You are here

Home

CBS51388_008675-T1, CBS51388_008675-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008675-T1
Unique NameCBS51388_008675-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:371636..372799-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008675-T1 ID=CBS51388_008675-T1|Name=CBS51388_008675-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1164bp|location=Sequence derived from alignment at An14:371636..372799- (Aspergillus niger CBS 513.88)
ATGGAGAAGCCCCGATCAGATGCATGGATTGAGGCGATGGAGCGTTTCCG
AGGCTCCTTGATTCGCATGCATGATAAAAGTATGCTGAGTAACACCAAGC
GAGTTAAGGTATGTTGCTGGATGGAAAGAAAACCCTTACTCAGGTTTGCT
TGTACACGTGCTAACCAGGGGCAGGTGGCATTGATTGATGACGGAATTGA
CCTTCAAGACTTCAACACTTATAGATTTGCCCAATGTACGGGCGTGAGTT
ACTGTTCGAGCGATATAAGTAACGGGGACCCGTGGTGGAAATCCACTAAT
GGGCATGGTACCATCATGGCTAACATGATCAGCCGAATCAATCCGTGGGT
TCAGCTTGAAGTGATCAAAGTCCAGAGCAGCCCTTCCTACGTCCATGGCG
ATGGAGCACGCAGCATGAGCCCTCGAAGTGCCGCCGATGCCATCAACGCG
GCAGTAGTGCGTGGTGCCGATATCATCTCTATGTCGTGGACTATAACAGA
CGTAGGGTTTCGTATGTCTGTGTTATCAGACAGTGCGTCCAATGTGGATG
GCGACAAAAGGCGAGCGGATGAGAATGATCTGAAGCTCCTCCAGAGTGCA
ATTGACGACGCTGTTAAAGGAGATAAACGACTCCTGATTTGCTCCGCCGC
GGATGATGTCCGGCTCAATGGGGACAATACTTTTCCCTATAGCCAGGCTC
CGGAACTCATTCTTCGCATGGGTTCGACGGGGCCTCAGGCGAATCGAGAC
CTGGGATCAGGTAGTGGAGGCTCTATAACATACTACCTGCCAGGTAACCA
GGTTGCCGAGGATCGGAGGCCTCATTCTGCAAAGCCCGTTGTTTATCATA
ACGGATCCTCTGTCTCGACGGCACTTGCTGCGGGCCTCGCATCATTGATC
ATGTATTGTTGTCACTGCCTCCACTCGTGCCAGGCTGGTGCTGAGTATGA
AAATTGCGCGAAAGCACTACGGAGTCATGCAAACATGCGTAAGGCTTTTA
ATAGCATTAACAGGTATTTCGAGTGGAAAGACGATGAGAAAATCGTTCCA
GTCTGGGGCCCTTTCGGTGACAAGAGCAGTATGCTGGATAAAGCAACTAA
CAGCGAAGACAAGATCAAAGTGCTGAAAGAACTGGTTGCGTGCTTATGCC
TGGATATCAAGTGA
back to top

Coding sequence (CDS) from alignment at An14:371636..372799-

>CBS51388_008675-T1 ID=CBS51388_008675-T1|Name=CBS51388_008675-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2196bp|location=Sequence derived from alignment at An14:371636..372799- (Aspergillus niger CBS 513.88)
GTGGCATTGATTGATGACGGAATTGACCTTCAAGACTTCAACACTTATAG
ATTTGCCCAATGTACGGGCGTGAGTTACTGTTCGAGCGATATAAGTAACG
GGGACCCGTGGTGGAAATCCACTAATGGGCATGGTACCATCATGGCTAAC
ATGATCAGCCGAATCAATCCGTGGGTTCAGCTTGAAGTGATCAAAGTCCA
GAGCAGCCCTTCCTACGTCCATGGCGATGGAGCACGCAGCATGAGCCCTC
GAAGTGCCGCCGATGCCATCAACGCGGCAGTAGTGCGTGGTGCCGATATC
ATCTCTATGTCGTGGACTATAACAGACGTAGGGTTTCGTATGTCTGTGTT
ATCAGACAGTGCGTCCAATGTGGATGGCGACAAAAGGCGAGCGGATGAGA
ATGATCTGAAGCTCCTCCAGAGTGCAATTGACGACGCTGTTAAAGGAGAT
AAACGACTCCTGATTTGCTCCGCCGCGGATGATGTCCGGCTCAATGGGGA
CAATACTTTTCCCTATAGCCAGGCTCCGGAACTCATTCTTCGCATGGGTT
CGACGGGGCCTCAGGCGAATCGAGACCTGGGATCAGGTAGTGGAGGCTCT
ATAACATACTACCTGCCAGGTAACCAGGTTGCCGAGGATCGGAGGCCTCA
TTCTGCAAAGCCCGTTGTTTATCATAACGGATCCTCTGTCTCGACGGCAC
TTGCTGCGGGCCTCGCATCATTGATCATGTATTGTTGTCACTGCCTCCAC
TCGTGCCAGGCTGGTGCTGAGTATGAAAATTGCGCGAAAGCACTACGGAG
TCATGCAAACATGCGTAAGGCTTTTAATAGCATTAACAGGTATTTCGAGT
GGAAAGACGATGAGAAAATCGTTCCAGTCTGGGGCCCTTTCGGTGACAAG
AGCAGTATGCTGGATAAAGCAACTAACAGCGAAGACAAGATCAAAGTGCT
GAAAGAACTGGTTGCGTGCTTATGCCTGGATATCAAGTGAATGGAGAAGC
CCCGATCAGATGCATGGATTGAGGCGATGGAGCGTTTCCGAGGCTCCTTG
ATTCGCATGCATGATAAAAGTATGCTGAGTAACACCAAGCGAGTTAAGGT
GGCATTGATTGATGACGGAATTGACCTTCAAGACTTCAACACTTATAGAT
TTGCCCAATGTACGGGCGTGAGTTACTGTTCGAGCGATATAAGTAACGGG
GACCCGTGGTGGAAATCCACTAATGGGCATGGTACCATCATGGCTAACAT
GATCAGCCGAATCAATCCGTGGGTTCAGCTTGAAGTGATCAAAGTCCAGA
GCAGCCCTTCCTACGTCCATGGCGATGGAGCACGCAGCATGAGCCCTCGA
AGTGCCGCCGATGCCATCAACGCGGCAGTAGTGCGTGGTGCCGATATCAT
CTCTATGTCGTGGACTATAACAGACGTAGGGTTTCGTATGTCTGTGTTAT
CAGACAGTGCGTCCAATGTGGATGGCGACAAAAGGCGAGCGGATGAGAAT
GATCTGAAGCTCCTCCAGAGTGCAATTGACGACGCTGTTAAAGGAGATAA
ACGACTCCTGATTTGCTCCGCCGCGGATGATGTCCGGCTCAATGGGGACA
ATACTTTTCCCTATAGCCAGGCTCCGGAACTCATTCTTCGCATGGGTTCG
ACGGGGCCTCAGGCGAATCGAGACCTGGGATCAGGTAGTGGAGGCTCTAT
AACATACTACCTGCCAGGTAACCAGGTTGCCGAGGATCGGAGGCCTCATT
CTGCAAAGCCCGTTGTTTATCATAACGGATCCTCTGTCTCGACGGCACTT
GCTGCGGGCCTCGCATCATTGATCATGTATTGTTGTCACTGCCTCCACTC
GTGCCAGGCTGGTGCTGAGTATGAAAATTGCGCGAAAGCACTACGGAGTC
ATGCAAACATGCGTAAGGCTTTTAATAGCATTAACAGGTATTTCGAGTGG
AAAGACGATGAGAAAATCGTTCCAGTCTGGGGCCCTTTCGGTGACAAGAG
CAGTATGCTGGATAAAGCAACTAACAGCGAAGACAAGATCAAAGTGCTGA
AAGAACTGGTTGCGTGCTTATGCCTGGATATCAAGTGAATGGAGAAGCCC
CGATCAGATGCATGGATTGAGGCGATGGAGCGTTTCCGAGGCTCCTTGAT
TCGCATGCATGATAAAAGTATGCTGAGTAACACCAAGCGAGTTAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008675CBS51388_008675Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008675-T1CBS51388_008675-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008675-T1.cdsCBS51388_008675-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008675-T1.exon2CBS51388_008675-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008675-T1.exon1CBS51388_008675-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR023827
DBxrefInterPro:IPR036852
DBxrefInterPro:IPR000209
DBxrefInterPro:IPR015500
DBxrefPFAM:PF00082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:371636..372799 -
Powered by Drupal