You are here

Home

CBS51388_008449-T1, CBS51388_008449-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008449-T1
Unique NameCBS51388_008449-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An13:616225..617446-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008449-T1 ID=CBS51388_008449-T1|Name=CBS51388_008449-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1222bp|location=Sequence derived from alignment at An13:616225..617446- (Aspergillus niger CBS 513.88)
ATGGCTCCTGGAATCTCTGCAGATCTCCCAATCCACTCGCACCCCGCATC
CAGTGCGGATGGCCCGACTGACCAACCACGGTATCCCACTCCACTGAAGC
CCAGTGGTGCTTTGGATGAGTTTGCATTTGAAGAGACAACTCCAATCATT
GGCCGCGAGTACCCCACCGTCAACATTGTCGATGATCTCCTGAACGCTCC
CAACTCCGATGAGCTGCTGCGCGACCTTGCCATCACGAGTACCTCTCCCG
ATCTACCCCAACTATATCCCATCACCTAACCATGATCAACAGTATCTCAG
CGCGGTGTCGTCTTCTTCCGCGCCCAAACAAACCTCACCGATGACCTTCA
GAAAGAATTGGTCCACCGACTAGGGCAGCTAACTGGCAAACCCCCCACCT
CCACCCTACACATCCACCCGCTGCTGAACAACACCAACGAGTTCGGCACC
GCAGACGCCGAAATCAGCACAATCAGCTCTCTCGCGCGCAAGAAGATGTT
CGCCCACGATCGCCAACCCAACCGCCGTAGCTACGACTCGGCCCAATGGC
ACTCCGATATCCAGTTCGAGCCGGCACCAGCTGACTACACCTCTCTCCGG
CTAACCCAGCTTCCCAAAACCGGTGGAGACACCCTCTGGGCATCTGGGTA
CGAGCTCTACGACCGGTTCTCGAAGAAGTACCAAGAATTCTTCGAAGGAT
TGACAGCGACGTTCGTGGGTGATGGCTTCATCAAGGCGGCGGAGAGAAAT
CCGAAGGATTACAAGATATACACTCAGCCTCGAGGAAGTCCGCTCAATGT
TGGGGATGAGTTGGTGGCTGTTCATCCGGTTGTGCGGACGAACCCAGTGA
CGGGGTGGAAGAGTATCTTTGCTTTGGGGCCGTTCCCGAAGTATATCAAT
GAGTTGAACGAGATTGAGTCGGAGGAGTTGTTGAAGAAGTTCAAATCGAT
TATCATTGAGGGTCATGATCTGCAGGTCAGATTCAAATGGAGGAATGAGC
ATGATATTGGTATGTCGTTGGCATTTGTTGTGTTGCTTATTTTAGGACTA
ACACTTGATAGCCATCTGGGACAACCGGAGTGCTTTCCACACTGCCACTT
TCGATTATGAAGGCCTTGGTGAGAGATTCGGACACCGGGCGGTGGGTATT
GGCGAGAGACCTTACCTGGACCCGAACAGCAAGTCGAGGACCGAAGCACT
GGCAGCTGAGGGTCTTCTTTGA
back to top

Coding sequence (CDS) from alignment at An13:616225..617446-

>CBS51388_008449-T1 ID=CBS51388_008449-T1|Name=CBS51388_008449-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3348bp|location=Sequence derived from alignment at An13:616225..617446- (Aspergillus niger CBS 513.88)
CCATCTGGGACAACCGGAGTGCTTTCCACACTGCCACTTTCGATTATGAA
GGCCTTGGTGAGAGATTCGGACACCGGGCGGTGGGTATTGGCGAGAGACC
TTACCTGGACCCGAACAGCAAGTCGAGGACCGAAGCACTGGCAGCTGAGG
GTCTTCTTTGATATCTCAGCGCGGTGTCGTCTTCTTCCGCGCCCAAACAA
ACCTCACCGATGACCTTCAGAAAGAATTGGTCCACCGACTAGGGCAGCTA
ACTGGCAAACCCCCCACCTCCACCCTACACATCCACCCGCTGCTGAACAA
CACCAACGAGTTCGGCACCGCAGACGCCGAAATCAGCACAATCAGCTCTC
TCGCGCGCAAGAAGATGTTCGCCCACGATCGCCAACCCAACCGCCGTAGC
TACGACTCGGCCCAATGGCACTCCGATATCCAGTTCGAGCCGGCACCAGC
TGACTACACCTCTCTCCGGCTAACCCAGCTTCCCAAAACCGGTGGAGACA
CCCTCTGGGCATCTGGGTACGAGCTCTACGACCGGTTCTCGAAGAAGTAC
CAAGAATTCTTCGAAGGATTGACAGCGACGTTCGTGGGTGATGGCTTCAT
CAAGGCGGCGGAGAGAAATCCGAAGGATTACAAGATATACACTCAGCCTC
GAGGAAGTCCGCTCAATGTTGGGGATGAGTTGGTGGCTGTTCATCCGGTT
GTGCGGACGAACCCAGTGACGGGGTGGAAGAGTATCTTTGCTTTGGGGCC
GTTCCCGAAGTATATCAATGAGTTGAACGAGATTGAGTCGGAGGAGTTGT
TGAAGAAGTTCAAATCGATTATCATTGAGGGTCATGATCTGCAGGTCAGA
TTCAAATGGAGGAATGAGCATGATATTGATGGCTCCTGGAATCTCTGCAG
ATCTCCCAATCCACTCGCACCCCGCATCCAGTGCGGATGGCCCGACTGAC
CAACCACGGTATCCCACTCCACTGAAGCCCAGTGGTGCTTTGGATGAGTT
TGCATTTGAAGAGACAACTCCAATCATTGGCCGCGAGTACCCCACCGTCA
ACATTGTCGATGATCTCCTGAACGCTCCCAACTCCGATGAGCTGCTGCGC
GACCTTGCCATCACGACCATCTGGGACAACCGGAGTGCTTTCCACACTGC
CACTTTCGATTATGAAGGCCTTGGTGAGAGATTCGGACACCGGGCGGTGG
GTATTGGCGAGAGACCTTACCTGGACCCGAACAGCAAGTCGAGGACCGAA
GCACTGGCAGCTGAGGGTCTTCTTTGATATCTCAGCGCGGTGTCGTCTTC
TTCCGCGCCCAAACAAACCTCACCGATGACCTTCAGAAAGAATTGGTCCA
CCGACTAGGGCAGCTAACTGGCAAACCCCCCACCTCCACCCTACACATCC
ACCCGCTGCTGAACAACACCAACGAGTTCGGCACCGCAGACGCCGAAATC
AGCACAATCAGCTCTCTCGCGCGCAAGAAGATGTTCGCCCACGATCGCCA
ACCCAACCGCCGTAGCTACGACTCGGCCCAATGGCACTCCGATATCCAGT
TCGAGCCGGCACCAGCTGACTACACCTCTCTCCGGCTAACCCAGCTTCCC
AAAACCGGTGGAGACACCCTCTGGGCATCTGGGTACGAGCTCTACGACCG
GTTCTCGAAGAAGTACCAAGAATTCTTCGAAGGATTGACAGCGACGTTCG
TGGGTGATGGCTTCATCAAGGCGGCGGAGAGAAATCCGAAGGATTACAAG
ATATACACTCAGCCTCGAGGAAGTCCGCTCAATGTTGGGGATGAGTTGGT
GGCTGTTCATCCGGTTGTGCGGACGAACCCAGTGACGGGGTGGAAGAGTA
TCTTTGCTTTGGGGCCGTTCCCGAAGTATATCAATGAGTTGAACGAGATT
GAGTCGGAGGAGTTGTTGAAGAAGTTCAAATCGATTATCATTGAGGGTCA
TGATCTGCAGGTCAGATTCAAATGGAGGAATGAGCATGATATTGATGGCT
CCTGGAATCTCTGCAGATCTCCCAATCCACTCGCACCCCGCATCCAGTGC
GGATGGCCCGACTGACCAACCACGGTATCCCACTCCACTGAAGCCCAGTG
GTGCTTTGGATGAGTTTGCATTTGAAGAGACAACTCCAATCATTGGCCGC
GAGTACCCCACCGTCAACATTGTCGATGATCTCCTGAACGCTCCCAACTC
CGATGAGCTGCTGCGCGACCTTGCCATCACGACCATCTGGGACAACCGGA
GTGCTTTCCACACTGCCACTTTCGATTATGAAGGCCTTGGTGAGAGATTC
GGACACCGGGCGGTGGGTATTGGCGAGAGACCTTACCTGGACCCGAACAG
CAAGTCGAGGACCGAAGCACTGGCAGCTGAGGGTCTTCTTTGATATCTCA
GCGCGGTGTCGTCTTCTTCCGCGCCCAAACAAACCTCACCGATGACCTTC
AGAAAGAATTGGTCCACCGACTAGGGCAGCTAACTGGCAAACCCCCCACC
TCCACCCTACACATCCACCCGCTGCTGAACAACACCAACGAGTTCGGCAC
CGCAGACGCCGAAATCAGCACAATCAGCTCTCTCGCGCGCAAGAAGATGT
TCGCCCACGATCGCCAACCCAACCGCCGTAGCTACGACTCGGCCCAATGG
CACTCCGATATCCAGTTCGAGCCGGCACCAGCTGACTACACCTCTCTCCG
GCTAACCCAGCTTCCCAAAACCGGTGGAGACACCCTCTGGGCATCTGGGT
ACGAGCTCTACGACCGGTTCTCGAAGAAGTACCAAGAATTCTTCGAAGGA
TTGACAGCGACGTTCGTGGGTGATGGCTTCATCAAGGCGGCGGAGAGAAA
TCCGAAGGATTACAAGATATACACTCAGCCTCGAGGAAGTCCGCTCAATG
TTGGGGATGAGTTGGTGGCTGTTCATCCGGTTGTGCGGACGAACCCAGTG
ACGGGGTGGAAGAGTATCTTTGCTTTGGGGCCGTTCCCGAAGTATATCAA
TGAGTTGAACGAGATTGAGTCGGAGGAGTTGTTGAAGAAGTTCAAATCGA
TTATCATTGAGGGTCATGATCTGCAGGTCAGATTCAAATGGAGGAATGAG
CATGATATTGATGGCTCCTGGAATCTCTGCAGATCTCCCAATCCACTCGC
ACCCCGCATCCAGTGCGGATGGCCCGACTGACCAACCACGGTATCCCACT
CCACTGAAGCCCAGTGGTGCTTTGGATGAGTTTGCATTTGAAGAGACAAC
TCCAATCATTGGCCGCGAGTACCCCACCGTCAACATTGTCGATGATCTCC
TGAACGCTCCCAACTCCGATGAGCTGCTGCGCGACCTTGCCATCACGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008449CBS51388_008449Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008449-T1CBS51388_008449-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008449-T1.cdsCBS51388_008449-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008449-T1.exon3CBS51388_008449-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_008449-T1.exon2CBS51388_008449-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008449-T1.exon1CBS51388_008449-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR003819
DBxrefInterPro:IPR042098
DBxrefPFAM:PF02668
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An13supercontigAn13:616225..617446 -
Powered by Drupal