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CBS51388_008778-T1, CBS51388_008778-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008778-T1
Unique NameCBS51388_008778-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:660991..662226-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008778-T1 ID=CBS51388_008778-T1|Name=CBS51388_008778-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1236bp|location=Sequence derived from alignment at An14:660991..662226- (Aspergillus niger CBS 513.88)
ATGCGTCAAGCTCAGTCTGCTTCTCTCCTCGCGGCCCTTCTGTCGGCCAC
CCAGGTCGCTGCCCACGGTCACGTCACTAACCTCGTCGTCGACGGTGTCT
ACTACGAGGGCTTCGACATCAGCGTCTTCCCTTACGAGTCCGACCCCCCG
AAGGTCGCCGCCTGGACGACCCCCAACACCGGTAACGGCTTCATCTCGCC
CGACGAGTACCGCAACCCCAACATCATCTGTCACGAGAACGCCACCAACG
CCCAGGCCCACGTTGTCGTCGGTGCCGGTGAGAAGATCAACATCCAGTGG
ACTGCCTGGCCCGACTCCCACCACGGTCCCGTCCTGGACTACCTGGCTCG
TTGTGACGGCAGCTGCGAGACCGTCGACAAAACCGACCTGGAGTTCTTCA
AGATCGACGGCGTCGGTCTCGTCAGCGACACCGAGGTCCCCGGTACCTGG
GGTACCGACCAGCTGATCAACAACAACAACAGCTGGATGGTCGAGATCCC
TCCCTCCATTGCCGCTGGTAACTACGTCCTCCGTCACGAGCTCATCGCTC
TCCACGGCGCTGAGGAGCAGGACGGCGCCCAGAACTACCCCCAGTGCTTC
AACCTCCAGGTCACCGGTACCGGTACCGCCACTCCCTCCGGTGTCAAGGG
TACCGAGCTCTACACTGCCACTGAGGGCGGTATCCTCGTCAACATCTACT
CCTCCCTGAGCACTTACACTATGCCCGGCCCTACTGCCTACAGCGGCGAT
GTCTCCATCACTCAGACTACTTCCGCTGTCACTTCCACCGGCACCGCCGT
GGTTGGCAGTGCTAGCGCCGTCGCTTCCGCTTCCTCGACCGCTGCCGCCG
CTACCAGCGCTGCTGCCGTGACCAGCGTTGACACCAACACCCAGATCGCT
CAGTCCAGCAGTGCCCCTGCCCCTGCTGCCCCTAGCTCCAGCTCCTCCGC
CTACACTCAGATCCCCGTGCAGGTCCCCTCTTCTTGGACTACCCTGTTGA
CCTTCACCAACACTCCCCAGGCTGTGCAGCCTACTACCTCGGTCCAGCCC
GAGCCTGCTCAGTCGACTATCACCCCTGCTCCGGCTGTTAGCTCTGCTGC
CTCCGGTAGCTCCGGTAGTCAGTCTCTGTACGGCCAGTGCGGTGGTATCA
ACTGGACTGGTGCTACTCAGTGCGCGAGCGGATCTAGCTGCCACTCGTAC
AACCCTTACTACTACCAGTGCATTGCTAGTGCTTAA
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Coding sequence (CDS) from alignment at An14:660991..662226-

>CBS51388_008778-T1 ID=CBS51388_008778-T1|Name=CBS51388_008778-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1236bp|location=Sequence derived from alignment at An14:660991..662226- (Aspergillus niger CBS 513.88)
ATGCGTCAAGCTCAGTCTGCTTCTCTCCTCGCGGCCCTTCTGTCGGCCAC
CCAGGTCGCTGCCCACGGTCACGTCACTAACCTCGTCGTCGACGGTGTCT
ACTACGAGGGCTTCGACATCAGCGTCTTCCCTTACGAGTCCGACCCCCCG
AAGGTCGCCGCCTGGACGACCCCCAACACCGGTAACGGCTTCATCTCGCC
CGACGAGTACCGCAACCCCAACATCATCTGTCACGAGAACGCCACCAACG
CCCAGGCCCACGTTGTCGTCGGTGCCGGTGAGAAGATCAACATCCAGTGG
ACTGCCTGGCCCGACTCCCACCACGGTCCCGTCCTGGACTACCTGGCTCG
TTGTGACGGCAGCTGCGAGACCGTCGACAAAACCGACCTGGAGTTCTTCA
AGATCGACGGCGTCGGTCTCGTCAGCGACACCGAGGTCCCCGGTACCTGG
GGTACCGACCAGCTGATCAACAACAACAACAGCTGGATGGTCGAGATCCC
TCCCTCCATTGCCGCTGGTAACTACGTCCTCCGTCACGAGCTCATCGCTC
TCCACGGCGCTGAGGAGCAGGACGGCGCCCAGAACTACCCCCAGTGCTTC
AACCTCCAGGTCACCGGTACCGGTACCGCCACTCCCTCCGGTGTCAAGGG
TACCGAGCTCTACACTGCCACTGAGGGCGGTATCCTCGTCAACATCTACT
CCTCCCTGAGCACTTACACTATGCCCGGCCCTACTGCCTACAGCGGCGAT
GTCTCCATCACTCAGACTACTTCCGCTGTCACTTCCACCGGCACCGCCGT
GGTTGGCAGTGCTAGCGCCGTCGCTTCCGCTTCCTCGACCGCTGCCGCCG
CTACCAGCGCTGCTGCCGTGACCAGCGTTGACACCAACACCCAGATCGCT
CAGTCCAGCAGTGCCCCTGCCCCTGCTGCCCCTAGCTCCAGCTCCTCCGC
CTACACTCAGATCCCCGTGCAGGTCCCCTCTTCTTGGACTACCCTGTTGA
CCTTCACCAACACTCCCCAGGCTGTGCAGCCTACTACCTCGGTCCAGCCC
GAGCCTGCTCAGTCGACTATCACCCCTGCTCCGGCTGTTAGCTCTGCTGC
CTCCGGTAGCTCCGGTAGTCAGTCTCTGTACGGCCAGTGCGGTGGTATCA
ACTGGACTGGTGCTACTCAGTGCGCGAGCGGATCTAGCTGCCACTCGTAC
AACCCTTACTACTACCAGTGCATTGCTAGTGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0030248cellulose binding
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008778CBS51388_008778Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008778-T1.cdsCBS51388_008778-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008778-T1.exon1CBS51388_008778-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008778-T1CBS51388_008778-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
NoteCAZy:AA9
DBxrefInterPro:IPR035971
DBxrefInterPro:IPR005103
DBxrefInterPro:IPR000254
DBxrefPFAM:PF03443
DBxrefPFAM:PF00734
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:660991..662226 -
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