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CBS51388_008784-T1, CBS51388_008784-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008784-T1
Unique NameCBS51388_008784-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:682273..683108-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008784-T1 ID=CBS51388_008784-T1|Name=CBS51388_008784-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=836bp|location=Sequence derived from alignment at An14:682273..683108- (Aspergillus niger CBS 513.88)
ATGAAGCTCCCTGTGACACTTGCTATGCTTGCGGCCACCGCCATGGGCCA
GACGATGTGCTCTCAATATGACAGTGCCTCGAGCCCCCCATATTCAGTGA
ACCAGAACCTCTGGGGCGAGTACCAAGGCACCGGCAGCCAGTGTGTATAT
GTCGACAAACTCTCCAGCAGTGGTGCATCCTGGCACACCGAATGGACCTG
GAGCGGTGGTGAGGGAACAGTGAAAAGCTACTCTAACTCTGGCGTTACAT
TTAACAAGAAGCTCGTGAGTGATGTATCAAGCATCCCCACCTCGGTGGAA
TGGAAGCAGGACAACACCAACGTCAACGCCGATGTCGCGTATGATCTTTT
CACCGCGGCGAATGTGGACCATGCTACTTCTAGCGGCGACTATGAACTGA
TGATTTGGTATGTGAGCTCGCAAAGAATCAAAGAATACAGAAATCTAACA
ACCCCAGGCTTGCCCGCTACGGCAACATCCAGCCCATTGGCAAGCAAATT
GCCACGGCCACAGTGGGAGGCAAGTCCTGGGAGGTGTGGTATGGCAGCAC
CACCCAGGCCGGTGCGGAGCAGAGGACATACAGCTTCGTGTCGGAAAGCC
CTATCAACTCATACAGTGGGGACATCAATGCATTTTTCAGCTATCTAACT
CAGAACCAAGGCTTTCCCGCCAGCTCTCAGTACTTGATCAGTAAGATTCC
CTGATTCTACCAGCGGACGCCGCAGCGAAACAGTCACTAACAGAAGTGAT
GTGTAGATCTGCAGTTTGGAACTGAGGCGTTCACCGGGGGCCCGGCAACC
TTCACGGTTGACAACTGGACCGCCAGTGTCAACTAG
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Coding sequence (CDS) from alignment at An14:682273..683108-

>CBS51388_008784-T1 ID=CBS51388_008784-T1|Name=CBS51388_008784-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2160bp|location=Sequence derived from alignment at An14:682273..683108- (Aspergillus niger CBS 513.88)
ATCTGCAGTTTGGAACTGAGGCGTTCACCGGGGGCCCGGCAACCTTCACG
GTTGACAACTGGACCGCCAGTGTCAACTAGGCTTGCCCGCTACGGCAACA
TCCAGCCCATTGGCAAGCAAATTGCCACGGCCACAGTGGGAGGCAAGTCC
TGGGAGGTGTGGTATGGCAGCACCACCCAGGCCGGTGCGGAGCAGAGGAC
ATACAGCTTCGTGTCGGAAAGCCCTATCAACTCATACAGTGGGGACATCA
ATGCATTTTTCAGCTATCTAACTCAGAACCAAGGCTTTCCCGCCAGCTCT
CAGTACTTGATCAATGAAGCTCCCTGTGACACTTGCTATGCTTGCGGCCA
CCGCCATGGGCCAGACGATGTGCTCTCAATATGACAGTGCCTCGAGCCCC
CCATATTCAGTGAACCAGAACCTCTGGGGCGAGTACCAAGGCACCGGCAG
CCAGTGTGTATATGTCGACAAACTCTCCAGCAGTGGTGCATCCTGGCACA
CCGAATGGACCTGGAGCGGTGGTGAGGGAACAGTGAAAAGCTACTCTAAC
TCTGGCGTTACATTTAACAAGAAGCTCGTGAGTGATGTATCAAGCATCCC
CACCTCGGTGGAATGGAAGCAGGACAACACCAACGTCAACGCCGATGTCG
CGTATGATCTTTTCACCGCGGCGAATGTGGACCATGCTACTTCTAGCGGC
GACTATGAACTGATGATTTGATCTGCAGTTTGGAACTGAGGCGTTCACCG
GGGGCCCGGCAACCTTCACGGTTGACAACTGGACCGCCAGTGTCAACTAG
GCTTGCCCGCTACGGCAACATCCAGCCCATTGGCAAGCAAATTGCCACGG
CCACAGTGGGAGGCAAGTCCTGGGAGGTGTGGTATGGCAGCACCACCCAG
GCCGGTGCGGAGCAGAGGACATACAGCTTCGTGTCGGAAAGCCCTATCAA
CTCATACAGTGGGGACATCAATGCATTTTTCAGCTATCTAACTCAGAACC
AAGGCTTTCCCGCCAGCTCTCAGTACTTGATCAATGAAGCTCCCTGTGAC
ACTTGCTATGCTTGCGGCCACCGCCATGGGCCAGACGATGTGCTCTCAAT
ATGACAGTGCCTCGAGCCCCCCATATTCAGTGAACCAGAACCTCTGGGGC
GAGTACCAAGGCACCGGCAGCCAGTGTGTATATGTCGACAAACTCTCCAG
CAGTGGTGCATCCTGGCACACCGAATGGACCTGGAGCGGTGGTGAGGGAA
CAGTGAAAAGCTACTCTAACTCTGGCGTTACATTTAACAAGAAGCTCGTG
AGTGATGTATCAAGCATCCCCACCTCGGTGGAATGGAAGCAGGACAACAC
CAACGTCAACGCCGATGTCGCGTATGATCTTTTCACCGCGGCGAATGTGG
ACCATGCTACTTCTAGCGGCGACTATGAACTGATGATTTGATCTGCAGTT
TGGAACTGAGGCGTTCACCGGGGGCCCGGCAACCTTCACGGTTGACAACT
GGACCGCCAGTGTCAACTAGGCTTGCCCGCTACGGCAACATCCAGCCCAT
TGGCAAGCAAATTGCCACGGCCACAGTGGGAGGCAAGTCCTGGGAGGTGT
GGTATGGCAGCACCACCCAGGCCGGTGCGGAGCAGAGGACATACAGCTTC
GTGTCGGAAAGCCCTATCAACTCATACAGTGGGGACATCAATGCATTTTT
CAGCTATCTAACTCAGAACCAAGGCTTTCCCGCCAGCTCTCAGTACTTGA
TCAATGAAGCTCCCTGTGACACTTGCTATGCTTGCGGCCACCGCCATGGG
CCAGACGATGTGCTCTCAATATGACAGTGCCTCGAGCCCCCCATATTCAG
TGAACCAGAACCTCTGGGGCGAGTACCAAGGCACCGGCAGCCAGTGTGTA
TATGTCGACAAACTCTCCAGCAGTGGTGCATCCTGGCACACCGAATGGAC
CTGGAGCGGTGGTGAGGGAACAGTGAAAAGCTACTCTAACTCTGGCGTTA
CATTTAACAAGAAGCTCGTGAGTGATGTATCAAGCATCCCCACCTCGGTG
GAATGGAAGCAGGACAACACCAACGTCAACGCCGATGTCGCGTATGATCT
TTTCACCGCGGCGAATGTGGACCATGCTACTTCTAGCGGCGACTATGAAC
TGATGATTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000272polysaccharide catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008810cellulase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008784CBS51388_008784Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008784-T1CBS51388_008784-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008784-T1.cdsCBS51388_008784-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008784-T1.exon3CBS51388_008784-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_008784-T1.exon2CBS51388_008784-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008784-T1.exon1CBS51388_008784-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-16)
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR013319
DBxrefInterPro:IPR002594
DBxrefPFAM:PF01670
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:682273..683108 -
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