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CBS51388_008479-T1, CBS51388_008479-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008479-T1
Unique NameCBS51388_008479-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An13:716256..717852-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008479-T1 ID=CBS51388_008479-T1|Name=CBS51388_008479-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1597bp|location=Sequence derived from alignment at An13:716256..717852- (Aspergillus niger CBS 513.88)
ATGGCGGAAGGAGTCATCACCGATCATGACGCCATGGGCGAAAAGGCTGA
GATCTCTCATGAGGAGGTCGTCCATTTGGCGCAGTTGACGCCGGAGGAAA
AGATTCTGGAGAGGCAATTGCGGCGGCGGATTGACACCCTCATCATGCCG
TTGGTAATCCTTGTTTATCTGATGAATTACATCGACCGGTACGTCTCACA
GATTCCTGGCATCGGATTGTTTTGAGTTGCGATGTGCTGACGTCTTTCTT
GATAGGAATAATTACGCCGCTGCAAAGCTTCAAGGATTAGAACAGGACCT
CTCCCTCGATGAAGCCAAGTACGAGACAGGGCTGTCCATTCTATTTGTGG
GCTATATCCTGATGCAGGTCCCATCGAACCTGCTCCTCAACTACATGGGC
CGTCCTTCACTATACCTTGGCTTCTTCACCACAGCGTGGGGCCTTGTCTC
GGCCTTGACCAGCCAGGTCTCAAGCTACGGTGGCATCGTGGCGTGTCGGT
TTATTCTCGGCTTGGTCGAGGCACCATTCTTTGCAGGTGTTCTATTTTAC
CTCTCCAAATGGTACACCAAGAAAGAGTTGGCCCTCCGCATGAGTATCTT
CTACTCTGGCTCATTGCTCAGCGGTGCCTTTGGAAACCTGATCGCTGCGG
GCATCCTTAATGGTCTTGCCGGAAAGAGAGGCATGTCGGCCTGGCAATGG
TTATACATCATCGAGGGTACCATCACTGTCGCAATCGGTCTAGCCATCTG
CGCTGTGCTGCCCGACTTTCCCGATACCTGGAAACTGTTGTCGCCGGAGA
TGAAGCATGTCGCCAATCGTCGCTTGGCCATTGAGGCAGCCGAAGCGGAT
GTCGATGACGGCGACAAGATGACCCAAATCAAGGGTCTGAAGCTGGCCTT
CACGGACGTCAAGACTTACGCCCTGGCTATTGCATACATGTCTCTCACGG
CCGCAAGTGGCTTCCAGAACTTCTTTCCAACTCTGACAGAGACCCTGGGG
TACAACCATATCATCTCTCTGCTCTTGGTAGCGCCGCCATACATATTCAT
GGTGGTATACAGTCTCTTCCACTCCTATCTCTCTGATCGTTTCGCCCATC
GATTCTGGTTCTTTGTCGGCCCCATCCCCATCACCATCGTGGGGTTTATT
ATCTTCATGACCACCCACTCCTTCGGACCTCGGTATTTCTCATTTTTCCT
CATGGTCTTTGTCTTTGCTCAGAACGGCACGATATACTCGTGGATCGCGA
ATGCGATTCCACGGCCTCCTGCCAAACGAGCTGCTGCGTATGCCTTTATC
AACTCGCTGGGAAACTCGGCCAGTATCTGGACTCCGTATACCTATCTGGA
ACGAGAGGCACCGTATTACTATACAGCTTTGGGAGTGTGCATTGGCATGC
AAGTTCTTGGCACTATAATGGCGACATTCCTGTACTTCCATCTGCGGTCG
CAAAACAAGCGACTGGCACGCCTGGAGGATGAGGACGCAGTTTTGACTGA
TAAGGAGCTTCGTCGGCTACAGAAGACGGCGGAGGTAGAGGGCATCGACA
TCGCTGCCGCCCGCCAGCTCCAGAAGGGGTTCCGATATGTCACCTAA
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Coding sequence (CDS) from alignment at An13:716256..717852-

>CBS51388_008479-T1 ID=CBS51388_008479-T1|Name=CBS51388_008479-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3060bp|location=Sequence derived from alignment at An13:716256..717852- (Aspergillus niger CBS 513.88)
GAATAATTACGCCGCTGCAAAGCTTCAAGGATTAGAACAGGACCTCTCCC
TCGATGAAGCCAAGTACGAGACAGGGCTGTCCATTCTATTTGTGGGCTAT
ATCCTGATGCAGGTCCCATCGAACCTGCTCCTCAACTACATGGGCCGTCC
TTCACTATACCTTGGCTTCTTCACCACAGCGTGGGGCCTTGTCTCGGCCT
TGACCAGCCAGGTCTCAAGCTACGGTGGCATCGTGGCGTGTCGGTTTATT
CTCGGCTTGGTCGAGGCACCATTCTTTGCAGGTGTTCTATTTTACCTCTC
CAAATGGTACACCAAGAAAGAGTTGGCCCTCCGCATGAGTATCTTCTACT
CTGGCTCATTGCTCAGCGGTGCCTTTGGAAACCTGATCGCTGCGGGCATC
CTTAATGGTCTTGCCGGAAAGAGAGGCATGTCGGCCTGGCAATGGTTATA
CATCATCGAGGGTACCATCACTGTCGCAATCGGTCTAGCCATCTGCGCTG
TGCTGCCCGACTTTCCCGATACCTGGAAACTGTTGTCGCCGGAGATGAAG
CATGTCGCCAATCGTCGCTTGGCCATTGAGGCAGCCGAAGCGGATGTCGA
TGACGGCGACAAGATGACCCAAATCAAGGGTCTGAAGCTGGCCTTCACGG
ACGTCAAGACTTACGCCCTGGCTATTGCATACATGTCTCTCACGGCCGCA
AGTGGCTTCCAGAACTTCTTTCCAACTCTGACAGAGACCCTGGGGTACAA
CCATATCATCTCTCTGCTCTTGGTAGCGCCGCCATACATATTCATGGTGG
TATACAGTCTCTTCCACTCCTATCTCTCTGATCGTTTCGCCCATCGATTC
TGGTTCTTTGTCGGCCCCATCCCCATCACCATCGTGGGGTTTATTATCTT
CATGACCACCCACTCCTTCGGACCTCGGTATTTCTCATTTTTCCTCATGG
TCTTTGTCTTTGCTCAGAACGGCACGATATACTCGTGGATCGCGAATGCG
ATTCCACGGCCTCCTGCCAAACGAGCTGCTGCGTATGCCTTTATCAACTC
GCTGGGAAACTCGGCCAGTATCTGGACTCCGTATACCTATCTGGAACGAG
AGGCACCGTATTACTATACAGCTTTGGGAGTGTGCATTGGCATGCAAGTT
CTTGGCACTATAATGGCGACATTCCTGTACTTCCATCTGCGGTCGCAAAA
CAAGCGACTGGCACGCCTGGAGGATGAGGACGCAGTTTTGACTGATAAGG
AGCTTCGTCGGCTACAGAAGACGGCGGAGGTAGAGGGCATCGACATCGCT
GCCGCCCGCCAGCTCCAGAAGGGGTTCCGATATGTCACCTAAATGGCGGA
AGGAGTCATCACCGATCATGACGCCATGGGCGAAAAGGCTGAGATCTCTC
ATGAGGAGGTCGTCCATTTGGCGCAGTTGACGCCGGAGGAAAAGATTCTG
GAGAGGCAATTGCGGCGGCGGATTGACACCCTCATCATGCCGTTGGTAAT
CCTTGTTTATCTGATGAATTACATCGACCGGAATAATTACGCCGCTGCAA
AGCTTCAAGGATTAGAACAGGACCTCTCCCTCGATGAAGCCAAGTACGAG
ACAGGGCTGTCCATTCTATTTGTGGGCTATATCCTGATGCAGGTCCCATC
GAACCTGCTCCTCAACTACATGGGCCGTCCTTCACTATACCTTGGCTTCT
TCACCACAGCGTGGGGCCTTGTCTCGGCCTTGACCAGCCAGGTCTCAAGC
TACGGTGGCATCGTGGCGTGTCGGTTTATTCTCGGCTTGGTCGAGGCACC
ATTCTTTGCAGGTGTTCTATTTTACCTCTCCAAATGGTACACCAAGAAAG
AGTTGGCCCTCCGCATGAGTATCTTCTACTCTGGCTCATTGCTCAGCGGT
GCCTTTGGAAACCTGATCGCTGCGGGCATCCTTAATGGTCTTGCCGGAAA
GAGAGGCATGTCGGCCTGGCAATGGTTATACATCATCGAGGGTACCATCA
CTGTCGCAATCGGTCTAGCCATCTGCGCTGTGCTGCCCGACTTTCCCGAT
ACCTGGAAACTGTTGTCGCCGGAGATGAAGCATGTCGCCAATCGTCGCTT
GGCCATTGAGGCAGCCGAAGCGGATGTCGATGACGGCGACAAGATGACCC
AAATCAAGGGTCTGAAGCTGGCCTTCACGGACGTCAAGACTTACGCCCTG
GCTATTGCATACATGTCTCTCACGGCCGCAAGTGGCTTCCAGAACTTCTT
TCCAACTCTGACAGAGACCCTGGGGTACAACCATATCATCTCTCTGCTCT
TGGTAGCGCCGCCATACATATTCATGGTGGTATACAGTCTCTTCCACTCC
TATCTCTCTGATCGTTTCGCCCATCGATTCTGGTTCTTTGTCGGCCCCAT
CCCCATCACCATCGTGGGGTTTATTATCTTCATGACCACCCACTCCTTCG
GACCTCGGTATTTCTCATTTTTCCTCATGGTCTTTGTCTTTGCTCAGAAC
GGCACGATATACTCGTGGATCGCGAATGCGATTCCACGGCCTCCTGCCAA
ACGAGCTGCTGCGTATGCCTTTATCAACTCGCTGGGAAACTCGGCCAGTA
TCTGGACTCCGTATACCTATCTGGAACGAGAGGCACCGTATTACTATACA
GCTTTGGGAGTGTGCATTGGCATGCAAGTTCTTGGCACTATAATGGCGAC
ATTCCTGTACTTCCATCTGCGGTCGCAAAACAAGCGACTGGCACGCCTGG
AGGATGAGGACGCAGTTTTGACTGATAAGGAGCTTCGTCGGCTACAGAAG
ACGGCGGAGGTAGAGGGCATCGACATCGCTGCCGCCCGCCAGCTCCAGAA
GGGGTTCCGATATGTCACCTAAATGGCGGAAGGAGTCATCACCGATCATG
ACGCCATGGGCGAAAAGGCTGAGATCTCTCATGAGGAGGTCGTCCATTTG
GCGCAGTTGACGCCGGAGGAAAAGATTCTGGAGAGGCAATTGCGGCGGCG
GATTGACACCCTCATCATGCCGTTGGTAATCCTTGTTTATCTGATGAATT
ACATCGACCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008479CBS51388_008479Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008479-T1CBS51388_008479-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008479-T1.cdsCBS51388_008479-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008479-T1.exon2CBS51388_008479-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008479-T1.exon1CBS51388_008479-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteantiSMASH:Cluster_13.5
NoteSMCOG1106:major facilitator transporter
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An13supercontigAn13:716256..717852 -
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