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CBS51388_008564-T1, CBS51388_008564-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008564-T1
Unique NameCBS51388_008564-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:54413..56740+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008564-T1 ID=CBS51388_008564-T1|Name=CBS51388_008564-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2328bp|location=Sequence derived from alignment at An14:54413..56740+ (Aspergillus niger CBS 513.88)
ATGACGGGGAACCAAGGTTCCTTGCGCTGGTCATCGCAGTTGACCGTTGC
TCCAGCCCAGCAAATCCCCAAGCTTTCCGGCGATAAGATCATACTGCCAC
CATCCGCGCTCGAGCAGCTTCTCGCGGCTGCCCCGCTTCAAGAGGTAACT
TCGTCAGGCCCAGCACGCCCATACACCAACACTTTCGATCCCTTTAATCC
GCACACCTTCGCCGCCGAGTCCCAAGCGCGCGAACGGGCGGTGGATCGCC
AGCAGCAATTGCCCCATCCGCTTACGTTCCGCATCGTGAACCCTCAGAAC
GACCGGGTGGTATATGCTGGTGTCCGCGAGTTTTCTGCGCCAGAGAACGA
GATCGGCCTTAGCACATTTTTACGTGGGGCCCTTGGCATTGATGGTACGC
GACAACCGTCACCACACGGCGGTGATGGTAATGATGGTGATGTGACAGAC
AATGCGCCAGCCGCGCCGACCACGGTCACGGTCCATGCGCAACAGTTACC
GAAAGGTACTTATGTCCGCCTGCGCCCTCTAGAAGCCGGGTACGACCCGG
GAAATTGGAAAGCTTTGCTCGAACAACAGCTGCGGGACAATTACACCACC
TTAACCTCTGGAGAGGTCCTCACCGTTGCAGGGGGCCGCAATCAGTCGTT
TCAGTTCTTGGTTGACAAAGTTGAGCCCCATGGCAATGGCATCTGCGTTG
TGGATACGGATCTGGAAGTTGATATTGTCGCCTTGACAGAGGACCAAGCC
AGAGAGACGTTAGAGAAACGGTTGGAGAAATCTTCCCGTGTCTCTGCGAA
TAGGGCAGGCACATCCGTGGGAGGTGAGCTGCGACTCGGTCAGGTAGTAA
GTGGTCAGGTTGCGCTTGGGGACTATGTCGACTACGAGGTCCTTAAATGG
GATCCTTCGAATGCACTGGAACTGTCTGTCAAGGGTGCCGACGATGTAGA
TCTGTGTCTTTTTGCCAGTCCCCTTTCTGCTCGCCAGAGGAACCGACCGC
GGGAGGATGAGCATGTTTTCGGTGACCTCTCAAATCGACCGACTAAACGG
ATTAGGATCCAACCGACGAATGTGGATATGGAAGGCGCTGAGTTGCTGTA
TATATCGGTCCATGCCCCCACTTCCACCGACAGTTCAGGAAATGGACTTT
CGGCGCTGCCGTATAGCCTACAGGTCCATGTGGGCTCGTCACCCGCACAA
GCTGAGAACGCTGCAGACAGCGAGCCAGAAAGTCGTGAACCGGGTGATGT
GCAGTGTAAGAATTGTCGTCAATGGGTACCTGAGCGGACATTGATGCTAC
ATGAGAACTTTTGCCTTCGAAACAACATTCTCTGCCCCCAGTGCCAGAAC
GTGTTCCAGAAACGGTCTCCGGAATGGCAGACACATTGGCATTGTCCTCA
TGACTCGGCTTATGGCACCGGTGACGCCGAAAAGAATCGACATAATCACT
TTTTCCACAGCAAGCGCTCCTGTAGTGGCTGTGGATTCGAGGCGGAGGAC
CTCTCACGTCTCGCTCAACACCGCACAACTGTCTGTCCGGCAAAACCCAT
TCTGTGCCAATTTTGTCATCTTGTGGTCCCTCAAAAGAGTGAATCAGACC
CCGAAATGGACGATCCGGACGTTTTAGTCTCCGGCCTCACACCACATGAA
TTGGTGGACGGTGGCCGGACAACTGAATGCCACCTCTGTGACAAAATCAT
CCGTCTCCGCGACATGAAAATGCACCTTCGCCATCATGATCTAGAACGTC
TGTCTCGACCCACTCCTCGCATATGCTTAAATCAAAATTGCGGACGGACG
CTTGATGGACGCGGTACTCAAACTGCAGTCAACCTCGGTCTATGCAGCAT
CTGCTTTGGACCACTGTACGTAGACACCTACGATCCCGAAGGCAAAGCAC
TCCGGCGGCGCATCGAGCGCCGCTACCTCTCTCAGATGATGAGCGGCTGC
GGCAAACCATGGTGTCAAAACGAATATTGCAAAACGGGCAAACAAGCTAG
ACCATCTTCCACATCTGGTGCGTCTGCCCCGTTGGGCGCGGCAGCTATTC
TAGCCGCAGTGCGGCCTTTGCTTGACGCCGTCAATCTTCGAGGAAATGCA
CCGAACACCGCTCCGTTTTACCTTTGCACGGATCAGACAGGCCAGCAACG
CCGCATCGCTGCAGAAATGCTTTCAACTGAAGGCGCAGTAGCTGACGGCA
AGACCTATGCATTGCCATGGTGCGTTTCCGCCGTTGAAACCACGGCGGGA
AATTTAGACAAGGCGCGAGAGTGGTTGGAAAATTGGGCGCCTGCGCAAGG
GGAAGGCACGGAATCTTTTCAACGGTAG
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Coding sequence (CDS) from alignment at An14:54413..56740+

>CBS51388_008564-T1 ID=CBS51388_008564-T1|Name=CBS51388_008564-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2328bp|location=Sequence derived from alignment at An14:54413..56740+ (Aspergillus niger CBS 513.88)
ATGACGGGGAACCAAGGTTCCTTGCGCTGGTCATCGCAGTTGACCGTTGC
TCCAGCCCAGCAAATCCCCAAGCTTTCCGGCGATAAGATCATACTGCCAC
CATCCGCGCTCGAGCAGCTTCTCGCGGCTGCCCCGCTTCAAGAGGTAACT
TCGTCAGGCCCAGCACGCCCATACACCAACACTTTCGATCCCTTTAATCC
GCACACCTTCGCCGCCGAGTCCCAAGCGCGCGAACGGGCGGTGGATCGCC
AGCAGCAATTGCCCCATCCGCTTACGTTCCGCATCGTGAACCCTCAGAAC
GACCGGGTGGTATATGCTGGTGTCCGCGAGTTTTCTGCGCCAGAGAACGA
GATCGGCCTTAGCACATTTTTACGTGGGGCCCTTGGCATTGATGGTACGC
GACAACCGTCACCACACGGCGGTGATGGTAATGATGGTGATGTGACAGAC
AATGCGCCAGCCGCGCCGACCACGGTCACGGTCCATGCGCAACAGTTACC
GAAAGGTACTTATGTCCGCCTGCGCCCTCTAGAAGCCGGGTACGACCCGG
GAAATTGGAAAGCTTTGCTCGAACAACAGCTGCGGGACAATTACACCACC
TTAACCTCTGGAGAGGTCCTCACCGTTGCAGGGGGCCGCAATCAGTCGTT
TCAGTTCTTGGTTGACAAAGTTGAGCCCCATGGCAATGGCATCTGCGTTG
TGGATACGGATCTGGAAGTTGATATTGTCGCCTTGACAGAGGACCAAGCC
AGAGAGACGTTAGAGAAACGGTTGGAGAAATCTTCCCGTGTCTCTGCGAA
TAGGGCAGGCACATCCGTGGGAGGTGAGCTGCGACTCGGTCAGGTAGTAA
GTGGTCAGGTTGCGCTTGGGGACTATGTCGACTACGAGGTCCTTAAATGG
GATCCTTCGAATGCACTGGAACTGTCTGTCAAGGGTGCCGACGATGTAGA
TCTGTGTCTTTTTGCCAGTCCCCTTTCTGCTCGCCAGAGGAACCGACCGC
GGGAGGATGAGCATGTTTTCGGTGACCTCTCAAATCGACCGACTAAACGG
ATTAGGATCCAACCGACGAATGTGGATATGGAAGGCGCTGAGTTGCTGTA
TATATCGGTCCATGCCCCCACTTCCACCGACAGTTCAGGAAATGGACTTT
CGGCGCTGCCGTATAGCCTACAGGTCCATGTGGGCTCGTCACCCGCACAA
GCTGAGAACGCTGCAGACAGCGAGCCAGAAAGTCGTGAACCGGGTGATGT
GCAGTGTAAGAATTGTCGTCAATGGGTACCTGAGCGGACATTGATGCTAC
ATGAGAACTTTTGCCTTCGAAACAACATTCTCTGCCCCCAGTGCCAGAAC
GTGTTCCAGAAACGGTCTCCGGAATGGCAGACACATTGGCATTGTCCTCA
TGACTCGGCTTATGGCACCGGTGACGCCGAAAAGAATCGACATAATCACT
TTTTCCACAGCAAGCGCTCCTGTAGTGGCTGTGGATTCGAGGCGGAGGAC
CTCTCACGTCTCGCTCAACACCGCACAACTGTCTGTCCGGCAAAACCCAT
TCTGTGCCAATTTTGTCATCTTGTGGTCCCTCAAAAGAGTGAATCAGACC
CCGAAATGGACGATCCGGACGTTTTAGTCTCCGGCCTCACACCACATGAA
TTGGTGGACGGTGGCCGGACAACTGAATGCCACCTCTGTGACAAAATCAT
CCGTCTCCGCGACATGAAAATGCACCTTCGCCATCATGATCTAGAACGTC
TGTCTCGACCCACTCCTCGCATATGCTTAAATCAAAATTGCGGACGGACG
CTTGATGGACGCGGTACTCAAACTGCAGTCAACCTCGGTCTATGCAGCAT
CTGCTTTGGACCACTGTACGTAGACACCTACGATCCCGAAGGCAAAGCAC
TCCGGCGGCGCATCGAGCGCCGCTACCTCTCTCAGATGATGAGCGGCTGC
GGCAAACCATGGTGTCAAAACGAATATTGCAAAACGGGCAAACAAGCTAG
ACCATCTTCCACATCTGGTGCGTCTGCCCCGTTGGGCGCGGCAGCTATTC
TAGCCGCAGTGCGGCCTTTGCTTGACGCCGTCAATCTTCGAGGAAATGCA
CCGAACACCGCTCCGTTTTACCTTTGCACGGATCAGACAGGCCAGCAACG
CCGCATCGCTGCAGAAATGCTTTCAACTGAAGGCGCAGTAGCTGACGGCA
AGACCTATGCATTGCCATGGTGCGTTTCCGCCGTTGAAACCACGGCGGGA
AATTTAGACAAGGCGCGAGAGTGGTTGGAAAATTGGGCGCCTGCGCAAGG
GGAAGGCACGGAATCTTTTCAACGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008564CBS51388_008564Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008564-T1.exon1CBS51388_008564-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008564-T1.cdsCBS51388_008564-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008564-T1CBS51388_008564-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR004854
DBxrefInterPro:IPR032353
DBxrefInterPro:IPR042299
DBxrefInterPro:IPR042556
DBxrefPFAM:PF03152
DBxrefPFAM:PF16558
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:54413..56740 +
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