You are here

Home

CBS51388_008758-T1, CBS51388_008758-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008758-T1
Unique NameCBS51388_008758-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:598327..599981-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008758-T1 ID=CBS51388_008758-T1|Name=CBS51388_008758-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1655bp|location=Sequence derived from alignment at An14:598327..599981- (Aspergillus niger CBS 513.88)
ATGACTGAGGTGCGTGTTTGCTTTTGCGACAGCCGGTGACATTCCCAGAC
TTGTTTGGCTAATGATGCACGCGATGTCACAGCCAGTCTACAATTCCTCA
ACGCCGGAGGGTGGTGATCCTACCCAGGTCGACGTGAACGCGCAATACAC
CGGATTCGAATACAACTATGTCTATATTACTACATGCACATTCATCGTGT
TCCTTATCTTACCGGGGATTGGGATGCTCTACAGCGGCTTGTCCCGGAGG
AAATCCGCGCTGGCCCTTCTCTTCCAGGCCTTTATGGTTCTTGCAGTGTA
AGTTCGCCAGTCGCGACCCTTTTGATATTTAGCGCAACGCTAATCATGAT
ATAGATCTACATTTCAATGGTTGTTTTGGGGATATTCTCTTACCTATTCA
AGAGACGGTGGGCCCTTCATCGGTACACTGAAGAACTTTGGACTGATGGA
TGTCTTGGTGGCGCCCTCGCCCGGCTCCGCGGTCTTACCGGACGTCGTCT
TCTGTCTATTCCAGCTCCTATTTTGTGCATGCACAGTAAGTTTGTCCAGG
TGATACAAAAGCGATGTACTAAGGTTTTAGGTAATGATTGTCGTTGGAGG
TGCCTTTGAACGAGGTGGCATTGTACCTTCATTGATCTTCAGCTTCTTCT
GGGCGACCATAGTTTACTGCCCGCTAGCCCGGTGGACATGGAGCAGTAAC
GGATGGCTCTACAACCTACCGGCCATTGATTTTGCGGGAGGCGGCCCCGT
GCATATCGCGTCCGGGTGTACAGCTCTGGCGTATGCGTTGGTTTTGGGAA
AGCGTAGGGATCACGGGGACCCTTCACTGCGCAAGCCGCACAATACGACT
CTGGTCTTCCTCGGGACAGTATTGATCTGGACTGGATGGTTGGGGTTCAA
TGTACGTGAGGTCCTGTCTTCTCCAGTATTCGAGTCTAACAGCAATATGA
TGATAGGGGGGCTCGAGTCTGAACGCCAGCATGCGTGCCATGGTTGCTGT
TTTCAACACCAATACCGCCGGTTGCACAGGCATTCTCGGATGGGTTCTGG
TAGACATGATCCGGTACAAAGGAAAGTTCACAGTTGTTGGTGCGTGTGAA
GGTGCTATTGCTGGCTTGGTCGGGATCACGCCAGCGGCTGGTTGCGTCTC
GCTATGGCTCGCAGCATGCATCGGTTTCATTACCGCCATTGTATGCTCCT
CCCTCAAAAATGTGAACGAGTGGATCAATGTCGACGAGGGTATGGATGTG
TTCAAGCTGCATGGCCTTGGTGGTATGGTGGGAGCTTTCCTGACGGGACT
GTTCGCAAGCGAAAAGATATCTGCCTTGGATGGCAGCACGCTATCCCCCG
GAGCGATTGACGGCAATGGAGTTCAGGTTGGGAAGCAATTGGCAGAGATC
TGTGCTATCGCATCGTACTCCTTCGTGGTATCCTACATTATGCTTCTCAT
TCTCAAATATATTCCCGGAATGCAGTTGCGGGTGAGTGACGAGGATGAAA
TGCTGGGACTCGATCGGACTCAGTTTTTCGACGAGCAGATTGGGGATTGG
TCCATGGCGATGCCTGGCTCAGCGAGTCCCACGCTGGTCGGGGTACCCAA
AGAATCCTCTACGAGTGTGACGGAGTGCCGGGAAAGAAAGGGGAGCGAAA
TATAG
back to top

Coding sequence (CDS) from alignment at An14:598327..599981-

>CBS51388_008758-T1 ID=CBS51388_008758-T1|Name=CBS51388_008758-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7125bp|location=Sequence derived from alignment at An14:598327..599981- (Aspergillus niger CBS 513.88)
GGGGGCTCGAGTCTGAACGCCAGCATGCGTGCCATGGTTGCTGTTTTCAA
CACCAATACCGCCGGTTGCACAGGCATTCTCGGATGGGTTCTGGTAGACA
TGATCCGGTACAAAGGAAAGTTCACAGTTGTTGGTGCGTGTGAAGGTGCT
ATTGCTGGCTTGGTCGGGATCACGCCAGCGGCTGGTTGCGTCTCGCTATG
GCTCGCAGCATGCATCGGTTTCATTACCGCCATTGTATGCTCCTCCCTCA
AAAATGTGAACGAGTGGATCAATGTCGACGAGGGTATGGATGTGTTCAAG
CTGCATGGCCTTGGTGGTATGGTGGGAGCTTTCCTGACGGGACTGTTCGC
AAGCGAAAAGATATCTGCCTTGGATGGCAGCACGCTATCCCCCGGAGCGA
TTGACGGCAATGGAGTTCAGGTTGGGAAGCAATTGGCAGAGATCTGTGCT
ATCGCATCGTACTCCTTCGTGGTATCCTACATTATGCTTCTCATTCTCAA
ATATATTCCCGGAATGCAGTTGCGGGTGAGTGACGAGGATGAAATGCTGG
GACTCGATCGGACTCAGTTTTTCGACGAGCAGATTGGGGATTGGTCCATG
GCGATGCCTGGCTCAGCGAGTCCCACGCTGGTCGGGGTACCCAAAGAATC
CTCTACGAGTGTGACGGAGTGCCGGGAAAGAAAGGGGAGCGAAATATAGG
TAATGATTGTCGTTGGAGGTGCCTTTGAACGAGGTGGCATTGTACCTTCA
TTGATCTTCAGCTTCTTCTGGGCGACCATAGTTTACTGCCCGCTAGCCCG
GTGGACATGGAGCAGTAACGGATGGCTCTACAACCTACCGGCCATTGATT
TTGCGGGAGGCGGCCCCGTGCATATCGCGTCCGGGTGTACAGCTCTGGCG
TATGCGTTGGTTTTGGGAAAGCGTAGGGATCACGGGGACCCTTCACTGCG
CAAGCCGCACAATACGACTCTGGTCTTCCTCGGGACAGTATTGATCTGGA
CTGGATGGTTGGGGTTCAATATCTACATTTCAATGGTTGTTTTGGGGATA
TTCTCTTACCTATTCAAGAGACGGTGGGCCCTTCATCGGTACACTGAAGA
ACTTTGGACTGATGGATGTCTTGGTGGCGCCCTCGCCCGGCTCCGCGGTC
TTACCGGACGTCGTCTTCTGTCTATTCCAGCTCCTATTTTGTGCATGCAC
ACCAGTCTACAATTCCTCAACGCCGGAGGGTGGTGATCCTACCCAGGTCG
ACGTGAACGCGCAATACACCGGATTCGAATACAACTATGTCTATATTACT
ACATGCACATTCATCGTGTTCCTTATCTTACCGGGGATTGGGATGCTCTA
CAGCGGCTTGTCCCGGAGGAAATCCGCGCTGGCCCTTCTCTTCCAGGCCT
TTATGGTTCTTGCAGTATGACTGAGGGGGGCTCGAGTCTGAACGCCAGCA
TGCGTGCCATGGTTGCTGTTTTCAACACCAATACCGCCGGTTGCACAGGC
ATTCTCGGATGGGTTCTGGTAGACATGATCCGGTACAAAGGAAAGTTCAC
AGTTGTTGGTGCGTGTGAAGGTGCTATTGCTGGCTTGGTCGGGATCACGC
CAGCGGCTGGTTGCGTCTCGCTATGGCTCGCAGCATGCATCGGTTTCATT
ACCGCCATTGTATGCTCCTCCCTCAAAAATGTGAACGAGTGGATCAATGT
CGACGAGGGTATGGATGTGTTCAAGCTGCATGGCCTTGGTGGTATGGTGG
GAGCTTTCCTGACGGGACTGTTCGCAAGCGAAAAGATATCTGCCTTGGAT
GGCAGCACGCTATCCCCCGGAGCGATTGACGGCAATGGAGTTCAGGTTGG
GAAGCAATTGGCAGAGATCTGTGCTATCGCATCGTACTCCTTCGTGGTAT
CCTACATTATGCTTCTCATTCTCAAATATATTCCCGGAATGCAGTTGCGG
GTGAGTGACGAGGATGAAATGCTGGGACTCGATCGGACTCAGTTTTTCGA
CGAGCAGATTGGGGATTGGTCCATGGCGATGCCTGGCTCAGCGAGTCCCA
CGCTGGTCGGGGTACCCAAAGAATCCTCTACGAGTGTGACGGAGTGCCGG
GAAAGAAAGGGGAGCGAAATATAGGTAATGATTGTCGTTGGAGGTGCCTT
TGAACGAGGTGGCATTGTACCTTCATTGATCTTCAGCTTCTTCTGGGCGA
CCATAGTTTACTGCCCGCTAGCCCGGTGGACATGGAGCAGTAACGGATGG
CTCTACAACCTACCGGCCATTGATTTTGCGGGAGGCGGCCCCGTGCATAT
CGCGTCCGGGTGTACAGCTCTGGCGTATGCGTTGGTTTTGGGAAAGCGTA
GGGATCACGGGGACCCTTCACTGCGCAAGCCGCACAATACGACTCTGGTC
TTCCTCGGGACAGTATTGATCTGGACTGGATGGTTGGGGTTCAATATCTA
CATTTCAATGGTTGTTTTGGGGATATTCTCTTACCTATTCAAGAGACGGT
GGGCCCTTCATCGGTACACTGAAGAACTTTGGACTGATGGATGTCTTGGT
GGCGCCCTCGCCCGGCTCCGCGGTCTTACCGGACGTCGTCTTCTGTCTAT
TCCAGCTCCTATTTTGTGCATGCACACCAGTCTACAATTCCTCAACGCCG
GAGGGTGGTGATCCTACCCAGGTCGACGTGAACGCGCAATACACCGGATT
CGAATACAACTATGTCTATATTACTACATGCACATTCATCGTGTTCCTTA
TCTTACCGGGGATTGGGATGCTCTACAGCGGCTTGTCCCGGAGGAAATCC
GCGCTGGCCCTTCTCTTCCAGGCCTTTATGGTTCTTGCAGTATGACTGAG
GGGGGCTCGAGTCTGAACGCCAGCATGCGTGCCATGGTTGCTGTTTTCAA
CACCAATACCGCCGGTTGCACAGGCATTCTCGGATGGGTTCTGGTAGACA
TGATCCGGTACAAAGGAAAGTTCACAGTTGTTGGTGCGTGTGAAGGTGCT
ATTGCTGGCTTGGTCGGGATCACGCCAGCGGCTGGTTGCGTCTCGCTATG
GCTCGCAGCATGCATCGGTTTCATTACCGCCATTGTATGCTCCTCCCTCA
AAAATGTGAACGAGTGGATCAATGTCGACGAGGGTATGGATGTGTTCAAG
CTGCATGGCCTTGGTGGTATGGTGGGAGCTTTCCTGACGGGACTGTTCGC
AAGCGAAAAGATATCTGCCTTGGATGGCAGCACGCTATCCCCCGGAGCGA
TTGACGGCAATGGAGTTCAGGTTGGGAAGCAATTGGCAGAGATCTGTGCT
ATCGCATCGTACTCCTTCGTGGTATCCTACATTATGCTTCTCATTCTCAA
ATATATTCCCGGAATGCAGTTGCGGGTGAGTGACGAGGATGAAATGCTGG
GACTCGATCGGACTCAGTTTTTCGACGAGCAGATTGGGGATTGGTCCATG
GCGATGCCTGGCTCAGCGAGTCCCACGCTGGTCGGGGTACCCAAAGAATC
CTCTACGAGTGTGACGGAGTGCCGGGAAAGAAAGGGGAGCGAAATATAGG
TAATGATTGTCGTTGGAGGTGCCTTTGAACGAGGTGGCATTGTACCTTCA
TTGATCTTCAGCTTCTTCTGGGCGACCATAGTTTACTGCCCGCTAGCCCG
GTGGACATGGAGCAGTAACGGATGGCTCTACAACCTACCGGCCATTGATT
TTGCGGGAGGCGGCCCCGTGCATATCGCGTCCGGGTGTACAGCTCTGGCG
TATGCGTTGGTTTTGGGAAAGCGTAGGGATCACGGGGACCCTTCACTGCG
CAAGCCGCACAATACGACTCTGGTCTTCCTCGGGACAGTATTGATCTGGA
CTGGATGGTTGGGGTTCAATATCTACATTTCAATGGTTGTTTTGGGGATA
TTCTCTTACCTATTCAAGAGACGGTGGGCCCTTCATCGGTACACTGAAGA
ACTTTGGACTGATGGATGTCTTGGTGGCGCCCTCGCCCGGCTCCGCGGTC
TTACCGGACGTCGTCTTCTGTCTATTCCAGCTCCTATTTTGTGCATGCAC
ACCAGTCTACAATTCCTCAACGCCGGAGGGTGGTGATCCTACCCAGGTCG
ACGTGAACGCGCAATACACCGGATTCGAATACAACTATGTCTATATTACT
ACATGCACATTCATCGTGTTCCTTATCTTACCGGGGATTGGGATGCTCTA
CAGCGGCTTGTCCCGGAGGAAATCCGCGCTGGCCCTTCTCTTCCAGGCCT
TTATGGTTCTTGCAGTATGACTGAGGGGGGCTCGAGTCTGAACGCCAGCA
TGCGTGCCATGGTTGCTGTTTTCAACACCAATACCGCCGGTTGCACAGGC
ATTCTCGGATGGGTTCTGGTAGACATGATCCGGTACAAAGGAAAGTTCAC
AGTTGTTGGTGCGTGTGAAGGTGCTATTGCTGGCTTGGTCGGGATCACGC
CAGCGGCTGGTTGCGTCTCGCTATGGCTCGCAGCATGCATCGGTTTCATT
ACCGCCATTGTATGCTCCTCCCTCAAAAATGTGAACGAGTGGATCAATGT
CGACGAGGGTATGGATGTGTTCAAGCTGCATGGCCTTGGTGGTATGGTGG
GAGCTTTCCTGACGGGACTGTTCGCAAGCGAAAAGATATCTGCCTTGGAT
GGCAGCACGCTATCCCCCGGAGCGATTGACGGCAATGGAGTTCAGGTTGG
GAAGCAATTGGCAGAGATCTGTGCTATCGCATCGTACTCCTTCGTGGTAT
CCTACATTATGCTTCTCATTCTCAAATATATTCCCGGAATGCAGTTGCGG
GTGAGTGACGAGGATGAAATGCTGGGACTCGATCGGACTCAGTTTTTCGA
CGAGCAGATTGGGGATTGGTCCATGGCGATGCCTGGCTCAGCGAGTCCCA
CGCTGGTCGGGGTACCCAAAGAATCCTCTACGAGTGTGACGGAGTGCCGG
GAAAGAAAGGGGAGCGAAATATAGGTAATGATTGTCGTTGGAGGTGCCTT
TGAACGAGGTGGCATTGTACCTTCATTGATCTTCAGCTTCTTCTGGGCGA
CCATAGTTTACTGCCCGCTAGCCCGGTGGACATGGAGCAGTAACGGATGG
CTCTACAACCTACCGGCCATTGATTTTGCGGGAGGCGGCCCCGTGCATAT
CGCGTCCGGGTGTACAGCTCTGGCGTATGCGTTGGTTTTGGGAAAGCGTA
GGGATCACGGGGACCCTTCACTGCGCAAGCCGCACAATACGACTCTGGTC
TTCCTCGGGACAGTATTGATCTGGACTGGATGGTTGGGGTTCAATATCTA
CATTTCAATGGTTGTTTTGGGGATATTCTCTTACCTATTCAAGAGACGGT
GGGCCCTTCATCGGTACACTGAAGAACTTTGGACTGATGGATGTCTTGGT
GGCGCCCTCGCCCGGCTCCGCGGTCTTACCGGACGTCGTCTTCTGTCTAT
TCCAGCTCCTATTTTGTGCATGCACACCAGTCTACAATTCCTCAACGCCG
GAGGGTGGTGATCCTACCCAGGTCGACGTGAACGCGCAATACACCGGATT
CGAATACAACTATGTCTATATTACTACATGCACATTCATCGTGTTCCTTA
TCTTACCGGGGATTGGGATGCTCTACAGCGGCTTGTCCCGGAGGAAATCC
GCGCTGGCCCTTCTCTTCCAGGCCTTTATGGTTCTTGCAGTATGACTGAG
GGGGGCTCGAGTCTGAACGCCAGCATGCGTGCCATGGTTGCTGTTTTCAA
CACCAATACCGCCGGTTGCACAGGCATTCTCGGATGGGTTCTGGTAGACA
TGATCCGGTACAAAGGAAAGTTCACAGTTGTTGGTGCGTGTGAAGGTGCT
ATTGCTGGCTTGGTCGGGATCACGCCAGCGGCTGGTTGCGTCTCGCTATG
GCTCGCAGCATGCATCGGTTTCATTACCGCCATTGTATGCTCCTCCCTCA
AAAATGTGAACGAGTGGATCAATGTCGACGAGGGTATGGATGTGTTCAAG
CTGCATGGCCTTGGTGGTATGGTGGGAGCTTTCCTGACGGGACTGTTCGC
AAGCGAAAAGATATCTGCCTTGGATGGCAGCACGCTATCCCCCGGAGCGA
TTGACGGCAATGGAGTTCAGGTTGGGAAGCAATTGGCAGAGATCTGTGCT
ATCGCATCGTACTCCTTCGTGGTATCCTACATTATGCTTCTCATTCTCAA
ATATATTCCCGGAATGCAGTTGCGGGTGAGTGACGAGGATGAAATGCTGG
GACTCGATCGGACTCAGTTTTTCGACGAGCAGATTGGGGATTGGTCCATG
GCGATGCCTGGCTCAGCGAGTCCCACGCTGGTCGGGGTACCCAAAGAATC
CTCTACGAGTGTGACGGAGTGCCGGGAAAGAAAGGGGAGCGAAATATAGG
TAATGATTGTCGTTGGAGGTGCCTTTGAACGAGGTGGCATTGTACCTTCA
TTGATCTTCAGCTTCTTCTGGGCGACCATAGTTTACTGCCCGCTAGCCCG
GTGGACATGGAGCAGTAACGGATGGCTCTACAACCTACCGGCCATTGATT
TTGCGGGAGGCGGCCCCGTGCATATCGCGTCCGGGTGTACAGCTCTGGCG
TATGCGTTGGTTTTGGGAAAGCGTAGGGATCACGGGGACCCTTCACTGCG
CAAGCCGCACAATACGACTCTGGTCTTCCTCGGGACAGTATTGATCTGGA
CTGGATGGTTGGGGTTCAATATCTACATTTCAATGGTTGTTTTGGGGATA
TTCTCTTACCTATTCAAGAGACGGTGGGCCCTTCATCGGTACACTGAAGA
ACTTTGGACTGATGGATGTCTTGGTGGCGCCCTCGCCCGGCTCCGCGGTC
TTACCGGACGTCGTCTTCTGTCTATTCCAGCTCCTATTTTGTGCATGCAC
ACCAGTCTACAATTCCTCAACGCCGGAGGGTGGTGATCCTACCCAGGTCG
ACGTGAACGCGCAATACACCGGATTCGAATACAACTATGTCTATATTACT
ACATGCACATTCATCGTGTTCCTTATCTTACCGGGGATTGGGATGCTCTA
CAGCGGCTTGTCCCGGAGGAAATCCGCGCTGGCCCTTCTCTTCCAGGCCT
TTATGGTTCTTGCAGTATGACTGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0072488ammonium transmembrane transport
GO:0015696ammonium transport
Vocabulary: Molecular Function
TermDefinition
GO:0008519ammonium transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008758CBS51388_008758Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008758-T1CBS51388_008758-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008758-T1.cdsCBS51388_008758-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008758-T1.exon5CBS51388_008758-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_008758-T1.exon4CBS51388_008758-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_008758-T1.exon3CBS51388_008758-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_008758-T1.exon2CBS51388_008758-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008758-T1.exon1CBS51388_008758-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR018047
DBxrefInterPro:IPR029020
DBxrefInterPro:IPR001905
DBxrefInterPro:IPR024041
DBxrefPFAM:PF00909
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:598327..599981 -
Powered by Drupal