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Sequences
The following sequences are available for this feature:
mRNA from alignment at An14:460487..461333+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008714-T1 ID=CBS51388_008714-T1|Name=CBS51388_008714-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=847bp|location=Sequence derived from alignment at An14:460487..461333+ (Aspergillus niger CBS 513.88)
ATGGCTACCGAGTCCCTCAAGATCGCTCTTATTTATGAGCTTCGCGAGGC
CTACAAGGCCCTCGGTTACTCAAATGCAGACTGCGACAGGTTCGAAGTCG
GAGAAGCAGCCGAGCACATAGCTGCAGCTCTCAAAAATTTGGGGCATGAG
GTTGTCCTTGTTCCAGACATCCATTCCCTGGTTAAGAGGCTAGCACATGG
CGAGGGTAGTACATGGGACTTGGCATTCAATACCACGGAGGGCCTACATG
GATTAGCTCGAGAAGGTCAAGTTCCCGCATTGTTGGAGGCCTACCAAATC
CCGTTCACATTTTCGGATGCGGCCACGATGACATTGTGTTTGGACAAGGG
CAGAACAAAGGTGGGTGTGCTTACAACCTTAGTCTAACATAGGCGTTCTT
TCAAGTCATTACCAGCTAACATACACTTGCTAGATGGTTCTTGAGCACTT
CAATGTTCCAACTGCTCCGTTTGCAGTGATCCACTTCGATCATACCGCTG
AGAAGACGCAGGTTTCATTGGACGAGATCCTGTCTATGATTCGCATGTCT
CGCCATTCCGAGACGCTGCTGAGTCAATATCCGTTGTTTGTGAAGCCTCT
TGCTGAAGGCTCTTCCAAAGGAATTGGAGCAACCAACAAAATCAAGAGTA
TTGAATCCCTATGTGATGTCGTCAACTCTCTTCGAGATTCCAGCCCCTCA
TCGCTTGGGGTTCTCGTCGAGAAGTATCTTCCGGGTCGAGAATTCACTGT
GGGCATCCTGGGAACGGGCGAGGATGCATGGGTGGTCGGTGTCGACGAGA
TATATGGTGCAGCAAAGAGTCGACGAATTCTAACCCCGAGTCAGTAG back to topCoding sequence (CDS) from alignment at An14:460487..461333+ >CBS51388_008714-T1 ID=CBS51388_008714-T1|Name=CBS51388_008714-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1548bp|location=Sequence derived from alignment at An14:460487..461333+ (Aspergillus niger CBS 513.88)
ATGGCTACCGAGTCCCTCAAGATCGCTCTTATTTATGAGCTTCGCGAGGC
CTACAAGGCCCTCGGTTACTCAAATGCAGACTGCGACAGGTTCGAAGTCG
GAGAAGCAGCCGAGCACATAGCTGCAGCTCTCAAAAATTTGGGGCATGAG
GTTGTCCTTGTTCCAGACATCCATTCCCTGGTTAAGAGGCTAGCACATGG
CGAGGGTAGTACATGGGACTTGGCATTCAATACCACGGAGGGCCTACATG
GATTAGCTCGAGAAGGTCAAGTTCCCGCATTGTTGGAGGCCTACCAAATC
CCGTTCACATTTTCGGATGCGGCCACGATGACATTGTGTTTGGACAAGGG
CAGAACAAAGATGGTTCTTGAGCACTTCAATGTTCCAACTGCTCCGTTTG
CAGTGATCCACTTCGATCATACCGCTGAGAAGACGCAGGTTTCATTGGAC
GAGATCCTGTCTATGATTCGCATGTCTCGCCATTCCGAGACGCTGCTGAG
TCAATATCCGTTGTTTGTGAAGCCTCTTGCTGAAGGCTCTTCCAAAGGAA
TTGGAGCAACCAACAAAATCAAGAGTATTGAATCCCTATGTGATGTCGTC
AACTCTCTTCGAGATTCCAGCCCCTCATCGCTTGGGGTTCTCGTCGAGAA
GTATCTTCCGGGTCGAGAATTCACTGTGGGCATCCTGGGAACGGGCGAGG
ATGCATGGGTGGTCGGTGTCGACGAGATATATGGTGCAGCAAAGAGTCGA
CGAATTCTAACCCCGAGTCAGTAGATGGCTACCGAGTCCCTCAAGATCGC
TCTTATTTATGAGCTTCGCGAGGCCTACAAGGCCCTCGGTTACTCAAATG
CAGACTGCGACAGGTTCGAAGTCGGAGAAGCAGCCGAGCACATAGCTGCA
GCTCTCAAAAATTTGGGGCATGAGGTTGTCCTTGTTCCAGACATCCATTC
CCTGGTTAAGAGGCTAGCACATGGCGAGGGTAGTACATGGGACTTGGCAT
TCAATACCACGGAGGGCCTACATGGATTAGCTCGAGAAGGTCAAGTTCCC
GCATTGTTGGAGGCCTACCAAATCCCGTTCACATTTTCGGATGCGGCCAC
GATGACATTGTGTTTGGACAAGGGCAGAACAAAGATGGTTCTTGAGCACT
TCAATGTTCCAACTGCTCCGTTTGCAGTGATCCACTTCGATCATACCGCT
GAGAAGACGCAGGTTTCATTGGACGAGATCCTGTCTATGATTCGCATGTC
TCGCCATTCCGAGACGCTGCTGAGTCAATATCCGTTGTTTGTGAAGCCTC
TTGCTGAAGGCTCTTCCAAAGGAATTGGAGCAACCAACAAAATCAAGAGT
ATTGAATCCCTATGTGATGTCGTCAACTCTCTTCGAGATTCCAGCCCCTC
ATCGCTTGGGGTTCTCGTCGAGAAGTATCTTCCGGGTCGAGAATTCACTG
TGGGCATCCTGGGAACGGGCGAGGATGCATGGGTGGTCGGTGTCGACGAG
ATATATGGTGCAGCAAAGAGTCGACGAATTCTAACCCCGAGTCAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
| GO:0005524 | ATP binding |
| GO:0008716 | D-alanine-D-alanine ligase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016185 |
| DBxref | InterPro:IPR011761 |
| DBxref | InterPro:IPR013815 |
| DBxref | InterPro:IPR011095 |
| DBxref | PFAM:PF07478 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An14 | supercontig | An14:460487..461333 + |
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