You are here

Home

CBS51388_008567-T1, CBS51388_008567-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008567-T1
Unique NameCBS51388_008567-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:60773..61732+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008567-T1 ID=CBS51388_008567-T1|Name=CBS51388_008567-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=960bp|location=Sequence derived from alignment at An14:60773..61732+ (Aspergillus niger CBS 513.88)
ATGGCGACAAAAGCGGCTTTCAAGCGCGTGCGTTGCGCCCTTTCAAAATG
CGGTCATTTTATTGCATTGTATAACTAACAGATGAACAGCTTACTCGCGA
GTATCAGAACATTCAGAAGAATCCCCCGCCTTACATTGTGGCACATCCGT
CAGAGTCCAACATACTCGAGTACGTCATTTACAACAGACTATCACCACCT
GCGTCGCTTGTTTGCGACTAAAGTTGACCTTTCATTCAGATGGCACTACA
TCCTTACGGGACCTCCGGGCACGCCGTATGAAAATGGCCAGTATTGGGGT
ACCCTAATGTTCCCTCCCGAGTACCCGTTTGCTCCTCCGGCTATTCGCAT
GCACACTCCTAGCGGTCGTTTTCAACCATCAACTCGGCTATGCCTCAGCA
TCAGCGACTTTCATCCGAAGTCATTTAATCCCGCATGGGAGGTTTCTACC
ATCCTCATTGGCTTGCTTTCCTTCATGACGAGCGAGGAGATGACCACCGG
AAGCGTGAGTGCATCGGAGGCAGAGCGACGAGTGCTGGCGGCACGGTCTA
GGTGGTGGAATTCCACTGGTGGCGGTTCCCATGTCAGTGCCACCCCAGGA
GTGACCCCTACTGCCAAGGGTATCAACAATGTGAAAGCTGGAGACGGCGG
TCTGAAGTTTCGCTCGGAGTGGCCAGAGCTCGACCAAGAGAATTGGAGGT
GGATGAAGGATAGTCGCATCGACACCAACACTGGCCAGCTCATGCCTGAT
CCCAGTGCGACCAGATGCTCTCCAGAGACAAGTGCGCTTCGCCGACGACC
GAACGGTAGCGCCCCGGGACTCGGTGCGGTGATGGAAGGCGGCCATGTCG
CCCGAGAAGCAGGCCAAAGCTGGGTCCGCCGCAACAAGATCTGGCTTGGG
TTTGCAATCCTATTCGGATATGCACTTCTGACCAGGCTAGTGAAAGATGT
TCAAGGCTAA
back to top

Coding sequence (CDS) from alignment at An14:60773..61732+

>CBS51388_008567-T1 ID=CBS51388_008567-T1|Name=CBS51388_008567-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2484bp|location=Sequence derived from alignment at An14:60773..61732+ (Aspergillus niger CBS 513.88)
ATGGCGACAAAAGCGGCTTTCAAGCGCCTTACTCGCGAGTATCAGAACAT
TCAGAAGAATCCCCCGCCTTACATTGTGGCACATCCGTCAGAGTCCAACA
TACTCGAATGGCACTACATCCTTACGGGACCTCCGGGCACGCCGTATGAA
AATGGCCAGTATTGGGGTACCCTAATGTTCCCTCCCGAGTACCCGTTTGC
TCCTCCGGCTATTCGCATGCACACTCCTAGCGGTCGTTTTCAACCATCAA
CTCGGCTATGCCTCAGCATCAGCGACTTTCATCCGAAGTCATTTAATCCC
GCATGGGAGGTTTCTACCATCCTCATTGGCTTGCTTTCCTTCATGACGAG
CGAGGAGATGACCACCGGAAGCGTGAGTGCATCGGAGGCAGAGCGACGAG
TGCTGGCGGCACGGTCTAGGTGGTGGAATTCCACTGGTGGCGGTTCCCAT
GTCAGTGCCACCCCAGGAGTGACCCCTACTGCCAAGGGTATCAACAATGT
GAAAGCTGGAGACGGCGGTCTGAAGTTTCGCTCGGAGTGGCCAGAGCTCG
ACCAAGAGAATTGGAGGTGGATGAAGGATAGTCGCATCGACACCAACACT
GGCCAGCTCATGCCTGATCCCAGTGCGACCAGATGCTCTCCAGAGACAAG
TGCGCTTCGCCGACGACCGAACGGTAGCGCCCCGGGACTCGGTGCGGTGA
TGGAAGGCGGCCATGTCGCCCGAGAAGCAGGCCAAAGCTGGGTCCGCCGC
AACAAGATCTGGCTTGGGTTTGCAATCCTATTCGGATATGCACTTCTGAC
CAGGCTAGTGAAAGATGTTCAAGGCTAAATGGCGACAAAAGCGGCTTTCA
AGCGCCTTACTCGCGAGTATCAGAACATTCAGAAGAATCCCCCGCCTTAC
ATTGTGGCACATCCGTCAGAGTCCAACATACTCGAATGGCACTACATCCT
TACGGGACCTCCGGGCACGCCGTATGAAAATGGCCAGTATTGGGGTACCC
TAATGTTCCCTCCCGAGTACCCGTTTGCTCCTCCGGCTATTCGCATGCAC
ACTCCTAGCGGTCGTTTTCAACCATCAACTCGGCTATGCCTCAGCATCAG
CGACTTTCATCCGAAGTCATTTAATCCCGCATGGGAGGTTTCTACCATCC
TCATTGGCTTGCTTTCCTTCATGACGAGCGAGGAGATGACCACCGGAAGC
GTGAGTGCATCGGAGGCAGAGCGACGAGTGCTGGCGGCACGGTCTAGGTG
GTGGAATTCCACTGGTGGCGGTTCCCATGTCAGTGCCACCCCAGGAGTGA
CCCCTACTGCCAAGGGTATCAACAATGTGAAAGCTGGAGACGGCGGTCTG
AAGTTTCGCTCGGAGTGGCCAGAGCTCGACCAAGAGAATTGGAGGTGGAT
GAAGGATAGTCGCATCGACACCAACACTGGCCAGCTCATGCCTGATCCCA
GTGCGACCAGATGCTCTCCAGAGACAAGTGCGCTTCGCCGACGACCGAAC
GGTAGCGCCCCGGGACTCGGTGCGGTGATGGAAGGCGGCCATGTCGCCCG
AGAAGCAGGCCAAAGCTGGGTCCGCCGCAACAAGATCTGGCTTGGGTTTG
CAATCCTATTCGGATATGCACTTCTGACCAGGCTAGTGAAAGATGTTCAA
GGCTAAATGGCGACAAAAGCGGCTTTCAAGCGCCTTACTCGCGAGTATCA
GAACATTCAGAAGAATCCCCCGCCTTACATTGTGGCACATCCGTCAGAGT
CCAACATACTCGAATGGCACTACATCCTTACGGGACCTCCGGGCACGCCG
TATGAAAATGGCCAGTATTGGGGTACCCTAATGTTCCCTCCCGAGTACCC
GTTTGCTCCTCCGGCTATTCGCATGCACACTCCTAGCGGTCGTTTTCAAC
CATCAACTCGGCTATGCCTCAGCATCAGCGACTTTCATCCGAAGTCATTT
AATCCCGCATGGGAGGTTTCTACCATCCTCATTGGCTTGCTTTCCTTCAT
GACGAGCGAGGAGATGACCACCGGAAGCGTGAGTGCATCGGAGGCAGAGC
GACGAGTGCTGGCGGCACGGTCTAGGTGGTGGAATTCCACTGGTGGCGGT
TCCCATGTCAGTGCCACCCCAGGAGTGACCCCTACTGCCAAGGGTATCAA
CAATGTGAAAGCTGGAGACGGCGGTCTGAAGTTTCGCTCGGAGTGGCCAG
AGCTCGACCAAGAGAATTGGAGGTGGATGAAGGATAGTCGCATCGACACC
AACACTGGCCAGCTCATGCCTGATCCCAGTGCGACCAGATGCTCTCCAGA
GACAAGTGCGCTTCGCCGACGACCGAACGGTAGCGCCCCGGGACTCGGTG
CGGTGATGGAAGGCGGCCATGTCGCCCGAGAAGCAGGCCAAAGCTGGGTC
CGCCGCAACAAGATCTGGCTTGGGTTTGCAATCCTATTCGGATATGCACT
TCTGACCAGGCTAGTGAAAGATGTTCAAGGCTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008567CBS51388_008567Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008567-T1.exon1CBS51388_008567-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_008567-T1.exon2CBS51388_008567-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008567-T1.exon3CBS51388_008567-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008567-T1.cdsCBS51388_008567-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008567-T1CBS51388_008567-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR016135
DBxrefInterPro:IPR000608
DBxrefPFAM:PF00179
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:60773..61732 +
Powered by Drupal