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CBS51388_008562-T1, CBS51388_008562-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008562-T1
Unique NameCBS51388_008562-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:46230..47563+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008562-T1 ID=CBS51388_008562-T1|Name=CBS51388_008562-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1334bp|location=Sequence derived from alignment at An14:46230..47563+ (Aspergillus niger CBS 513.88)
ATGGCGCTCGACAACTATTATCGCAATAAGATTGAGAGCATGAAGCTCGA
AATCATCCAGGGTCAGGCTGTCTTACGGAGACTGGAAGCACAGCGCAATG
ACTATAATTCGAGGGTGCGGTTACTTCGGGAAGAACTCGGCTTGCTTCAA
CAGCCTGGTTCCTATGTCGGGGAGGTAGTCAAAGTGATGAGCACCAAGAA
AGTCCTCGTCAAAGTGCATCCCGAGGGCAAATATGGTAAACCCCCTCTGC
AGATTTGCTTAGCTCGAGTCTTTGCTTGCTCAACTCCGTGCGTCCCTTAC
TAACTTCTCTTGCGACGCTACAGTGGTGGACATTGCGGATGGCGTTGATA
TCAGCAAGCTCACTGTAGGAAAGCGAGTCGCTTTACTCTCGGATTCCTAT
AAGTTGGAGAAGATGCTACCCTCGTCGGTTGACCCGCTGGTGTCGCTAAT
GATGGTCGAGAAAGTGCCTGACAGCACGTATGACATGATCGGTGGACTTG
ACCAGCAGATCAAGGAGATCAAGGAAGTCATCGAGCTTGGTTTAAAACAT
CCGGAGTTGTTCGAGTCGCTTGGTATCGCACAACCGAAGGGAGTACTCCT
CTACGGACCGCCAGGAACCGGCAAAACCCTGCTTGCCCGAGCGGTAGCCC
ATCACACCGATTGTCGGTTCATCAGAGTGAGCGGATCGGAATTGGTGCAA
AAATACATCGGTGAAGGTAGCCGCATGGTTCGCGAGCTATTCGTAATGGC
TCGAGAACATGCTCCGAGTATCATATTCATGGATGAGATTGATAGCATTG
GATCCAGCCGCATAGACTCGGCGGGTTCGGGTGATTCAGAGGTACAACGG
ACGATGCTTGAGCTCCTCAATCAACTGGACGGATTTGAACCTACCAAGAA
CATCAAGATCATCATGGCCACCAACCGGCTTGACATCCTGGACCCGGCCT
TGTTACGTCCTGGCCGGATTGACCGGAAGATTGAGTTCCCTCCGCCGTCG
TGAGTATCCCTTGTGACTTGGCTCTTATCGGGTGAAGCTTATGTTACGTT
TTACTGATCAATTTCCTTCTTTCAGGGTGGAGGCTCGTGCCGATATTCTG
CGAATCCACTCGCGGTCAATGAACTTGACGCGAGGCATCAACCTAACGAA
GATTGCGGAGAAGATGAACGGATGTTCTGGAGCTGAGCTGAAGGGTGTGT
GCACGGAAGCAGGCATGTACGCTCTGCGAGAGCGGCGAGTACACGTTACG
CAAGAGGATTTCGACCTAGCCACCGCCAAGATCCTCAACAAGCACGACGA
CAAAGAAGTCGCGGTCTCTAAGCTTTTCAAGTAA
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Coding sequence (CDS) from alignment at An14:46230..47563+

>CBS51388_008562-T1 ID=CBS51388_008562-T1|Name=CBS51388_008562-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3510bp|location=Sequence derived from alignment at An14:46230..47563+ (Aspergillus niger CBS 513.88)
ATGGCGCTCGACAACTATTATCGCAATAAGATTGAGAGCATGAAGCTCGA
AATCATCCAGGGTCAGGCTGTCTTACGGAGACTGGAAGCACAGCGCAATG
ACTATAATTCGAGGGTGCGGTTACTTCGGGAAGAACTCGGCTTGCTTCAA
CAGCCTGGTTCCTATGTCGGGGAGGTAGTCAAAGTGATGAGCACCAAGAA
AGTCCTCGTCAAAGTGCATCCCGAGGGCAAATATGTGGTGGACATTGCGG
ATGGCGTTGATATCAGCAAGCTCACTGTAGGAAAGCGAGTCGCTTTACTC
TCGGATTCCTATAAGTTGGAGAAGATGCTACCCTCGTCGGTTGACCCGCT
GGTGTCGCTAATGATGGTCGAGAAAGTGCCTGACAGCACGTATGACATGA
TCGGTGGACTTGACCAGCAGATCAAGGAGATCAAGGAAGTCATCGAGCTT
GGTTTAAAACATCCGGAGTTGTTCGAGTCGCTTGGTATCGCACAACCGAA
GGGAGTACTCCTCTACGGACCGCCAGGAACCGGCAAAACCCTGCTTGCCC
GAGCGGTAGCCCATCACACCGATTGTCGGTTCATCAGAGTGAGCGGATCG
GAATTGGTGCAAAAATACATCGGTGAAGGTAGCCGCATGGTTCGCGAGCT
ATTCGTAATGGCTCGAGAACATGCTCCGAGTATCATATTCATGGATGAGA
TTGATAGCATTGGATCCAGCCGCATAGACTCGGCGGGTTCGGGTGATTCA
GAGGTACAACGGACGATGCTTGAGCTCCTCAATCAACTGGACGGATTTGA
ACCTACCAAGAACATCAAGATCATCATGGCCACCAACCGGCTTGACATCC
TGGACCCGGCCTTGTTACGTCCTGGCCGGATTGACCGGAAGATTGAGTTC
CCTCCGCCGTCGGTGGAGGCTCGTGCCGATATTCTGCGAATCCACTCGCG
GTCAATGAACTTGACGCGAGGCATCAACCTAACGAAGATTGCGGAGAAGA
TGAACGGATGTTCTGGAGCTGAGCTGAAGGGTGTGTGCACGGAAGCAGGC
ATGTACGCTCTGCGAGAGCGGCGAGTACACGTTACGCAAGAGGATTTCGA
CCTAGCCACCGCCAAGATCCTCAACAAGCACGACGACAAAGAAGTCGCGG
TCTCTAAGCTTTTCAAGTAAATGGCGCTCGACAACTATTATCGCAATAAG
ATTGAGAGCATGAAGCTCGAAATCATCCAGGGTCAGGCTGTCTTACGGAG
ACTGGAAGCACAGCGCAATGACTATAATTCGAGGGTGCGGTTACTTCGGG
AAGAACTCGGCTTGCTTCAACAGCCTGGTTCCTATGTCGGGGAGGTAGTC
AAAGTGATGAGCACCAAGAAAGTCCTCGTCAAAGTGCATCCCGAGGGCAA
ATATGTGGTGGACATTGCGGATGGCGTTGATATCAGCAAGCTCACTGTAG
GAAAGCGAGTCGCTTTACTCTCGGATTCCTATAAGTTGGAGAAGATGCTA
CCCTCGTCGGTTGACCCGCTGGTGTCGCTAATGATGGTCGAGAAAGTGCC
TGACAGCACGTATGACATGATCGGTGGACTTGACCAGCAGATCAAGGAGA
TCAAGGAAGTCATCGAGCTTGGTTTAAAACATCCGGAGTTGTTCGAGTCG
CTTGGTATCGCACAACCGAAGGGAGTACTCCTCTACGGACCGCCAGGAAC
CGGCAAAACCCTGCTTGCCCGAGCGGTAGCCCATCACACCGATTGTCGGT
TCATCAGAGTGAGCGGATCGGAATTGGTGCAAAAATACATCGGTGAAGGT
AGCCGCATGGTTCGCGAGCTATTCGTAATGGCTCGAGAACATGCTCCGAG
TATCATATTCATGGATGAGATTGATAGCATTGGATCCAGCCGCATAGACT
CGGCGGGTTCGGGTGATTCAGAGGTACAACGGACGATGCTTGAGCTCCTC
AATCAACTGGACGGATTTGAACCTACCAAGAACATCAAGATCATCATGGC
CACCAACCGGCTTGACATCCTGGACCCGGCCTTGTTACGTCCTGGCCGGA
TTGACCGGAAGATTGAGTTCCCTCCGCCGTCGGTGGAGGCTCGTGCCGAT
ATTCTGCGAATCCACTCGCGGTCAATGAACTTGACGCGAGGCATCAACCT
AACGAAGATTGCGGAGAAGATGAACGGATGTTCTGGAGCTGAGCTGAAGG
GTGTGTGCACGGAAGCAGGCATGTACGCTCTGCGAGAGCGGCGAGTACAC
GTTACGCAAGAGGATTTCGACCTAGCCACCGCCAAGATCCTCAACAAGCA
CGACGACAAAGAAGTCGCGGTCTCTAAGCTTTTCAAGTAAATGGCGCTCG
ACAACTATTATCGCAATAAGATTGAGAGCATGAAGCTCGAAATCATCCAG
GGTCAGGCTGTCTTACGGAGACTGGAAGCACAGCGCAATGACTATAATTC
GAGGGTGCGGTTACTTCGGGAAGAACTCGGCTTGCTTCAACAGCCTGGTT
CCTATGTCGGGGAGGTAGTCAAAGTGATGAGCACCAAGAAAGTCCTCGTC
AAAGTGCATCCCGAGGGCAAATATGTGGTGGACATTGCGGATGGCGTTGA
TATCAGCAAGCTCACTGTAGGAAAGCGAGTCGCTTTACTCTCGGATTCCT
ATAAGTTGGAGAAGATGCTACCCTCGTCGGTTGACCCGCTGGTGTCGCTA
ATGATGGTCGAGAAAGTGCCTGACAGCACGTATGACATGATCGGTGGACT
TGACCAGCAGATCAAGGAGATCAAGGAAGTCATCGAGCTTGGTTTAAAAC
ATCCGGAGTTGTTCGAGTCGCTTGGTATCGCACAACCGAAGGGAGTACTC
CTCTACGGACCGCCAGGAACCGGCAAAACCCTGCTTGCCCGAGCGGTAGC
CCATCACACCGATTGTCGGTTCATCAGAGTGAGCGGATCGGAATTGGTGC
AAAAATACATCGGTGAAGGTAGCCGCATGGTTCGCGAGCTATTCGTAATG
GCTCGAGAACATGCTCCGAGTATCATATTCATGGATGAGATTGATAGCAT
TGGATCCAGCCGCATAGACTCGGCGGGTTCGGGTGATTCAGAGGTACAAC
GGACGATGCTTGAGCTCCTCAATCAACTGGACGGATTTGAACCTACCAAG
AACATCAAGATCATCATGGCCACCAACCGGCTTGACATCCTGGACCCGGC
CTTGTTACGTCCTGGCCGGATTGACCGGAAGATTGAGTTCCCTCCGCCGT
CGGTGGAGGCTCGTGCCGATATTCTGCGAATCCACTCGCGGTCAATGAAC
TTGACGCGAGGCATCAACCTAACGAAGATTGCGGAGAAGATGAACGGATG
TTCTGGAGCTGAGCTGAAGGGTGTGTGCACGGAAGCAGGCATGTACGCTC
TGCGAGAGCGGCGAGTACACGTTACGCAAGAGGATTTCGACCTAGCCACC
GCCAAGATCCTCAACAAGCACGACGACAAAGAAGTCGCGGTCTCTAAGCT
TTTCAAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LET1CBS51388_008562Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008562-T1.exon1CBS51388_008562-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_008562-T1.exon2CBS51388_008562-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008562-T1.exon3CBS51388_008562-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008562-T1.cdsCBS51388_008562-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008562-T1CBS51388_008562-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003960
DBxrefInterPro:IPR032501
DBxrefInterPro:IPR005937
DBxrefInterPro:IPR041569
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR003593
DBxrefPFAM:PF16450
DBxrefPFAM:PF17862
DBxrefPFAM:PF07728
DBxrefPFAM:PF07724
DBxrefPFAM:PF00004
Product26S protease regulatory subunit 8
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:46230..47563 +
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