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Sequences
The following sequences are available for this feature:
mRNA from alignment at An13:606003..606727+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008445-T1 ID=CBS51388_008445-T1|Name=CBS51388_008445-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=725bp|location=Sequence derived from alignment at An13:606003..606727+ (Aspergillus niger CBS 513.88)
ATGCATCTAACGTCCCTTCTCCTCCTTATCCCCGCCGTCGCAGCTAGCTG
CTTCCACAACACCCCTCTCGCCCGGCGTGCAACCGCCCCCAGCTTCGGGT
ATACTGCCACGCGAGGCCCATTGAACTGGTATGGGCTCGACCCGAATGCC
AATGCCGCTTGCGCAACAGGGACACACCAGTCCCCAATCATGATCGGCAG
CACTCAGATCTCGAAAGTCGATAACAGCACCATCACCCTCTTTATCCCTA
CGGTTTCCGATCTCGAGTTCGAGAACCTCGGCACCACTATCGAAGTGCCC
TTGACGAATGGCACGCTCGTCGTGAGGAACAATACTTACACCCTGGCTCA
GTTCCACTTCCATACCCCTTCCGAGCACCGTATCGATGAGGAGCATTTCC
CCATGGAAGCCCATTTTGTGTTTTCGGATGAGGGTACAGCATGAACCATC
TTTCTGCGCTCACTTTTCTTGATTGCTGATTTAGAACTCTAAAAATAGAT
GGAAACATCGCCGTGGTGGGTTACCTCATCCAACTCACCTCCACAAAGGA
TCACAGCACACCCCTGCTGAACACCATATTCGAGGACGTCGATGAGATCT
CCGAGCCGGGAAGCTCCACCGAGCTCGGATTGCTGGACTTCAGCAGTGTC
ACGAGACATTTCACGAACAACGATATCTACACATACTCTGGGTCGTTGAC
TACCCGCCCTGCACCGAGGGTGTAG back to topCoding sequence (CDS) from alignment at An13:606003..606727+ >CBS51388_008445-T1 ID=CBS51388_008445-T1|Name=CBS51388_008445-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1320bp|location=Sequence derived from alignment at An13:606003..606727+ (Aspergillus niger CBS 513.88)
ATGCATCTAACGTCCCTTCTCCTCCTTATCCCCGCCGTCGCAGCTAGCTG
CTTCCACAACACCCCTCTCGCCCGGCGTGCAACCGCCCCCAGCTTCGGGT
ATACTGCCACGCGAGGCCCATTGAACTGGTATGGGCTCGACCCGAATGCC
AATGCCGCTTGCGCAACAGGGACACACCAGTCCCCAATCATGATCGGCAG
CACTCAGATCTCGAAAGTCGATAACAGCACCATCACCCTCTTTATCCCTA
CGGTTTCCGATCTCGAGTTCGAGAACCTCGGCACCACTATCGAAGTGCCC
TTGACGAATGGCACGCTCGTCGTGAGGAACAATACTTACACCCTGGCTCA
GTTCCACTTCCATACCCCTTCCGAGCACCGTATCGATGAGGAGCATTTCC
CCATGGAAGCCCATTTTGTGTTTTCGGATGAGGATGGAAACATCGCCGTG
GTGGGTTACCTCATCCAACTCACCTCCACAAAGGATCACAGCACACCCCT
GCTGAACACCATATTCGAGGACGTCGATGAGATCTCCGAGCCGGGAAGCT
CCACCGAGCTCGGATTGCTGGACTTCAGCAGTGTCACGAGACATTTCACG
AACAACGATATCTACACATACTCTGGGTCGTTGACTACCCGCCCTGCACC
GAGGGTGTAGATGCATCTAACGTCCCTTCTCCTCCTTATCCCCGCCGTCG
CAGCTAGCTGCTTCCACAACACCCCTCTCGCCCGGCGTGCAACCGCCCCC
AGCTTCGGGTATACTGCCACGCGAGGCCCATTGAACTGGTATGGGCTCGA
CCCGAATGCCAATGCCGCTTGCGCAACAGGGACACACCAGTCCCCAATCA
TGATCGGCAGCACTCAGATCTCGAAAGTCGATAACAGCACCATCACCCTC
TTTATCCCTACGGTTTCCGATCTCGAGTTCGAGAACCTCGGCACCACTAT
CGAAGTGCCCTTGACGAATGGCACGCTCGTCGTGAGGAACAATACTTACA
CCCTGGCTCAGTTCCACTTCCATACCCCTTCCGAGCACCGTATCGATGAG
GAGCATTTCCCCATGGAAGCCCATTTTGTGTTTTCGGATGAGGATGGAAA
CATCGCCGTGGTGGGTTACCTCATCCAACTCACCTCCACAAAGGATCACA
GCACACCCCTGCTGAACACCATATTCGAGGACGTCGATGAGATCTCCGAG
CCGGGAAGCTCCACCGAGCTCGGATTGCTGGACTTCAGCAGTGTCACGAG
ACATTTCACGAACAACGATATCTACACATACTCTGGGTCGTTGACTACCC
GCCCTGCACCGAGGGTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004089 | carbonate dehydratase activity |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_13.2 |
| Note | antiSMASH:Cluster_13.3 |
| Note | SECRETED:SignalP(1-15) |
| DBxref | InterPro:IPR041891 |
| DBxref | InterPro:IPR018338 |
| DBxref | InterPro:IPR036398 |
| DBxref | InterPro:IPR001148 |
| DBxref | PFAM:PF00194 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An13 | supercontig | An13:606003..606727 + |
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