGCCGAAGCCGAGTACGACTCCGAAGAGGAAGAACCCGAA
GACCTACCTCATGACCTCGGACCATTCCGCACGAGTCTCGAGCAAGCACT
TTCGAATAACATCTTGACTGTCGAGAACTTCGCACAGGTTATATGCACCA
TATGCCGTGATCATAGAGTTCCCGTCAAACACCTTCCCCGGCTCAATTTC
TATAACGCTCTTCGAGCCAGGCTTGCTCCGCTTCTAGATCAATTGATGTA
CAATCCCAGGGTCCACAACAATAATCGAGTGACCGCCCAATATGCCACGC
GCAGAATCCAAGGGACCACCATTGGCGAAGCTATCCTTGAAAACAAAGTC
AGGCCGATCCAGGTTCTCTGTGATCTAGGGTTCCGCATCAACGATATTAT
GCACAGCAACCTGACCGTGCTGGGTGCGGCCATCCTACGCCAGCAAAGCA
AAATCGCCCAATACCTCCTGAACCCTGAATTCAAGGAAAAGTACGGCGTC
GACCCTTTCCGTCCCGTAACTCTGGACACTAGATTTGCAGACAGCACCAC
TCCGATTGCCCTATGCGTGAACAGATATGAGTACGGGGTCCTAAAAACCA
TCCTCAGCTACGAGACACCCCCGAACGTCATGCGAACCGAAGACGTAAAT
CAGCTCTTCCGATCGCAGCTATGGAACCGCCTTAGCCATATAGTCCACGA
CCAATACTTCAGGGACGCCATCTTCGCGGCACGCAACGCTCCCATCTCCC
CGATCCACTGCGCTGTTGTCAACCCTGACCTTTTCGTCCTGCGAAACCTC
GTCTGGGTCCGAGCAGATCACCCAAACATACTCCCCGATTTAGCCGATCA
CATCAACGCCGAGAACAACACCATAATCCAGAACGCAACCCCTCTCCTTC
TCGCCCTCCACCGCCAAAACGCAGAAGCTCTGACTATCCTCCTCAAAACT
CCCGGCATCGACCCCTCACGGCCAAACTCCCGCATGCTCACTCCCCTATA
TTACGCTGCCCGCATAGCTAATCTCGAACTAGCCCGCATCCTAATAGAGT
ACCGTGCTGATCCGAGAGTTGTCACAGCCATGGGCACGCCGCTTCATGCA
CTGGTGCATACGTATAGGGAAGCCAAGGAACGGCGCATGGCTGAGAACCC
CCAGGAGTGGGCATTCCTCAAAGAAAAGCTTGCACGGCTTCAGCTTCTTT
TCTTGGAGAGTGGCGTCGACCCAGATGCTAGGCCTGATGGGGCTGATGCC
ATGGGCAGGACGGCTGGCGAGGAGGCTGAGCTCGTGGAGTATTGGGAGTT
TTCGAATGTGCTTGTTGCGTTTAGAAATGCTGCTGCTGCTCCTGCTCCTG
CTGCGGTGGCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF12796 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An13 | supercontig | An13:562120..564033 - |
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