|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An14:109616..110718- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008587-T1 ID=CBS51388_008587-T1|Name=CBS51388_008587-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1103bp|location=Sequence derived from alignment at An14:109616..110718- (Aspergillus niger CBS 513.88)
ATGCTATTTTCATCATTGCGCTCTCTCTCTCACCGGGGCCCCTCACTGGC
CTCGCGGGCCTTCAGCACCTCCCCCGCCGTCCATGCCGCCGAGGTTAAGT
CGCTGGGTGTGATAGGAGCTGGGCAGATGGTCAGTGTGTTCCTGACAATA
TGATGTTCCCTCCAGTGAGAGAAACAGGGCAACTAAGATTCTATAGGGAT
TAGGAATTGCTCTAGTAGCTGCCCAGAAAGCCCAAGTCCCGGTGACCCTA
ATCGACAACTCCCAAGCATCCATCGACAAGGGCCTCAAGTTTGCCGGTAC
ACAGCACCCACTCTTCTTCTCTCCCTCACCATCTTTCCAATTTCATTTAA
CTAAACAACTACATTCTTCCAGACAAACTCCTCGATAAAGATGTATCAAA
AGAACGCCTCACCCGGGACGCCGCCGATGCCGCCCGGGCACGCATCACCC
CAAGCCTGAAAATGGACGACCTCTCCAGCGTCGACTTCGTCATCGAAGCC
GTCCCCGAGATCCCCGACCTCAAGACCTCTATCTTCTCAAAACTCGCCCA
AATTGCCCCTAAGCACGCCATCCTCGCTACTAACACCTCCTCCATCTCCA
TCACCAAGATCGCAGCCGCCACCACAACAGACCCCACGGACCTGCAGGCC
CCCTCGCGTGTCATCTCCACGCATTTCATGAACCCCGTCCCCGTGCAAAA
GGGCGTAGAGATCATCGCAGGCTTGCAGACTTCCCAGGCCACGAAAGATA
CCGCCATCGCTTTCGTCCAGCGCATGGGCAAAGTCGCTTCTGTTTCTGCG
GATTCGCCTGGTTTCCTGGCGAACCGAATCCTCATGCCGTATATAAATGA
GGCCATCATCTGTCTGGAGACGGGCGTTGGTGGCCGTGAGGATATTGATA
ATATCATGAAGACGGGCACAAATGTGCCTATGGGTCCGTTGGTGTTGGCG
GATTTTATTGGTCTGGATACTTGTCTCGCCATTATGAATGTCTTGCACCA
GGAGACTGGTGATAGTAAGTATCGGCCGTCCGGGCTATTGAAGCGTATGG
TTGATGCTGGGTGGCTGGGCAAGAAGTCTGGAAAGGGTTTCTATGATTAC
TGA back to topCoding sequence (CDS) from alignment at An14:109616..110718- >CBS51388_008587-T1 ID=CBS51388_008587-T1|Name=CBS51388_008587-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2880bp|location=Sequence derived from alignment at An14:109616..110718- (Aspergillus niger CBS 513.88)
ACAAACTCCTCGATAAAGATGTATCAAAAGAACGCCTCACCCGGGACGCC
GCCGATGCCGCCCGGGCACGCATCACCCCAAGCCTGAAAATGGACGACCT
CTCCAGCGTCGACTTCGTCATCGAAGCCGTCCCCGAGATCCCCGACCTCA
AGACCTCTATCTTCTCAAAACTCGCCCAAATTGCCCCTAAGCACGCCATC
CTCGCTACTAACACCTCCTCCATCTCCATCACCAAGATCGCAGCCGCCAC
CACAACAGACCCCACGGACCTGCAGGCCCCCTCGCGTGTCATCTCCACGC
ATTTCATGAACCCCGTCCCCGTGCAAAAGGGCGTAGAGATCATCGCAGGC
TTGCAGACTTCCCAGGCCACGAAAGATACCGCCATCGCTTTCGTCCAGCG
CATGGGCAAAGTCGCTTCTGTTTCTGCGGATTCGCCTGGTTTCCTGGCGA
ACCGAATCCTCATGCCGTATATAAATGAGGCCATCATCTGTCTGGAGACG
GGCGTTGGTGGCCGTGAGGATATTGATAATATCATGAAGACGGGCACAAA
TGTGCCTATGGGTCCGTTGGTGTTGGCGGATTTTATTGGTCTGGATACTT
GTCTCGCCATTATGAATGTCTTGCACCAGGAGACTGGTGATAGTAAGTAT
CGGCCGTCCGGGCTATTGAAGCGTATGGTTGATGCTGGGTGGCTGGGCAA
GAAGTCTGGAAAGGGTTTCTATGATTACTGAGGATTAGGAATTGCTCTAG
TAGCTGCCCAGAAAGCCCAAGTCCCGGTGACCCTAATCGACAACTCCCAA
GCATCCATCGACAAGGGCCTCAAGTTTGCCGATGCTATTTTCATCATTGC
GCTCTCTCTCTCACCGGGGCCCCTCACTGGCCTCGCGGGCCTTCAGCACC
TCCCCCGCCGTCCATGCCGCCGAGGTTAAGTCGCTGGGTGTGATAGGAGC
TGGGCAGATGACAAACTCCTCGATAAAGATGTATCAAAAGAACGCCTCAC
CCGGGACGCCGCCGATGCCGCCCGGGCACGCATCACCCCAAGCCTGAAAA
TGGACGACCTCTCCAGCGTCGACTTCGTCATCGAAGCCGTCCCCGAGATC
CCCGACCTCAAGACCTCTATCTTCTCAAAACTCGCCCAAATTGCCCCTAA
GCACGCCATCCTCGCTACTAACACCTCCTCCATCTCCATCACCAAGATCG
CAGCCGCCACCACAACAGACCCCACGGACCTGCAGGCCCCCTCGCGTGTC
ATCTCCACGCATTTCATGAACCCCGTCCCCGTGCAAAAGGGCGTAGAGAT
CATCGCAGGCTTGCAGACTTCCCAGGCCACGAAAGATACCGCCATCGCTT
TCGTCCAGCGCATGGGCAAAGTCGCTTCTGTTTCTGCGGATTCGCCTGGT
TTCCTGGCGAACCGAATCCTCATGCCGTATATAAATGAGGCCATCATCTG
TCTGGAGACGGGCGTTGGTGGCCGTGAGGATATTGATAATATCATGAAGA
CGGGCACAAATGTGCCTATGGGTCCGTTGGTGTTGGCGGATTTTATTGGT
CTGGATACTTGTCTCGCCATTATGAATGTCTTGCACCAGGAGACTGGTGA
TAGTAAGTATCGGCCGTCCGGGCTATTGAAGCGTATGGTTGATGCTGGGT
GGCTGGGCAAGAAGTCTGGAAAGGGTTTCTATGATTACTGAGGATTAGGA
ATTGCTCTAGTAGCTGCCCAGAAAGCCCAAGTCCCGGTGACCCTAATCGA
CAACTCCCAAGCATCCATCGACAAGGGCCTCAAGTTTGCCGATGCTATTT
TCATCATTGCGCTCTCTCTCTCACCGGGGCCCCTCACTGGCCTCGCGGGC
CTTCAGCACCTCCCCCGCCGTCCATGCCGCCGAGGTTAAGTCGCTGGGTG
TGATAGGAGCTGGGCAGATGACAAACTCCTCGATAAAGATGTATCAAAAG
AACGCCTCACCCGGGACGCCGCCGATGCCGCCCGGGCACGCATCACCCCA
AGCCTGAAAATGGACGACCTCTCCAGCGTCGACTTCGTCATCGAAGCCGT
CCCCGAGATCCCCGACCTCAAGACCTCTATCTTCTCAAAACTCGCCCAAA
TTGCCCCTAAGCACGCCATCCTCGCTACTAACACCTCCTCCATCTCCATC
ACCAAGATCGCAGCCGCCACCACAACAGACCCCACGGACCTGCAGGCCCC
CTCGCGTGTCATCTCCACGCATTTCATGAACCCCGTCCCCGTGCAAAAGG
GCGTAGAGATCATCGCAGGCTTGCAGACTTCCCAGGCCACGAAAGATACC
GCCATCGCTTTCGTCCAGCGCATGGGCAAAGTCGCTTCTGTTTCTGCGGA
TTCGCCTGGTTTCCTGGCGAACCGAATCCTCATGCCGTATATAAATGAGG
CCATCATCTGTCTGGAGACGGGCGTTGGTGGCCGTGAGGATATTGATAAT
ATCATGAAGACGGGCACAAATGTGCCTATGGGTCCGTTGGTGTTGGCGGA
TTTTATTGGTCTGGATACTTGTCTCGCCATTATGAATGTCTTGCACCAGG
AGACTGGTGATAGTAAGTATCGGCCGTCCGGGCTATTGAAGCGTATGGTT
GATGCTGGGTGGCTGGGCAAGAAGTCTGGAAAGGGTTTCTATGATTACTG
AGGATTAGGAATTGCTCTAGTAGCTGCCCAGAAAGCCCAAGTCCCGGTGA
CCCTAATCGACAACTCCCAAGCATCCATCGACAAGGGCCTCAAGTTTGCC
GATGCTATTTTCATCATTGCGCTCTCTCTCTCACCGGGGCCCCTCACTGG
CCTCGCGGGCCTTCAGCACCTCCCCCGCCGTCCATGCCGCCGAGGTTAAG
TCGCTGGGTGTGATAGGAGCTGGGCAGATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0070403 | NAD+ binding |
| GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity |
| GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006631 | fatty acid metabolic process |
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008927 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR006180 |
| DBxref | InterPro:IPR022694 |
| DBxref | InterPro:IPR006176 |
| DBxref | InterPro:IPR006108 |
| DBxref | PFAM:PF02737 |
| DBxref | PFAM:PF00725 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An14 | supercontig | An14:109616..110718 - |
|
