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CBS51388_008673-T1, CBS51388_008673-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008673-T1
Unique NameCBS51388_008673-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:367711..368617+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008673-T1 ID=CBS51388_008673-T1|Name=CBS51388_008673-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=907bp|location=Sequence derived from alignment at An14:367711..368617+ (Aspergillus niger CBS 513.88)
ATGGAGAAACAGTTTCTTTCTGCCTTCCACAGGGTTTTCGATCTTGTTGA
GACCCACGACCCTAACCTGTCACCTTCTGACTATGTTATCCTGAGACAAA
TATTTCTTGTCCTCTCTATTACAGCGTGGCAGAATCGCTCACCCACGGAG
TGCAATTCATACTACCTCAATGCCTTGGAATGTTCCCGGTTAACAACCGC
ATCCGAAAACGAGGGCCTTGCAGGACTTCAGTCCCTGCTTTTGACTTGTC
TATATCTTCAGCTCACACGGAAACATGAGGAATGGATTCAGACAGCTGGT
CAGGCTGTTCGTCTCGCGCAATCTCTAGGACTCCATCGGCATTCTAGGCG
TTTCCGCTTTTGCGCTGGGGAAATGGAATTAAGAAAACGGATGTGGTGGT
GCGTTTACGCAGTGGACGTGTAAGTTTTCTGTCAAACAAATTGCTCTCTC
CAAACCTCTAATTCCCGAAAAGCGCGTGCAGCGTAGTACATGGCTTGCCG
AAGCTGATCCAAGACGATGACGTGGATACCGACCTGCCTATTGACACGGA
TCTCGACGATGTGACTGCCTCTGACATACCGCTCCCGCTACCGGGAGAGA
CAACAAGCATGGCTACCTTTATCCTTTACGTCAAGCTGCTCAGACTTTTC
TCTAGCTGCCTCAAGTCGCTATATACCACTACTAAGCGGCGAAATGGTGT
CGCCAAAATTACCGCATTGGACCACGAGCTCTCGGTGTGGCACCATAGCG
TAGTCCGATTCCAAGGCAGTGGGATGAAAGAGAACGACGATGCTCTACCG
GACACCCTTCACATCAATTCATCAGGTCAATCGTTCGAGACACTGTTTCT
ACACTTCTTAGGAAACGTGGCTGTTGTGCTAATTCACCAGCCAGCATTGA
CATTTGA
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Coding sequence (CDS) from alignment at An14:367711..368617+

>CBS51388_008673-T1 ID=CBS51388_008673-T1|Name=CBS51388_008673-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2367bp|location=Sequence derived from alignment at An14:367711..368617+ (Aspergillus niger CBS 513.88)
ATGGAGAAACAGTTTCTTTCTGCCTTCCACAGGGTTTTCGATCTTGTTGA
GACCCACGACCCTAACCTGTCACCTTCTGACTATGTTATCCTGAGACAAA
TATTTCTTGTCCTCTCTATTACAGCGTGGCAGAATCGCTCACCCACGGAG
TGCAATTCATACTACCTCAATGCCTTGGAATGTTCCCGGTTAACAACCGC
ATCCGAAAACGAGGGCCTTGCAGGACTTCAGTCCCTGCTTTTGACTTGTC
TATATCTTCAGCTCACACGGAAACATGAGGAATGGATTCAGACAGCTGGT
CAGGCTGTTCGTCTCGCGCAATCTCTAGGACTCCATCGGCATTCTAGGCG
TTTCCGCTTTTGCGCTGGGGAAATGGAATTAAGAAAACGGATGTGGTGGT
GCGTTTACGCAGTGGACGTCGCGTGCAGCGTAGTACATGGCTTGCCGAAG
CTGATCCAAGACGATGACGTGGATACCGACCTGCCTATTGACACGGATCT
CGACGATGTGACTGCCTCTGACATACCGCTCCCGCTACCGGGAGAGACAA
CAAGCATGGCTACCTTTATCCTTTACGTCAAGCTGCTCAGACTTTTCTCT
AGCTGCCTCAAGTCGCTATATACCACTACTAAGCGGCGAAATGGTGTCGC
CAAAATTACCGCATTGGACCACGAGCTCTCGGTGTGGCACCATAGCGTAG
TCCGATTCCAAGGCAGTGGGATGAAAGAGAACGACGATGCTCTACCGGAC
ACCCTTCACATCAATTCATCAGCCAGCATTGACATTTGAATGGAGAAACA
GTTTCTTTCTGCCTTCCACAGGGTTTTCGATCTTGTTGAGACCCACGACC
CTAACCTGTCACCTTCTGACTATGTTATCCTGAGACAAATATTTCTTGTC
CTCTCTATTACAGCGTGGCAGAATCGCTCACCCACGGAGTGCAATTCATA
CTACCTCAATGCCTTGGAATGTTCCCGGTTAACAACCGCATCCGAAAACG
AGGGCCTTGCAGGACTTCAGTCCCTGCTTTTGACTTGTCTATATCTTCAG
CTCACACGGAAACATGAGGAATGGATTCAGACAGCTGGTCAGGCTGTTCG
TCTCGCGCAATCTCTAGGACTCCATCGGCATTCTAGGCGTTTCCGCTTTT
GCGCTGGGGAAATGGAATTAAGAAAACGGATGTGGTGGTGCGTTTACGCA
GTGGACGTCGCGTGCAGCGTAGTACATGGCTTGCCGAAGCTGATCCAAGA
CGATGACGTGGATACCGACCTGCCTATTGACACGGATCTCGACGATGTGA
CTGCCTCTGACATACCGCTCCCGCTACCGGGAGAGACAACAAGCATGGCT
ACCTTTATCCTTTACGTCAAGCTGCTCAGACTTTTCTCTAGCTGCCTCAA
GTCGCTATATACCACTACTAAGCGGCGAAATGGTGTCGCCAAAATTACCG
CATTGGACCACGAGCTCTCGGTGTGGCACCATAGCGTAGTCCGATTCCAA
GGCAGTGGGATGAAAGAGAACGACGATGCTCTACCGGACACCCTTCACAT
CAATTCATCAGCCAGCATTGACATTTGAATGGAGAAACAGTTTCTTTCTG
CCTTCCACAGGGTTTTCGATCTTGTTGAGACCCACGACCCTAACCTGTCA
CCTTCTGACTATGTTATCCTGAGACAAATATTTCTTGTCCTCTCTATTAC
AGCGTGGCAGAATCGCTCACCCACGGAGTGCAATTCATACTACCTCAATG
CCTTGGAATGTTCCCGGTTAACAACCGCATCCGAAAACGAGGGCCTTGCA
GGACTTCAGTCCCTGCTTTTGACTTGTCTATATCTTCAGCTCACACGGAA
ACATGAGGAATGGATTCAGACAGCTGGTCAGGCTGTTCGTCTCGCGCAAT
CTCTAGGACTCCATCGGCATTCTAGGCGTTTCCGCTTTTGCGCTGGGGAA
ATGGAATTAAGAAAACGGATGTGGTGGTGCGTTTACGCAGTGGACGTCGC
GTGCAGCGTAGTACATGGCTTGCCGAAGCTGATCCAAGACGATGACGTGG
ATACCGACCTGCCTATTGACACGGATCTCGACGATGTGACTGCCTCTGAC
ATACCGCTCCCGCTACCGGGAGAGACAACAAGCATGGCTACCTTTATCCT
TTACGTCAAGCTGCTCAGACTTTTCTCTAGCTGCCTCAAGTCGCTATATA
CCACTACTAAGCGGCGAAATGGTGTCGCCAAAATTACCGCATTGGACCAC
GAGCTCTCGGTGTGGCACCATAGCGTAGTCCGATTCCAAGGCAGTGGGAT
GAAAGAGAACGACGATGCTCTACCGGACACCCTTCACATCAATTCATCAG
CCAGCATTGACATTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008673CBS51388_008673Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008673-T1.exon1CBS51388_008673-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_008673-T1.exon2CBS51388_008673-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008673-T1.exon3CBS51388_008673-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008673-T1.cdsCBS51388_008673-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008673-T1CBS51388_008673-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007219
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:367711..368617 +
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