You are here

Home

CBS51388_008816-T1, CBS51388_008816-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008816-T1
Unique NameCBS51388_008816-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:768815..770474+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008816-T1 ID=CBS51388_008816-T1|Name=CBS51388_008816-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1660bp|location=Sequence derived from alignment at An14:768815..770474+ (Aspergillus niger CBS 513.88)
ATGGCTCCTCCAGTCATATTCACGGCAGCAGTCTTGTTCATGCTGCCCAA
CCAACTCGCAGCCCTGCCTCAGAACCCTGGGAACATCTCCACTCCCGCAA
CGGCCAACCATGGCGTGCTGCCGAGGTCCCTTGAATCCTGTCTAGGAGCT
ACTGGCGTATCAGTTGTGTACGCCACGGATGCTGGGTACTCGAATCTCAC
GGTGGCGGACAATAGCAATTACCACCCCCATCCCCAAGCTGTTGTCATTC
CCAACTCAACGGAGCAAGTTGCTGCTACTGTTCGCTGCGTGGCAGCCGAG
CAGGGCCGGGTCACTCTCACGACCCGTGGCGGTGGCCATGGCTATGCTGC
GTACAGTCTCTCAGGACAAGTCGTCATCGACTCCAGCCAGATGACCGACA
TTGTCCTGGACGAGAGCACACAGGAGGTTACCGTGCAGATGGGTCAGAAG
CTTGGCCCGCTAGCTCTGGCGATGGGCCGCGCGGGGTATGCCTTGCCTCA
TGGCACCTGTCCGGGGGTGGGGGTAGCTGGACACAGCCTGGGAGGTGGCT
GGGGGTTTACCTCTCGCGAGTGGGGATGGCTAGTAGACAGATGTAAGTTG
AATGATTCGTTCGAATGCCTTCCGAATTTCCCAGCTAATTCCAAGCCAAG
TGGTCTCACTGGAGCTTGTGGATGTGACCGGCCGCATCCGAACGATCAGC
CCTAAGGCAACAAACCCCAATACCACATCTACTGACGACACAAATGATGG
TGATCTCTGGTGGGCGCTTCGGGGTGCTGGCTCCAACAACTTTGGTATCG
TTACCTCGTTCACCTACCGCATGCAGCCCGCCCCAACGGCTATCGTCAAC
TACAACATTGGCTTCGCGAGTCAGTCAGACTGCGTACAGGTCCTTTTAAC
CCTACAAGAGATTGGATCCCACCCAGCGACCTCCTCTGCGGGCTTCCCGA
CCTCTTTGGGTGGAGAACTCATCATAGATGGTGGCTACCAGCCCCCTAAG
GCCTACTGCAGCTTTACGGGCCAATACCTCGGCGATTCAGCCGCCTACAA
CGAAACTATCCAGCGCCTCCTTTCCCCACTCGCACGCCAATCCATCCAGC
CCCTCACAACCACCAGCTCCTTTTACACCAACTGGGTCTCCGCTCTCACC
AATCTCATGGGTGACCTCGACTCTCCGTCTGTCCCACAACCCTATTACGC
CAAATCCCTCTTCGACGACGGGCACCCTAACTACACCAGCGCCTCCATCT
CGAGGATATTTTCCGCCATCCAGCCCGCAGGGCCTGATGCCTTCATCTCC
TTCGACCTGAATGGCCCTGATGCCGCTACCACCCTGCCCCCGGATGACTC
TGTCGGGCCCATGGCTTTCAACCACCGAAACAATCTCTTCATGTCGCAAA
TCTATGCTTGGGATTTCCCGGGGTTCACAAATGCGTCAGCACGGGAGACT
GCAGTTGATAGGCTTTCCGATGTCGCGGATGCAGTGCGCCAGGCCGCTCC
TAAGGGCGGTTGGCAAGCGTATCAGAATTATATCGATCCGTATTTGCAGA
ACTGGGCGGAGAGGTATTATGGGGACGCTTTGGATCGGCTGAAGGAGATC
AAGAAGAAGTGGGACCCTTTGAACATTTTGGATTTCCCACAGGGGTTGGG
ACGGGCTTGA
back to top

Coding sequence (CDS) from alignment at An14:768815..770474+

>CBS51388_008816-T1 ID=CBS51388_008816-T1|Name=CBS51388_008816-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3204bp|location=Sequence derived from alignment at An14:768815..770474+ (Aspergillus niger CBS 513.88)
ATGGCTCCTCCAGTCATATTCACGGCAGCAGTCTTGTTCATGCTGCCCAA
CCAACTCGCAGCCCTGCCTCAGAACCCTGGGAACATCTCCACTCCCGCAA
CGGCCAACCATGGCGTGCTGCCGAGGTCCCTTGAATCCTGTCTAGGAGCT
ACTGGCGTATCAGTTGTGTACGCCACGGATGCTGGGTACTCGAATCTCAC
GGTGGCGGACAATAGCAATTACCACCCCCATCCCCAAGCTGTTGTCATTC
CCAACTCAACGGAGCAAGTTGCTGCTACTGTTCGCTGCGTGGCAGCCGAG
CAGGGCCGGGTCACTCTCACGACCCGTGGCGGTGGCCATGGCTATGCTGC
GTACAGTCTCTCAGGACAAGTCGTCATCGACTCCAGCCAGATGACCGACA
TTGTCCTGGACGAGAGCACACAGGAGGTTACCGTGCAGATGGGTCAGAAG
CTTGGCCCGCTAGCTCTGGCGATGGGCCGCGCGGGGTATGCCTTGCCTCA
TGGCACCTGTCCGGGGGTGGGGGTAGCTGGACACAGCCTGGGAGGTGGCT
GGGGGTTTACCTCTCGCGAGTGGGGATGGCTAGTAGACAGATTGGTCTCA
CTGGAGCTTGTGGATGTGACCGGCCGCATCCGAACGATCAGCCCTAAGGC
AACAAACCCCAATACCACATCTACTGACGACACAAATGATGGTGATCTCT
GGTGGGCGCTTCGGGGTGCTGGCTCCAACAACTTTGGTATCGTTACCTCG
TTCACCTACCGCATGCAGCCCGCCCCAACGGCTATCGTCAACTACAACAT
TGGCTTCGCGAGTCAGTCAGACTGCGTACAGGTCCTTTTAACCCTACAAG
AGATTGGATCCCACCCAGCGACCTCCTCTGCGGGCTTCCCGACCTCTTTG
GGTGGAGAACTCATCATAGATGGTGGCTACCAGCCCCCTAAGGCCTACTG
CAGCTTTACGGGCCAATACCTCGGCGATTCAGCCGCCTACAACGAAACTA
TCCAGCGCCTCCTTTCCCCACTCGCACGCCAATCCATCCAGCCCCTCACA
ACCACCAGCTCCTTTTACACCAACTGGGTCTCCGCTCTCACCAATCTCAT
GGGTGACCTCGACTCTCCGTCTGTCCCACAACCCTATTACGCCAAATCCC
TCTTCGACGACGGGCACCCTAACTACACCAGCGCCTCCATCTCGAGGATA
TTTTCCGCCATCCAGCCCGCAGGGCCTGATGCCTTCATCTCCTTCGACCT
GAATGGCCCTGATGCCGCTACCACCCTGCCCCCGGATGACTCTGTCGGGC
CCATGGCTTTCAACCACCGAAACAATCTCTTCATGTCGCAAATCTATGCT
TGGGATTTCCCGGGGTTCACAAATGCGTCAGCACGGGAGACTGCAGTTGA
TAGGCTTTCCGATGTCGCGGATGCAGTGCGCCAGGCCGCTCCTAAGGGCG
GTTGGCAAGCGTATCAGAATTATATCGATCCGTATTTGCAGAACTGGGCG
GAGAGGTATTATGGGGACGCTTTGGATCGGCTGAAGGAGATCAAGAAGAA
GTGGGACCCTTTGAACATTTTGGATTTCCCACAGGGGTTGGGACGGGCTT
GAATGGCTCCTCCAGTCATATTCACGGCAGCAGTCTTGTTCATGCTGCCC
AACCAACTCGCAGCCCTGCCTCAGAACCCTGGGAACATCTCCACTCCCGC
AACGGCCAACCATGGCGTGCTGCCGAGGTCCCTTGAATCCTGTCTAGGAG
CTACTGGCGTATCAGTTGTGTACGCCACGGATGCTGGGTACTCGAATCTC
ACGGTGGCGGACAATAGCAATTACCACCCCCATCCCCAAGCTGTTGTCAT
TCCCAACTCAACGGAGCAAGTTGCTGCTACTGTTCGCTGCGTGGCAGCCG
AGCAGGGCCGGGTCACTCTCACGACCCGTGGCGGTGGCCATGGCTATGCT
GCGTACAGTCTCTCAGGACAAGTCGTCATCGACTCCAGCCAGATGACCGA
CATTGTCCTGGACGAGAGCACACAGGAGGTTACCGTGCAGATGGGTCAGA
AGCTTGGCCCGCTAGCTCTGGCGATGGGCCGCGCGGGGTATGCCTTGCCT
CATGGCACCTGTCCGGGGGTGGGGGTAGCTGGACACAGCCTGGGAGGTGG
CTGGGGGTTTACCTCTCGCGAGTGGGGATGGCTAGTAGACAGATTGGTCT
CACTGGAGCTTGTGGATGTGACCGGCCGCATCCGAACGATCAGCCCTAAG
GCAACAAACCCCAATACCACATCTACTGACGACACAAATGATGGTGATCT
CTGGTGGGCGCTTCGGGGTGCTGGCTCCAACAACTTTGGTATCGTTACCT
CGTTCACCTACCGCATGCAGCCCGCCCCAACGGCTATCGTCAACTACAAC
ATTGGCTTCGCGAGTCAGTCAGACTGCGTACAGGTCCTTTTAACCCTACA
AGAGATTGGATCCCACCCAGCGACCTCCTCTGCGGGCTTCCCGACCTCTT
TGGGTGGAGAACTCATCATAGATGGTGGCTACCAGCCCCCTAAGGCCTAC
TGCAGCTTTACGGGCCAATACCTCGGCGATTCAGCCGCCTACAACGAAAC
TATCCAGCGCCTCCTTTCCCCACTCGCACGCCAATCCATCCAGCCCCTCA
CAACCACCAGCTCCTTTTACACCAACTGGGTCTCCGCTCTCACCAATCTC
ATGGGTGACCTCGACTCTCCGTCTGTCCCACAACCCTATTACGCCAAATC
CCTCTTCGACGACGGGCACCCTAACTACACCAGCGCCTCCATCTCGAGGA
TATTTTCCGCCATCCAGCCCGCAGGGCCTGATGCCTTCATCTCCTTCGAC
CTGAATGGCCCTGATGCCGCTACCACCCTGCCCCCGGATGACTCTGTCGG
GCCCATGGCTTTCAACCACCGAAACAATCTCTTCATGTCGCAAATCTATG
CTTGGGATTTCCCGGGGTTCACAAATGCGTCAGCACGGGAGACTGCAGTT
GATAGGCTTTCCGATGTCGCGGATGCAGTGCGCCAGGCCGCTCCTAAGGG
CGGTTGGCAAGCGTATCAGAATTATATCGATCCGTATTTGCAGAACTGGG
CGGAGAGGTATTATGGGGACGCTTTGGATCGGCTGAAGGAGATCAAGAAG
AAGTGGGACCCTTTGAACATTTTGGATTTCCCACAGGGGTTGGGACGGGC
TTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0071949FAD binding
GO:0050660flavin adenine dinucleotide binding
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008816CBS51388_008816Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008816-T1.exon1CBS51388_008816-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_008816-T1.exon2CBS51388_008816-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008816-T1.cdsCBS51388_008816-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008816-T1CBS51388_008816-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
DBxrefInterPro:IPR016164
DBxrefInterPro:IPR036318
DBxrefInterPro:IPR016166
DBxrefInterPro:IPR006094
DBxrefInterPro:IPR012951
DBxrefPFAM:PF01565
DBxrefPFAM:PF08031
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:768815..770474 +
Powered by Drupal