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CBS51388_008509-T1, CBS51388_008509-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008509-T1
Unique NameCBS51388_008509-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An13:801118..802529+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008509-T1 ID=CBS51388_008509-T1|Name=CBS51388_008509-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1412bp|location=Sequence derived from alignment at An13:801118..802529+ (Aspergillus niger CBS 513.88)
ATGGGCATTCTAGGAATAATACCTGAAGCCATGATTGCAGTGAATTCATT
GCTCCAACTGACCAAAGTAAGTAATGAACTAGCTTATAGCAGCTGACCAA
CTAACACAAGTGGTAATTCTAGAATAAATCTAGTAACGAAATATATATTC
TCCTATTAGATGCGCGCAGGTTTATTCTCAAATTTGCACAAATTGCTGAT
ATGGTACTACTGCAACTGTACAGCTCTGGCCTGATTTTTGCACCATATAA
AGCGTTGATTAGAGAGATCTATGAAAGAGAACTTCCTACTTGGTTATCCA
GAGGCCCAAAGGTAGAAGAGTATTGGGATCCAGAGATATAAACGCTGGAG
GGCTATTCTTACGCGGTTACCTCGGTCACCTTCTCAAACAACGGACAGCT
GCTGGCATCCGGCTCGGGGGACAAGACCGTCAAGCTGTAGGATGCGGCCA
CGGGCACTCTTAAGTATATATTAGAGGACTATTCTAACAGAATTTACTCA
GTCATCTTCTCAAACAACGAGCAGCTACTGGCATCCGGCTCGGACGACAA
GACCATCAAGCTATGGGATGCGGCCACGGGCACTCTTAAGCATATATTAG
AGGGCCACTCTGGTTTGGTTTACTCGGTCGCCTTCTTAAACAACGGGCAG
CTGCTGGCATCCGGCTCGGGAAACAAGACCATCAAGCTGTGGGATGCGGC
CACGGGCGCTCTCAAACATACATTGGAGAATCATTCTAATCCGGTTTACT
CAGTCGCCTTCTCAAACAACGGGCAGCTGCTGGCATCCAGCTCGGGGAAC
AAGACCATTAAACTGTGGAATGCGGCCACGGGCGCTCTCAAGCATACATT
GGAAGGCCATTCTAATCCGGTTTACTCGGTCGCCTTCTCAAATAACAGGC
AGCTGCTGGCGTCCGGCTCACGCGACAAGACTATCAAGCTGTGGAATACG
GCCACGGGCGCTCTTAAGCATACATTAAAGGGCTATTCTAACTGGGTTTA
CTCGGTCGCCTTCTCAAACAACGGGCAGCTGCTGGCATCCGGCTCGTACG
ACAAGACCATCAAGCTATGGAATGCGGCCACGGGCGCTCTCAAGTATACA
TTAGAAGGCCATTCTAATCCGGTTTACTCGGTCGCCTTCTCAAACAACAG
GCAGCTGCTGGCATCCGGCTCGCACGACAAGACCATCAAGCTGTGGGATG
CGGCCACGGGCGCTCTCAAGCATGATATAAGCACTAATAATATGGCCACC
AGTGTTGAATTTTCGGAGCACCTGCCACTACTGATTAGTAATATAGGATC
TTTTGATATCCGAAACTACTATGAAAGCTTCTTAACTTCCTCCGAGAAGG
TGGCAGAGATATCTCTGGAAGCAGATCAATGGATTACTGTGCAGGGTCAA
AGAGAGCTATAA
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Coding sequence (CDS) from alignment at An13:801118..802529+

>CBS51388_008509-T1 ID=CBS51388_008509-T1|Name=CBS51388_008509-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3429bp|location=Sequence derived from alignment at An13:801118..802529+ (Aspergillus niger CBS 513.88)
ATGGGCATTCTAGGAATAATACCTGAAGCCATGATTGCAGTGAATTCATT
GCTCCAACTGACCAAAAATAAATCTAGTAACGAAATATATATTCTCCTAT
TAGATGCGCGCAGGTTTATTCTCAAATTTGCACAAATTGCTGATATGGTA
CTACTGCAACTGTACAGCTCTGGCCTGATTTTTGCACCATATAAAGCGTT
GATTAGAGAGATCTATGAAAGAGAACTTCCTACTTGGTTATCCAGAGGCC
CAAAGCTACTGGCATCCGGCTCGGACGACAAGACCATCAAGCTATGGGAT
GCGGCCACGGGCACTCTTAAGCATATATTAGAGGGCCACTCTGGTTTGGT
TTACTCGGTCGCCTTCTTAAACAACGGGCAGCTGCTGGCATCCGGCTCGG
GAAACAAGACCATCAAGCTGTGGGATGCGGCCACGGGCGCTCTCAAACAT
ACATTGGAGAATCATTCTAATCCGGTTTACTCAGTCGCCTTCTCAAACAA
CGGGCAGCTGCTGGCATCCAGCTCGGGGAACAAGACCATTAAACTGTGGA
ATGCGGCCACGGGCGCTCTCAAGCATACATTGGAAGGCCATTCTAATCCG
GTTTACTCGGTCGCCTTCTCAAATAACAGGCAGCTGCTGGCGTCCGGCTC
ACGCGACAAGACTATCAAGCTGTGGAATACGGCCACGGGCGCTCTTAAGC
ATACATTAAAGGGCTATTCTAACTGGGTTTACTCGGTCGCCTTCTCAAAC
AACGGGCAGCTGCTGGCATCCGGCTCGTACGACAAGACCATCAAGCTATG
GAATGCGGCCACGGGCGCTCTCAAGTATACATTAGAAGGCCATTCTAATC
CGGTTTACTCGGTCGCCTTCTCAAACAACAGGCAGCTGCTGGCATCCGGC
TCGCACGACAAGACCATCAAGCTGTGGGATGCGGCCACGGGCGCTCTCAA
GCATGATATAAGCACTAATAATATGGCCACCAGTGTTGAATTTTCGGAGC
ACCTGCCACTACTGATTAGTAATATAGGATCTTTTGATATCCGAAACTAC
TATGAAAGCTTCTTAACTTCCTCCGAGAAGGTGGCAGAGATATCTCTGGA
AGCAGATCAATGGATTACTGTGCAGGGTCAAAGAGAGCTATAAATGGGCA
TTCTAGGAATAATACCTGAAGCCATGATTGCAGTGAATTCATTGCTCCAA
CTGACCAAAAATAAATCTAGTAACGAAATATATATTCTCCTATTAGATGC
GCGCAGGTTTATTCTCAAATTTGCACAAATTGCTGATATGGTACTACTGC
AACTGTACAGCTCTGGCCTGATTTTTGCACCATATAAAGCGTTGATTAGA
GAGATCTATGAAAGAGAACTTCCTACTTGGTTATCCAGAGGCCCAAAGCT
ACTGGCATCCGGCTCGGACGACAAGACCATCAAGCTATGGGATGCGGCCA
CGGGCACTCTTAAGCATATATTAGAGGGCCACTCTGGTTTGGTTTACTCG
GTCGCCTTCTTAAACAACGGGCAGCTGCTGGCATCCGGCTCGGGAAACAA
GACCATCAAGCTGTGGGATGCGGCCACGGGCGCTCTCAAACATACATTGG
AGAATCATTCTAATCCGGTTTACTCAGTCGCCTTCTCAAACAACGGGCAG
CTGCTGGCATCCAGCTCGGGGAACAAGACCATTAAACTGTGGAATGCGGC
CACGGGCGCTCTCAAGCATACATTGGAAGGCCATTCTAATCCGGTTTACT
CGGTCGCCTTCTCAAATAACAGGCAGCTGCTGGCGTCCGGCTCACGCGAC
AAGACTATCAAGCTGTGGAATACGGCCACGGGCGCTCTTAAGCATACATT
AAAGGGCTATTCTAACTGGGTTTACTCGGTCGCCTTCTCAAACAACGGGC
AGCTGCTGGCATCCGGCTCGTACGACAAGACCATCAAGCTATGGAATGCG
GCCACGGGCGCTCTCAAGTATACATTAGAAGGCCATTCTAATCCGGTTTA
CTCGGTCGCCTTCTCAAACAACAGGCAGCTGCTGGCATCCGGCTCGCACG
ACAAGACCATCAAGCTGTGGGATGCGGCCACGGGCGCTCTCAAGCATGAT
ATAAGCACTAATAATATGGCCACCAGTGTTGAATTTTCGGAGCACCTGCC
ACTACTGATTAGTAATATAGGATCTTTTGATATCCGAAACTACTATGAAA
GCTTCTTAACTTCCTCCGAGAAGGTGGCAGAGATATCTCTGGAAGCAGAT
CAATGGATTACTGTGCAGGGTCAAAGAGAGCTATAAATGGGCATTCTAGG
AATAATACCTGAAGCCATGATTGCAGTGAATTCATTGCTCCAACTGACCA
AAAATAAATCTAGTAACGAAATATATATTCTCCTATTAGATGCGCGCAGG
TTTATTCTCAAATTTGCACAAATTGCTGATATGGTACTACTGCAACTGTA
CAGCTCTGGCCTGATTTTTGCACCATATAAAGCGTTGATTAGAGAGATCT
ATGAAAGAGAACTTCCTACTTGGTTATCCAGAGGCCCAAAGCTACTGGCA
TCCGGCTCGGACGACAAGACCATCAAGCTATGGGATGCGGCCACGGGCAC
TCTTAAGCATATATTAGAGGGCCACTCTGGTTTGGTTTACTCGGTCGCCT
TCTTAAACAACGGGCAGCTGCTGGCATCCGGCTCGGGAAACAAGACCATC
AAGCTGTGGGATGCGGCCACGGGCGCTCTCAAACATACATTGGAGAATCA
TTCTAATCCGGTTTACTCAGTCGCCTTCTCAAACAACGGGCAGCTGCTGG
CATCCAGCTCGGGGAACAAGACCATTAAACTGTGGAATGCGGCCACGGGC
GCTCTCAAGCATACATTGGAAGGCCATTCTAATCCGGTTTACTCGGTCGC
CTTCTCAAATAACAGGCAGCTGCTGGCGTCCGGCTCACGCGACAAGACTA
TCAAGCTGTGGAATACGGCCACGGGCGCTCTTAAGCATACATTAAAGGGC
TATTCTAACTGGGTTTACTCGGTCGCCTTCTCAAACAACGGGCAGCTGCT
GGCATCCGGCTCGTACGACAAGACCATCAAGCTATGGAATGCGGCCACGG
GCGCTCTCAAGTATACATTAGAAGGCCATTCTAATCCGGTTTACTCGGTC
GCCTTCTCAAACAACAGGCAGCTGCTGGCATCCGGCTCGCACGACAAGAC
CATCAAGCTGTGGGATGCGGCCACGGGCGCTCTCAAGCATGATATAAGCA
CTAATAATATGGCCACCAGTGTTGAATTTTCGGAGCACCTGCCACTACTG
ATTAGTAATATAGGATCTTTTGATATCCGAAACTACTATGAAAGCTTCTT
AACTTCCTCCGAGAAGGTGGCAGAGATATCTCTGGAAGCAGATCAATGGA
TTACTGTGCAGGGTCAAAGAGAGCTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008509CBS51388_008509Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008509-T1.exon1CBS51388_008509-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_008509-T1.exon2CBS51388_008509-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008509-T1.exon3CBS51388_008509-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008509-T1.cdsCBS51388_008509-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008509-T1CBS51388_008509-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF13360
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An13supercontigAn13:801118..802529 +
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