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Sequences
The following sequences are available for this feature:
mRNA from alignment at An13:693562..695848+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008473-T1 ID=CBS51388_008473-T1|Name=CBS51388_008473-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2287bp|location=Sequence derived from alignment at An13:693562..695848+ (Aspergillus niger CBS 513.88)
ATGGTCTACTGCGGTCGCCCTTCCACAAGTTGCAATAATTGTCGCGCCAA
AAAGAGAAGAGTAAGTCATTCCTGTTTTGCGCCCCTTTACAAATCACCGA
AAATCATTTGGATTGGAGCAGTGTAAACAAGACATTTTGGCCCATGTCTA
ACCTCCCAAACAACAACAGTGCGACAAAGCAGTCCCCGAATGCGGCCAAT
GTTGGCGCACGGGTCAGAAATGCCCGGGATACAGAGATCCCTCCAGCCTC
ATCTTTCGCGATGAGAGCACTCAAGTCATCAACCGCGCCCGCTCAAAAGT
CTCCAAGAGGACGTCGGCGACCACTCCAACCGACCGCCGCTCGGTGGAAC
GCACAGCTTCACCACAGGCACAGATACAACTACAACACCAACTAGAACAA
CAACAACAACAGCAACAGCAACAGCAACAACAGCAACAACAAAACACTTC
CGCACCAGACTATCCGACCAGCCGCCCTTCCGATGTTGTCGACGAGACCA
TGCTGGACATGACCGACGTCGATGTTGGAGCCGGGATTTTCGCCGGCGCC
AGCTTCATGCCCGACTTAATGAGCTTCCCCGACCCTTTCAACCCGGATGA
GACGGGGCTCTTCTCCCTCCATCCGGATGTCTCGCCCAGCGCCATGCCGG
TATCGGGTGACGGTCCTGCATCCGCTGCTTCTGTTCCTGCCTCCGTGTCT
GGGCGCCGTTCGCGTATCGGTGCTTCGAGCGTAGGCGGCGATGATGTGGC
TCTCGATCATTTTCCTGATGACGGCACCCACCGCGGCGACCGCCAACAGC
TCGGACACAACGACTTCACCAGCAGTCAGCTCGAGGTCATCGCGCGTCCC
ATCTCCTTGCCTCTCGTCGTCATCGGTCTCGATTTCTTCTTCTCTCACTA
TGTCGTTCCGCAGTCCGGCCCCTCCTCCGGCTTTTTGGACTACGCGCCGG
CCATGCTAGCGCAAGACGACGGCGGAAATGACATGCTTGAGGGTGCCATT
CTGGCGCTCGGCTTCAGTGGGCTCGCTCGCACCACGAACCAGACCGACCT
GTTGACCCGGTCCATGATGATGTACACCCGCACCATGGAGCGCGTCAATC
TCGCCCTCGCCGACCCCCAGGCCGCCCGTCGCGACAGCACCATTGTCTCG
GTCCTCGTCCTCGCCCTCTACGAGTTCAGCAGGGCCTCTCTCGACGGCTG
GAAGCACCACATTGAGGGGGCTACTTCGCTCCTCAACCTGCGCGGCCGCT
CCCAGTTCTCCACCCCGACCGGCCTGCAGATCTTCAAGGATGTCTTCTCC
CAACTCCTCACCAACTGCATGCGCTCCGGCTCTCCCATGCCCTCGAGCCT
ACGCATGCTGCGCATCGAGGCCACCAACGCCCTCAGCATCTCGGATCCCT
ACTGGGTCGCCTGCAGCGGCAKGGTCGAGCTTCTCGATCTCTATCAGCAC
ATTTCCCCGGGCGGCTACTCGTTCTTTCCCAACTCTTCCGGCATCTCCTC
CTCTTCCTCCTCCACCTCCTCCGCTCCCGCCGCCCCTTCCGATTCCTCCA
ACTCCCCCTCTGCTGTTTCCGGTTCGTCCCCGGCCTCTACCTCCTCCATG
GCCTCCGGTCCTCTCAAGGGTGCCAGCATGTCCATTGAGTACCTCGAGCG
CTACCTCTCGCAGGCGCTCGAGATTGACTACCGCCTCGAAAGCACCTTCT
CCAACTGCCCTACCGAGTGGCAGTTCACCACCCAATCCAACTCGTCTAGC
AACACCTACGATCCGACTCGTATCCAGCGCGACGTCCACCACATCTACCA
CGATGTCTGGATCGCCGACGTCTGGAACAGCATGCGCACCTGCCGCATCC
TGGCCAACCACGCCATCAGCCACCTTCTCCTCCGCGGCGCCAACACCGAC
AGCAATTGGTTCTTCGCCAACAACTATGCCGAACGCCTGCACCAGGCCAC
CCAAACCATCGTCCGCATGCGCGACGAGATGCTCGCCTCCGTGCCCCAGC
TCATGGGCTACGCCACCTCGCCGACACAGGAGCTGCAGCTGCAGCAACAG
CAGCAGCAGAAGCAGCCGCCCGAGCGCGCCAAGAACATCGCCGGCTCGGC
CGTCGGCGGCTACTTTGCCTGCTGGGTTCTCCTCACCGTGGGCTGCATGC
ACAACCTCGGCCACGAGACCCGTGCGTACACGGCCGCCCAATTGCGCCGA
ATCAGCTGCGAAGCAGGGCTTGCGCAGGCAGAGGATTTCGCCAACTTTGT
TCAATCAAGCAACCTCCGTCCACCATTAAGTGGATAG back to topCoding sequence (CDS) from alignment at An13:693562..695848+ >CBS51388_008473-T1 ID=CBS51388_008473-T1|Name=CBS51388_008473-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6462bp|location=Sequence derived from alignment at An13:693562..695848+ (Aspergillus niger CBS 513.88)
ATGGTCTACTGCGGTCGCCCTTCCACAAGTTGCAATAATTGTCGCGCCAA
AAAGAGAAGATGCGACAAAGCAGTCCCCGAATGCGGCCAATGTTGGCGCA
CGGGTCAGAAATGCCCGGGATACAGAGATCCCTCCAGCCTCATCTTTCGC
GATGAGAGCACTCAAGTCATCAACCGCGCCCGCTCAAAAGTCTCCAAGAG
GACGTCGGCGACCACTCCAACCGACCGCCGCTCGGTGGAACGCACAGCTT
CACCACAGGCACAGATACAACTACAACACCAACTAGAACAACAACAACAA
CAGCAACAGCAACAGCAACAACAGCAACAACAAAACACTTCCGCACCAGA
CTATCCGACCAGCCGCCCTTCCGATGTTGTCGACGAGACCATGCTGGACA
TGACCGACGTCGATGTTGGAGCCGGGATTTTCGCCGGCGCCAGCTTCATG
CCCGACTTAATGAGCTTCCCCGACCCTTTCAACCCGGATGAGACGGGGCT
CTTCTCCCTCCATCCGGATGTCTCGCCCAGCGCCATGCCGGTATCGGGTG
ACGGTCCTGCATCCGCTGCTTCTGTTCCTGCCTCCGTGTCTGGGCGCCGT
TCGCGTATCGGTGCTTCGAGCGTAGGCGGCGATGATGTGGCTCTCGATCA
TTTTCCTGATGACGGCACCCACCGCGGCGACCGCCAACAGCTCGGACACA
ACGACTTCACCAGCAGTCAGCTCGAGGTCATCGCGCGTCCCATCTCCTTG
CCTCTCGTCGTCATCGGTCTCGATTTCTTCTTCTCTCACTATGTCGTTCC
GCAGTCCGGCCCCTCCTCCGGCTTTTTGGACTACGCGCCGGCCATGCTAG
CGCAAGACGACGGCGGAAATGACATGCTTGAGGGTGCCATTCTGGCGCTC
GGCTTCAGTGGGCTCGCTCGCACCACGAACCAGACCGACCTGTTGACCCG
GTCCATGATGATGTACACCCGCACCATGGAGCGCGTCAATCTCGCCCTCG
CCGACCCCCAGGCCGCCCGTCGCGACAGCACCATTGTCTCGGTCCTCGTC
CTCGCCCTCTACGAGTTCAGCAGGGCCTCTCTCGACGGCTGGAAGCACCA
CATTGAGGGGGCTACTTCGCTCCTCAACCTGCGCGGCCGCTCCCAGTTCT
CCACCCCGACCGGCCTGCAGATCTTCAAGGATGTCTTCTCCCAACTCCTC
ACCAACTGCATGCGCTCCGGCTCTCCCATGCCCTCGAGCCTACGCATGCT
GCGCATCGAGGCCACCAACGCCCTCAGCATCTCGGATCCCTACTGGCTTC
TCGATCTCTATCAGCACATTTCCCCGGGCGGCTACTCGTTCTTTCCCAAC
TCTTCCGGCATCTCCTCCTCTTCCTCCTCCACCTCCTCCGCTCCCGCCGC
CCCTTCCGATTCCTCCAACTCCCCCTCTGCTGTTTCCGGTTCGTCCCCGG
CCTCTACCTCCTCCATGGCCTCCGGTCCTCTCAAGGGTGCCAGCATGTCC
ATTGAGTACCTCGAGCGCTACCTCTCGCAGGCGCTCGAGATTGACTACCG
CCTCGAAAGCACCTTCTCCAACTGCCCTACCGAGTGGCAGTTCACCACCC
AATCCAACTCGTCTAGCAACACCTACGATCCGACTCGTATCCAGCGCGAC
GTCCACCACATCTACCACGATGTCTGGATCGCCGACGTCTGGAACAGCAT
GCGCACCTGCCGCATCCTGGCCAACCACGCCATCAGCCACCTTCTCCTCC
GCGGCGCCAACACCGACAGCAATTGGTTCTTCGCCAACAACTATGCCGAA
CGCCTGCACCAGGCCACCCAAACCATCGTCCGCATGCGCGACGAGATGCT
CGCCTCCGTGCCCCAGCTCATGGGCTACGCCACCTCGCCGACACAGGAGC
TGCAGCTGCAGCAACAGCAGCAGCAGAAGCAGCCGCCCGAGCGCGCCAAG
AACATCGCCGGCTCGGCCGTCGGCGGCTACTTTGCCTGCTGGGTTCTCCT
CACCGTGGGCTGCATGCACAACCTCGGCCACGAGACCCGTGCGTACACGG
CCGCCCAATTGCGCCGAATCAGCTGCGAAGCAGGGCTTGCGCAGGCAGAG
GATTTCGCCAACTTTGTTCAATCAAGCAACCTCCGTCCACCATTAAGTGG
ATAGATGGTCTACTGCGGTCGCCCTTCCACAAGTTGCAATAATTGTCGCG
CCAAAAAGAGAAGATGCGACAAAGCAGTCCCCGAATGCGGCCAATGTTGG
CGCACGGGTCAGAAATGCCCGGGATACAGAGATCCCTCCAGCCTCATCTT
TCGCGATGAGAGCACTCAAGTCATCAACCGCGCCCGCTCAAAAGTCTCCA
AGAGGACGTCGGCGACCACTCCAACCGACCGCCGCTCGGTGGAACGCACA
GCTTCACCACAGGCACAGATACAACTACAACACCAACTAGAACAACAACA
ACAACAGCAACAGCAACAGCAACAACAGCAACAACAAAACACTTCCGCAC
CAGACTATCCGACCAGCCGCCCTTCCGATGTTGTCGACGAGACCATGCTG
GACATGACCGACGTCGATGTTGGAGCCGGGATTTTCGCCGGCGCCAGCTT
CATGCCCGACTTAATGAGCTTCCCCGACCCTTTCAACCCGGATGAGACGG
GGCTCTTCTCCCTCCATCCGGATGTCTCGCCCAGCGCCATGCCGGTATCG
GGTGACGGTCCTGCATCCGCTGCTTCTGTTCCTGCCTCCGTGTCTGGGCG
CCGTTCGCGTATCGGTGCTTCGAGCGTAGGCGGCGATGATGTGGCTCTCG
ATCATTTTCCTGATGACGGCACCCACCGCGGCGACCGCCAACAGCTCGGA
CACAACGACTTCACCAGCAGTCAGCTCGAGGTCATCGCGCGTCCCATCTC
CTTGCCTCTCGTCGTCATCGGTCTCGATTTCTTCTTCTCTCACTATGTCG
TTCCGCAGTCCGGCCCCTCCTCCGGCTTTTTGGACTACGCGCCGGCCATG
CTAGCGCAAGACGACGGCGGAAATGACATGCTTGAGGGTGCCATTCTGGC
GCTCGGCTTCAGTGGGCTCGCTCGCACCACGAACCAGACCGACCTGTTGA
CCCGGTCCATGATGATGTACACCCGCACCATGGAGCGCGTCAATCTCGCC
CTCGCCGACCCCCAGGCCGCCCGTCGCGACAGCACCATTGTCTCGGTCCT
CGTCCTCGCCCTCTACGAGTTCAGCAGGGCCTCTCTCGACGGCTGGAAGC
ACCACATTGAGGGGGCTACTTCGCTCCTCAACCTGCGCGGCCGCTCCCAG
TTCTCCACCCCGACCGGCCTGCAGATCTTCAAGGATGTCTTCTCCCAACT
CCTCACCAACTGCATGCGCTCCGGCTCTCCCATGCCCTCGAGCCTACGCA
TGCTGCGCATCGAGGCCACCAACGCCCTCAGCATCTCGGATCCCTACTGG
CTTCTCGATCTCTATCAGCACATTTCCCCGGGCGGCTACTCGTTCTTTCC
CAACTCTTCCGGCATCTCCTCCTCTTCCTCCTCCACCTCCTCCGCTCCCG
CCGCCCCTTCCGATTCCTCCAACTCCCCCTCTGCTGTTTCCGGTTCGTCC
CCGGCCTCTACCTCCTCCATGGCCTCCGGTCCTCTCAAGGGTGCCAGCAT
GTCCATTGAGTACCTCGAGCGCTACCTCTCGCAGGCGCTCGAGATTGACT
ACCGCCTCGAAAGCACCTTCTCCAACTGCCCTACCGAGTGGCAGTTCACC
ACCCAATCCAACTCGTCTAGCAACACCTACGATCCGACTCGTATCCAGCG
CGACGTCCACCACATCTACCACGATGTCTGGATCGCCGACGTCTGGAACA
GCATGCGCACCTGCCGCATCCTGGCCAACCACGCCATCAGCCACCTTCTC
CTCCGCGGCGCCAACACCGACAGCAATTGGTTCTTCGCCAACAACTATGC
CGAACGCCTGCACCAGGCCACCCAAACCATCGTCCGCATGCGCGACGAGA
TGCTCGCCTCCGTGCCCCAGCTCATGGGCTACGCCACCTCGCCGACACAG
GAGCTGCAGCTGCAGCAACAGCAGCAGCAGAAGCAGCCGCCCGAGCGCGC
CAAGAACATCGCCGGCTCGGCCGTCGGCGGCTACTTTGCCTGCTGGGTTC
TCCTCACCGTGGGCTGCATGCACAACCTCGGCCACGAGACCCGTGCGTAC
ACGGCCGCCCAATTGCGCCGAATCAGCTGCGAAGCAGGGCTTGCGCAGGC
AGAGGATTTCGCCAACTTTGTTCAATCAAGCAACCTCCGTCCACCATTAA
GTGGATAGATGGTCTACTGCGGTCGCCCTTCCACAAGTTGCAATAATTGT
CGCGCCAAAAAGAGAAGATGCGACAAAGCAGTCCCCGAATGCGGCCAATG
TTGGCGCACGGGTCAGAAATGCCCGGGATACAGAGATCCCTCCAGCCTCA
TCTTTCGCGATGAGAGCACTCAAGTCATCAACCGCGCCCGCTCAAAAGTC
TCCAAGAGGACGTCGGCGACCACTCCAACCGACCGCCGCTCGGTGGAACG
CACAGCTTCACCACAGGCACAGATACAACTACAACACCAACTAGAACAAC
AACAACAACAGCAACAGCAACAGCAACAACAGCAACAACAAAACACTTCC
GCACCAGACTATCCGACCAGCCGCCCTTCCGATGTTGTCGACGAGACCAT
GCTGGACATGACCGACGTCGATGTTGGAGCCGGGATTTTCGCCGGCGCCA
GCTTCATGCCCGACTTAATGAGCTTCCCCGACCCTTTCAACCCGGATGAG
ACGGGGCTCTTCTCCCTCCATCCGGATGTCTCGCCCAGCGCCATGCCGGT
ATCGGGTGACGGTCCTGCATCCGCTGCTTCTGTTCCTGCCTCCGTGTCTG
GGCGCCGTTCGCGTATCGGTGCTTCGAGCGTAGGCGGCGATGATGTGGCT
CTCGATCATTTTCCTGATGACGGCACCCACCGCGGCGACCGCCAACAGCT
CGGACACAACGACTTCACCAGCAGTCAGCTCGAGGTCATCGCGCGTCCCA
TCTCCTTGCCTCTCGTCGTCATCGGTCTCGATTTCTTCTTCTCTCACTAT
GTCGTTCCGCAGTCCGGCCCCTCCTCCGGCTTTTTGGACTACGCGCCGGC
CATGCTAGCGCAAGACGACGGCGGAAATGACATGCTTGAGGGTGCCATTC
TGGCGCTCGGCTTCAGTGGGCTCGCTCGCACCACGAACCAGACCGACCTG
TTGACCCGGTCCATGATGATGTACACCCGCACCATGGAGCGCGTCAATCT
CGCCCTCGCCGACCCCCAGGCCGCCCGTCGCGACAGCACCATTGTCTCGG
TCCTCGTCCTCGCCCTCTACGAGTTCAGCAGGGCCTCTCTCGACGGCTGG
AAGCACCACATTGAGGGGGCTACTTCGCTCCTCAACCTGCGCGGCCGCTC
CCAGTTCTCCACCCCGACCGGCCTGCAGATCTTCAAGGATGTCTTCTCCC
AACTCCTCACCAACTGCATGCGCTCCGGCTCTCCCATGCCCTCGAGCCTA
CGCATGCTGCGCATCGAGGCCACCAACGCCCTCAGCATCTCGGATCCCTA
CTGGCTTCTCGATCTCTATCAGCACATTTCCCCGGGCGGCTACTCGTTCT
TTCCCAACTCTTCCGGCATCTCCTCCTCTTCCTCCTCCACCTCCTCCGCT
CCCGCCGCCCCTTCCGATTCCTCCAACTCCCCCTCTGCTGTTTCCGGTTC
GTCCCCGGCCTCTACCTCCTCCATGGCCTCCGGTCCTCTCAAGGGTGCCA
GCATGTCCATTGAGTACCTCGAGCGCTACCTCTCGCAGGCGCTCGAGATT
GACTACCGCCTCGAAAGCACCTTCTCCAACTGCCCTACCGAGTGGCAGTT
CACCACCCAATCCAACTCGTCTAGCAACACCTACGATCCGACTCGTATCC
AGCGCGACGTCCACCACATCTACCACGATGTCTGGATCGCCGACGTCTGG
AACAGCATGCGCACCTGCCGCATCCTGGCCAACCACGCCATCAGCCACCT
TCTCCTCCGCGGCGCCAACACCGACAGCAATTGGTTCTTCGCCAACAACT
ATGCCGAACGCCTGCACCAGGCCACCCAAACCATCGTCCGCATGCGCGAC
GAGATGCTCGCCTCCGTGCCCCAGCTCATGGGCTACGCCACCTCGCCGAC
ACAGGAGCTGCAGCTGCAGCAACAGCAGCAGCAGAAGCAGCCGCCCGAGC
GCGCCAAGAACATCGCCGGCTCGGCCGTCGGCGGCTACTTTGCCTGCTGG
GTTCTCCTCACCGTGGGCTGCATGCACAACCTCGGCCACGAGACCCGTGC
GTACACGGCCGCCCAATTGCGCCGAATCAGCTGCGAAGCAGGGCTTGCGC
AGGCAGAGGATTTCGCCAACTTTGTTCAATCAAGCAACCTCCGTCCACCA
TTAAGTGGATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_13.4 |
| Note | antiSMASH:Cluster_13.5 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An13 | supercontig | An13:693562..695848 + |
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