You are here

CBS51388_008817-T1, CBS51388_008817-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008817-T1
Unique NameCBS51388_008817-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:771951..772581-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008817-T1 ID=CBS51388_008817-T1|Name=CBS51388_008817-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=631bp|location=Sequence derived from alignment at An14:771951..772581- (Aspergillus niger CBS 513.88)
ATGTTCTCCAGTACTGTGGCCCGTCCACTACAGCTGGTCACTCGGTTCAT GCAGTGGGCCAGTGCAGTCATCGTGATGGGTATCACCTCCTACTTCATCC ACAAGGGACCTCGCGGCCAGCACACCATCTACTGGGAAGTCATTGTAAGC ATGCTCCCATCCTTGATGTAAACAGATCAAACCTTATCAACTAACCATGG ATTAGTCGACCATGTCTGTTGTCTTCTTCCTGCCCGCCTTTATCTCGCCG TTCATGCCCAATGCCCTGAGCAAGTTTGTCTTGATCATCGATGTCATCTT CTCGTACCTGTATGTGCCATCCAATCAAGCAGCATCTATATCCTTCTGTG CTGATACTGACCATGACCACAGCTGGCTCACGGCTTTCATCTTTGCCGCG CAAGATTACAACTGGCACAACTGCGGCGCCAACTCTCCCCCCGGCCTATC CTGCTCCAAGAAGAAGGCCAATGAAGCCTTCATCTTCCTGACCTTCATCT TCACCTTCTTCGCCATCTTCCTCGAAGTCGGTGCTCTCTGGGCCTACCGT CGCGAGAGCACCCCAGTCCGGGAGAAGAACACCGGTGGCGCCCACGGCGG TCCTGCTGACGCGCCTGTGGCCACAGCCTAG
back to top

Coding sequence (CDS) from alignment at An14:771951..772581-

>CBS51388_008817-T1 ID=CBS51388_008817-T1|Name=CBS51388_008817-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1521bp|location=Sequence derived from alignment at An14:771951..772581- (Aspergillus niger CBS 513.88)
CTGGCTCACGGCTTTCATCTTTGCCGCGCAAGATTACAACTGGCACAACT
GCGGCGCCAACTCTCCCCCCGGCCTATCCTGCTCCAAGAAGAAGGCCAAT
GAAGCCTTCATCTTCCTGACCTTCATCTTCACCTTCTTCGCCATCTTCCT
CGAAGTCGGTGCTCTCTGGGCCTACCGTCGCGAGAGCACCCCAGTCCGGG
AGAAGAACACCGGTGGCGCCCACGGCGGTCCTGCTGACGCGCCTGTGGCC
ACAGCCTAGTCGACCATGTCTGTTGTCTTCTTCCTGCCCGCCTTTATCTC
GCCGTTCATGCCCAATGCCCTGAGCAAGTTTGTCTTGATCATCGATGTCA
TCTTCTCGTACCTATGTTCTCCAGTACTGTGGCCCGTCCACTACAGCTGG
TCACTCGGTTCATGCAGTGGGCCAGTGCAGTCATCGTGATGGGTATCACC
TCCTACTTCATCCACAAGGGACCTCGCGGCCAGCACACCATCTACTGGGA
AGTCATTCTGGCTCACGGCTTTCATCTTTGCCGCGCAAGATTACAACTGG
CACAACTGCGGCGCCAACTCTCCCCCCGGCCTATCCTGCTCCAAGAAGAA
GGCCAATGAAGCCTTCATCTTCCTGACCTTCATCTTCACCTTCTTCGCCA
TCTTCCTCGAAGTCGGTGCTCTCTGGGCCTACCGTCGCGAGAGCACCCCA
GTCCGGGAGAAGAACACCGGTGGCGCCCACGGCGGTCCTGCTGACGCGCC
TGTGGCCACAGCCTAGTCGACCATGTCTGTTGTCTTCTTCCTGCCCGCCT
TTATCTCGCCGTTCATGCCCAATGCCCTGAGCAAGTTTGTCTTGATCATC
GATGTCATCTTCTCGTACCTATGTTCTCCAGTACTGTGGCCCGTCCACTA
CAGCTGGTCACTCGGTTCATGCAGTGGGCCAGTGCAGTCATCGTGATGGG
TATCACCTCCTACTTCATCCACAAGGGACCTCGCGGCCAGCACACCATCT
ACTGGGAAGTCATTCTGGCTCACGGCTTTCATCTTTGCCGCGCAAGATTA
CAACTGGCACAACTGCGGCGCCAACTCTCCCCCCGGCCTATCCTGCTCCA
AGAAGAAGGCCAATGAAGCCTTCATCTTCCTGACCTTCATCTTCACCTTC
TTCGCCATCTTCCTCGAAGTCGGTGCTCTCTGGGCCTACCGTCGCGAGAG
CACCCCAGTCCGGGAGAAGAACACCGGTGGCGCCCACGGCGGTCCTGCTG
ACGCGCCTGTGGCCACAGCCTAGTCGACCATGTCTGTTGTCTTCTTCCTG
CCCGCCTTTATCTCGCCGTTCATGCCCAATGCCCTGAGCAAGTTTGTCTT
GATCATCGATGTCATCTTCTCGTACCTATGTTCTCCAGTACTGTGGCCCG
TCCACTACAGCTGGTCACTCGGTTCATGCAGTGGGCCAGTGCAGTCATCG
TGATGGGTATCACCTCCTACTTCATCCACAAGGGACCTCGCGGCCAGCAC
ACCATCTACTGGGAAGTCATT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008817CBS51388_008817Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008817-T1CBS51388_008817-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008817-T1.cdsCBS51388_008817-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008817-T1.exon3CBS51388_008817-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_008817-T1.exon2CBS51388_008817-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008817-T1.exon1CBS51388_008817-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR008253
DBxrefPFAM:PF01284
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:771951..772581 -