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Sequences
The following sequences are available for this feature:
mRNA from alignment at An14:121555..123116- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008591-T1 ID=CBS51388_008591-T1|Name=CBS51388_008591-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1562bp|location=Sequence derived from alignment at An14:121555..123116- (Aspergillus niger CBS 513.88) ATGGCTGCCGCACCATCTTCTCGTCCCTTTGAATACCTCGAAAGCCTTGC
TGGCACTGTCTTCTACAAACTTTACCAGCAGCCATCAACGGCTCTCGCCA
TTTTCAGGCGCATGCTGCCTGATCTGGGTATGTGTCGCATGTGCATTCAC
CACTCCGGTGCTTCATCAACTAACTGCCTGACTAGCAAAATGCTTTGTCA
TGGCACTTCTCTACCTAAAGGATCCGCTCCCCGCGGCGGATCTGGAGGCT
TGGGTTAAATCGGAGAGCTTGAAGTAAGTGCGGGTCAAGCACCCTGGGAA
GGTTTCCGCAGTGATTGTGGTTAACGTGAGCCTCACACAGAGAACGCGAC
AATGCACTCTCCATCCTAGGAAGACTGCATATTTTATCCAACACTGTTAC
GGCGGATAATGTCCGCGCCTACAAAGTCACCGATCCCTTCGCCACTTCAT
TGCGACACGCTCTCACCGGCGCCGACCAAACACAATCTTTTGGCGTCCTT
TCACAAGTGCCTGCTGGCTCGGAAGTCTCGATCCCCGAACTTGATGAGTA
TGCGCGACGACAGTGGGAAGGAGTGCTGGGATACATGGTCGGTACTGGAG
GCATGGGAGGTCCCCAAGTGACCCTCAGCAAAGGCGTGAAGGAGCTCCTG
CAGGCGGGTCATCTGGTCGAGATCCGAGATCGTCGCGTCGAAATCACCCA
GGATGGGTTTGCCTTTGTCCTGCAAGATGTCAGCACGCAGGTGTGGCATA
TCTTGATTCTTTACGTCGAGAGCGCCAGCGCCATCAAGATGGACAGTGTC
GAAGTCCTCTCGTTCGTGTTCCTTCTCAGCAGTCTCGAACTCGGAAAATC
ATATGAAAAGAACCACCTCAGTTCGAAACAACTGCGCATGCTGACCGACC
TTGCCGACTTTGGTATCGTCTATCAAGAATCGCCGGATGCACCGCGTTTC
TACCCCACCCGTCTTGCAACCACCCTCACGTCCGACTCCAGCGCCTTGAG
CAACCCACTCTTGGGTTCCCTCTCCGGTCCTGCTGGCGAAGCCTCCAGCA
AAGCGGGTACGGGCTTCATCATTATCGAAACCAACTACCGTGTATACGCA
TACACCTCGTCTCCCCTACAGATCTCCCTGATTGCTCTGTTCACCACACT
GAAATACCGCTTCCCCAACCTCATCACCGGCAAAATCACCCGCCAATCCG
TCCGCCGGGCCGTCGAGATGGGCATCACCGCCGACCAAATCATTTCCTAT
CTCTCTACTCACGCCCACCCGCAAATGCGCAAGCACAACGTCTCCCGCTC
GACCTCAAACCAGGCCGGGATCCCCCCGTCAGTCCTCCCGCCAACCGTGG
TGGACCAGATTCGACTTTGGCAGCTGGAGCGGGACCGTGTCAAAGCTACG
TCCGGATTCCTTTTCAAGGACTTTGTCAGTCTGGCAGAATACGAGGCGCC
ATGTCGCTATGCCGAAGAAATCGGTGTTCTGGCATGGAAGTCGGATCGCA
AACGCATGTTCTTCGTGACGAGGCATGAACAAGTGGCTGCGTTCTTAAGG
AGCCGGAAATAA back to topCoding sequence (CDS) from alignment at An14:121555..123116- >CBS51388_008591-T1 ID=CBS51388_008591-T1|Name=CBS51388_008591-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4311bp|location=Sequence derived from alignment at An14:121555..123116- (Aspergillus niger CBS 513.88) AGAACGCGACAATGCACTCTCCATCCTAGGAAGACTGCATATTTTATCCA ACACTGTTACGGCGGATAATGTCCGCGCCTACAAAGTCACCGATCCCTTC GCCACTTCATTGCGACACGCTCTCACCGGCGCCGACCAAACACAATCTTT TGGCGTCCTTTCACAAGTGCCTGCTGGCTCGGAAGTCTCGATCCCCGAAC TTGATGAGTATGCGCGACGACAGTGGGAAGGAGTGCTGGGATACATGGTC GGTACTGGAGGCATGGGAGGTCCCCAAGTGACCCTCAGCAAAGGCGTGAA GGAGCTCCTGCAGGCGGGTCATCTGGTCGAGATCCGAGATCGTCGCGTCG AAATCACCCAGGATGGGTTTGCCTTTGTCCTGCAAGATGTCAGCACGCAG GTGTGGCATATCTTGATTCTTTACGTCGAGAGCGCCAGCGCCATCAAGAT GGACAGTGTCGAAGTCCTCTCGTTCGTGTTCCTTCTCAGCAGTCTCGAAC TCGGAAAATCATATGAAAAGAACCACCTCAGTTCGAAACAACTGCGCATG CTGACCGACCTTGCCGACTTTGGTATCGTCTATCAAGAATCGCCGGATGC ACCGCGTTTCTACCCCACCCGTCTTGCAACCACCCTCACGTCCGACTCCA GCGCCTTGAGCAACCCACTCTTGGGTTCCCTCTCCGGTCCTGCTGGCGAA GCCTCCAGCAAAGCGGGTACGGGCTTCATCATTATCGAAACCAACTACCG TGTATACGCATACACCTCGTCTCCCCTACAGATCTCCCTGATTGCTCTGT TCACCACACTGAAATACCGCTTCCCCAACCTCATCACCGGCAAAATCACC CGCCAATCCGTCCGCCGGGCCGTCGAGATGGGCATCACCGCCGACCAAAT CATTTCCTATCTCTCTACTCACGCCCACCCGCAAATGCGCAAGCACAACG TCTCCCGCTCGACCTCAAACCAGGCCGGGATCCCCCCGTCAGTCCTCCCG CCAACCGTGGTGGACCAGATTCGACTTTGGCAGCTGGAGCGGGACCGTGT CAAAGCTACGTCCGGATTCCTTTTCAAGGACTTTGTCAGTCTGGCAGAAT ACGAGGCGCCATGTCGCTATGCCGAAGAAATCGGTGTTCTGGCATGGAAG TCGGATCGCAAACGCATGTTCTTCGTGACGAGGCATGAACAAGTGGCTGC GTTCTTAAGGAGCCGGAAATAACAAAATGCTTTGTCATGGCACTTCTCTA CCTAAAGGATCCGCTCCCCGCGGCGGATCTGGAGGCTTGGGTTAAATCGG AGAGCTTGAAATGGCTGCCGCACCATCTTCTCGTCCCTTTGAATACCTCG AAAGCCTTGCTGGCACTGTCTTCTACAAACTTTACCAGCAGCCATCAACG GCTCTCGCCATTTTCAGGCGCATGCTGCCTGATCTGGAGAACGCGACAAT GCACTCTCCATCCTAGGAAGACTGCATATTTTATCCAACACTGTTACGGC GGATAATGTCCGCGCCTACAAAGTCACCGATCCCTTCGCCACTTCATTGC GACACGCTCTCACCGGCGCCGACCAAACACAATCTTTTGGCGTCCTTTCA CAAGTGCCTGCTGGCTCGGAAGTCTCGATCCCCGAACTTGATGAGTATGC GCGACGACAGTGGGAAGGAGTGCTGGGATACATGGTCGGTACTGGAGGCA TGGGAGGTCCCCAAGTGACCCTCAGCAAAGGCGTGAAGGAGCTCCTGCAG GCGGGTCATCTGGTCGAGATCCGAGATCGTCGCGTCGAAATCACCCAGGA TGGGTTTGCCTTTGTCCTGCAAGATGTCAGCACGCAGGTGTGGCATATCT TGATTCTTTACGTCGAGAGCGCCAGCGCCATCAAGATGGACAGTGTCGAA GTCCTCTCGTTCGTGTTCCTTCTCAGCAGTCTCGAACTCGGAAAATCATA TGAAAAGAACCACCTCAGTTCGAAACAACTGCGCATGCTGACCGACCTTG CCGACTTTGGTATCGTCTATCAAGAATCGCCGGATGCACCGCGTTTCTAC CCCACCCGTCTTGCAACCACCCTCACGTCCGACTCCAGCGCCTTGAGCAA CCCACTCTTGGGTTCCCTCTCCGGTCCTGCTGGCGAAGCCTCCAGCAAAG CGGGTACGGGCTTCATCATTATCGAAACCAACTACCGTGTATACGCATAC ACCTCGTCTCCCCTACAGATCTCCCTGATTGCTCTGTTCACCACACTGAA ATACCGCTTCCCCAACCTCATCACCGGCAAAATCACCCGCCAATCCGTCC GCCGGGCCGTCGAGATGGGCATCACCGCCGACCAAATCATTTCCTATCTC TCTACTCACGCCCACCCGCAAATGCGCAAGCACAACGTCTCCCGCTCGAC CTCAAACCAGGCCGGGATCCCCCCGTCAGTCCTCCCGCCAACCGTGGTGG ACCAGATTCGACTTTGGCAGCTGGAGCGGGACCGTGTCAAAGCTACGTCC GGATTCCTTTTCAAGGACTTTGTCAGTCTGGCAGAATACGAGGCGCCATG TCGCTATGCCGAAGAAATCGGTGTTCTGGCATGGAAGTCGGATCGCAAAC GCATGTTCTTCGTGACGAGGCATGAACAAGTGGCTGCGTTCTTAAGGAGC CGGAAATAACAAAATGCTTTGTCATGGCACTTCTCTACCTAAAGGATCCG CTCCCCGCGGCGGATCTGGAGGCTTGGGTTAAATCGGAGAGCTTGAAATG GCTGCCGCACCATCTTCTCGTCCCTTTGAATACCTCGAAAGCCTTGCTGG CACTGTCTTCTACAAACTTTACCAGCAGCCATCAACGGCTCTCGCCATTT TCAGGCGCATGCTGCCTGATCTGGAGAACGCGACAATGCACTCTCCATCC TAGGAAGACTGCATATTTTATCCAACACTGTTACGGCGGATAATGTCCGC GCCTACAAAGTCACCGATCCCTTCGCCACTTCATTGCGACACGCTCTCAC CGGCGCCGACCAAACACAATCTTTTGGCGTCCTTTCACAAGTGCCTGCTG GCTCGGAAGTCTCGATCCCCGAACTTGATGAGTATGCGCGACGACAGTGG GAAGGAGTGCTGGGATACATGGTCGGTACTGGAGGCATGGGAGGTCCCCA AGTGACCCTCAGCAAAGGCGTGAAGGAGCTCCTGCAGGCGGGTCATCTGG TCGAGATCCGAGATCGTCGCGTCGAAATCACCCAGGATGGGTTTGCCTTT GTCCTGCAAGATGTCAGCACGCAGGTGTGGCATATCTTGATTCTTTACGT CGAGAGCGCCAGCGCCATCAAGATGGACAGTGTCGAAGTCCTCTCGTTCG TGTTCCTTCTCAGCAGTCTCGAACTCGGAAAATCATATGAAAAGAACCAC CTCAGTTCGAAACAACTGCGCATGCTGACCGACCTTGCCGACTTTGGTAT CGTCTATCAAGAATCGCCGGATGCACCGCGTTTCTACCCCACCCGTCTTG CAACCACCCTCACGTCCGACTCCAGCGCCTTGAGCAACCCACTCTTGGGT TCCCTCTCCGGTCCTGCTGGCGAAGCCTCCAGCAAAGCGGGTACGGGCTT CATCATTATCGAAACCAACTACCGTGTATACGCATACACCTCGTCTCCCC TACAGATCTCCCTGATTGCTCTGTTCACCACACTGAAATACCGCTTCCCC AACCTCATCACCGGCAAAATCACCCGCCAATCCGTCCGCCGGGCCGTCGA GATGGGCATCACCGCCGACCAAATCATTTCCTATCTCTCTACTCACGCCC ACCCGCAAATGCGCAAGCACAACGTCTCCCGCTCGACCTCAAACCAGGCC GGGATCCCCCCGTCAGTCCTCCCGCCAACCGTGGTGGACCAGATTCGACT TTGGCAGCTGGAGCGGGACCGTGTCAAAGCTACGTCCGGATTCCTTTTCA AGGACTTTGTCAGTCTGGCAGAATACGAGGCGCCATGTCGCTATGCCGAA GAAATCGGTGTTCTGGCATGGAAGTCGGATCGCAAACGCATGTTCTTCGT GACGAGGCATGAACAAGTGGCTGCGTTCTTAAGGAGCCGGAAATAACAAA ATGCTTTGTCATGGCACTTCTCTACCTAAAGGATCCGCTCCCCGCGGCGG ATCTGGAGGCTTGGGTTAAATCGGAGAGCTTGAAATGGCTGCCGCACCAT CTTCTCGTCCCTTTGAATACCTCGAAAGCCTTGCTGGCACTGTCTTCTAC AAACTTTACCAGCAGCCATCAACGGCTCTCGCCATTTTCAGGCGCATGCT GCCTGATCTGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0000439 | transcription factor TFIIH core complex |
Vocabulary: Molecular Function
Term | Definition |
GO:0001671 | ATPase activator activity |
Vocabulary: Biological Process
Term | Definition |
GO:0006289 | nucleotide-excision repair |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | BUSCO:EOG09261QR8 |
DBxref | InterPro:IPR004598 |
DBxref | InterPro:IPR040662 |
DBxref | PFAM:PF18307 |
DBxref | PFAM:PF03849 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
An14 | supercontig | An14:121555..123116 - |
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