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CBS51388_008694-T1, CBS51388_008694-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008694-T1
Unique NameCBS51388_008694-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:410903..412113-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008694-T1 ID=CBS51388_008694-T1|Name=CBS51388_008694-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1211bp|location=Sequence derived from alignment at An14:410903..412113- (Aspergillus niger CBS 513.88)
ATGCCTCCTCCACAGATCAAGCAGGATCTGAACCGGTCCGGATGGGAGAC
CACTGACTTCCCCTCCGTGTGCGAGAACTGCCTGCCCGACAATCCTTACG
TTCAGATGCTCAAGGAAGACCATGGCGCAGAATGCAAGATTGTAGGCAAC
CCTATCCTCAATCACACAAACATATGACACTAACAGATACCCAGTGCACG
CGTCCTTTCACCATCTTCCGCTGGAAAGCCGACCGCACCGCGCGCCAGAA
GCGTACTGCCATCTGCTTGACCTGCGCGCGGTTGAAGAACTGCTGTCAAT
GCTGTATGCTGGATCTGTCCTTCGGGCTGCCGATCGTCGTTCGTGATGCT
GCTTTGAAGATGGTCGCTCCAGGTCCCGAAAGCACCATCAACCGCGAATA
CTACGCACAAGGTCACGAGAAGGAGATCGAAGAGGGGCGTGGCGCGGTGG
AGGAATACGAGAAGACGGACGAGAAAGCTCGGGAGCTGCTTCGGAGACTC
GCCAACAGTGAACCCTACTACAGGAAGCCCCGCCAGATAGAGGCCGCACC
CCAAGACGAGGAGGGCGCGAGTGCAGGGCCCAGCGACGCACCGGTTGTAC
ACAGCCGTTACGGGAATGGTCCGGGGCCCATTCGGACGAGCGAAAGCAGG
AGGGGAACGCCACTTCCGGGTAGAGGACGAGGAGGTATGCGTGGTGGTCG
TGGTGGCCGACCATTCCCTAGCGCCGCTCAGGTCCCCCCATCGGCAGAAG
ATATCCTACCGCCCGCGGACCCGAATATCACATCGCTCTTTGTTACTGGT
GTCGAGGACGATCTTCCAGAACACACGCTGCGGACTTTCTTCACACAGTT
TGGACAGTTGCGGTCGCTCATTTGCTCCCACCGTGCTCACTCTGCATTCG
TCAACTTCGCCACTCGGGAAGGTGCTGAGGCGGCTGCCAAGCAGTGCCAG
GGTCGGGCTGTCATCCAGGGCTGCCCTCTGCGCGTTCGCTGGGGTAAGCC
CAAGCCGTTGGATAACATGGATCGGGAGGAACGCTTGAAGAATGCGCGGG
AAGGTCGGCAGGCGGCAGGCCCGCGGGGAGCCGATTCTGGAAAGAAGGCC
ATCACAGCTGCCGGAGAGGAGATTGGCAAAGAGCAAAAACAACGGAGTTA
TGCTGTCGCCCCACCCCCGGGCGCTGGAGAGGTCCAGTACTCCAGTTTGT
CTGGTGATTGA
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Coding sequence (CDS) from alignment at An14:410903..412113-

>CBS51388_008694-T1 ID=CBS51388_008694-T1|Name=CBS51388_008694-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2316bp|location=Sequence derived from alignment at An14:410903..412113- (Aspergillus niger CBS 513.88)
TGCACGCGTCCTTTCACCATCTTCCGCTGGAAAGCCGACCGCACCGCGCG
CCAGAAGCGTACTGCCATCTGCTTGACCTGCGCGCGGTTGAAGAACTGCT
GTCAATGCTGTATGCTGGATCTGTCCTTCGGGCTGCCGATCGTCGTTCGT
GATGCTGCTTTGAAGATGGTCGCTCCAGGTCCCGAAAGCACCATCAACCG
CGAATACTACGCACAAGGTCACGAGAAGGAGATCGAAGAGGGGCGTGGCG
CGGTGGAGGAATACGAGAAGACGGACGAGAAAGCTCGGGAGCTGCTTCGG
AGACTCGCCAACAGTGAACCCTACTACAGGAAGCCCCGCCAGATAGAGGC
CGCACCCCAAGACGAGGAGGGCGCGAGTGCAGGGCCCAGCGACGCACCGG
TTGTACACAGCCGTTACGGGAATGGTCCGGGGCCCATTCGGACGAGCGAA
AGCAGGAGGGGAACGCCACTTCCGGGTAGAGGACGAGGAGGTATGCGTGG
TGGTCGTGGTGGCCGACCATTCCCTAGCGCCGCTCAGGTCCCCCCATCGG
CAGAAGATATCCTACCGCCCGCGGACCCGAATATCACATCGCTCTTTGTT
ACTGGTGTCGAGGACGATCTTCCAGAACACACGCTGCGGACTTTCTTCAC
ACAGTTTGGACAGTTGCGGTCGCTCATTTGCTCCCACCGTGCTCACTCTG
CATTCGTCAACTTCGCCACTCGGGAAGGTGCTGAGGCGGCTGCCAAGCAG
TGCCAGGGTCGGGCTGTCATCCAGGGCTGCCCTCTGCGCGTTCGCTGGGG
TAAGCCCAAGCCGTTGGATAACATGGATCGGGAGGAACGCTTGAAGAATG
CGCGGGAAGGTCGGCAGGCGGCAGGCCCGCGGGGAGCCGATTCTGGAAAG
AAGGCCATCACAGCTGCCGGAGAGGAGATTGGCAAAGAGCAAAAACAACG
GAGTTATGCTGTCGCCCCACCCCCGGGCGCTGGAGAGGTCCAGTACTCCA
GTTTGTCTGGTGATTGAATGCCTCCTCCACAGATCAAGCAGGATCTGAAC
CGGTCCGGATGGGAGACCACTGACTTCCCCTCCGTGTGCGAGAACTGCCT
GCCCGACAATCCTTACGTTCAGATGCTCAAGGAAGACCATGGCGCAGAAT
GCAAGATTTGCACGCGTCCTTTCACCATCTTCCGCTGGAAAGCCGACCGC
ACCGCGCGCCAGAAGCGTACTGCCATCTGCTTGACCTGCGCGCGGTTGAA
GAACTGCTGTCAATGCTGTATGCTGGATCTGTCCTTCGGGCTGCCGATCG
TCGTTCGTGATGCTGCTTTGAAGATGGTCGCTCCAGGTCCCGAAAGCACC
ATCAACCGCGAATACTACGCACAAGGTCACGAGAAGGAGATCGAAGAGGG
GCGTGGCGCGGTGGAGGAATACGAGAAGACGGACGAGAAAGCTCGGGAGC
TGCTTCGGAGACTCGCCAACAGTGAACCCTACTACAGGAAGCCCCGCCAG
ATAGAGGCCGCACCCCAAGACGAGGAGGGCGCGAGTGCAGGGCCCAGCGA
CGCACCGGTTGTACACAGCCGTTACGGGAATGGTCCGGGGCCCATTCGGA
CGAGCGAAAGCAGGAGGGGAACGCCACTTCCGGGTAGAGGACGAGGAGGT
ATGCGTGGTGGTCGTGGTGGCCGACCATTCCCTAGCGCCGCTCAGGTCCC
CCCATCGGCAGAAGATATCCTACCGCCCGCGGACCCGAATATCACATCGC
TCTTTGTTACTGGTGTCGAGGACGATCTTCCAGAACACACGCTGCGGACT
TTCTTCACACAGTTTGGACAGTTGCGGTCGCTCATTTGCTCCCACCGTGC
TCACTCTGCATTCGTCAACTTCGCCACTCGGGAAGGTGCTGAGGCGGCTG
CCAAGCAGTGCCAGGGTCGGGCTGTCATCCAGGGCTGCCCTCTGCGCGTT
CGCTGGGGTAAGCCCAAGCCGTTGGATAACATGGATCGGGAGGAACGCTT
GAAGAATGCGCGGGAAGGTCGGCAGGCGGCAGGCCCGCGGGGAGCCGATT
CTGGAAAGAAGGCCATCACAGCTGCCGGAGAGGAGATTGGCAAAGAGCAA
AAACAACGGAGTTATGCTGTCGCCCCACCCCCGGGCGCTGGAGAGGTCCA
GTACTCCAGTTTGTCTGGTGATTGAATGCCTCCTCCACAGATCAAGCAGG
ATCTGAACCGGTCCGGATGGGAGACCACTGACTTCCCCTCCGTGTGCGAG
AACTGCCTGCCCGACAATCCTTACGTTCAGATGCTCAAGGAAGACCATGG
CGCAGAATGCAAGATT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SLT11CBS51388_008694Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008694-T1CBS51388_008694-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008694-T1.cdsCBS51388_008694-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008694-T1.exon2CBS51388_008694-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008694-T1.exon1CBS51388_008694-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09263BDA
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034356
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
ProductPre-mRNA-splicing factor slt11
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:410903..412113 -
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