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Sequences
The following sequences are available for this feature:
mRNA from alignment at An14:793554..794265+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008825-T1 ID=CBS51388_008825-T1|Name=CBS51388_008825-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=712bp|location=Sequence derived from alignment at An14:793554..794265+ (Aspergillus niger CBS 513.88)
ATGCCTACAATGTGGTTGTCCGATAATCAGAGTAAGAAACGCCTACTTTG
CACACTTCGCACGAAAGCATTTCCGGGTCATTGGCTAACGCACGTCCTTT
CTACAACAGAGATCGGAGTAATCTTCTGCTCAGCTGGTATGTCTACCTAA
CAGGCTTGCGACGACCTATACAACCAACCGCTCCATACACATACTAACGA
TGTCCCCCAACAGGAGGCTTGTTCCTCTTCGGCGGAGTCCTAATGTTCTT
CGATCGCTCACTGTACGTCCATATCCAACCCAACTCTATAATCCAAATAC
ATAATATAACTAACAAAATTAACAATCTAGCCTGGCGATGGGAAATGTAC
GCCATCCTAAACTACCCTACTCCAATGCGATATGTGGAAACCCCAACTAA
CCCACTCCACCGCAGATCCTCTTCCTCATCGGCCTCACCCTAATAATCGG
CCTCGAAAAGACCTTCGCCTTCTTCTCCCGTCGCCAAAAGCTCAAGGGCA
CCGCTGCCTTCGCCGCTGGAATTCTACTCATTCTCCTCCGCTGGCCGCTA
ACCGGGTTCATAATCGAGTTGTACGGTCTCTTCATCCTCTTCGGCGACTT
CCTGATCACAATTGGCCAGTTCGCGGGGAATATCCCCGTCGTGGGACCAT
TTATTCAAAAGGTTCTGGAGACGCTGGCGGGTGGAAGAAGGAATGCGGAG
TTGCCAGTATAG back to topCoding sequence (CDS) from alignment at An14:793554..794265+ >CBS51388_008825-T1 ID=CBS51388_008825-T1|Name=CBS51388_008825-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1992bp|location=Sequence derived from alignment at An14:793554..794265+ (Aspergillus niger CBS 513.88)
ATGCCTACAATGTGGTTGTCCGATAATCAGAGTAAGAAACGCCTACTTTG
CACACTTCGCACGAAAGCATTTCCGGGTCATTGGCTAACGCACGTCCTTT
CTACAACAGAGATCGGAGTAATCTTCTGCTCAGCTGGAGGCTTGTTCCTC
TTCGGCGGAGTCCTAATGTTCTTCGATCGCTCACTCCTGGCGATGGGAAA
TATCCTCTTCCTCATCGGCCTCACCCTAATAATCGGCCTCGAAAAGACCT
TCGCCTTCTTCTCCCGTCGCCAAAAGCTCAAGGGCACCGCTGCCTTCGCC
GCTGGAATTCTACTCATTCTCCTCCGCTGGCCGCTAACCGGGTTCATAAT
CGAGTTGTACGGTCTCTTCATCCTCTTCGGCGACTTCCTGATCACAATTG
GCCAGTTCGCGGGGAATATCCCCGTCGTGGGACCATTTATTCAAAAGGTT
CTGGAGACGCTGGCGGGTGGAAGAAGGAATGCGGAGTTGCCAGTATAGAT
GCCTACAATGTGGTTGTCCGATAATCAGAGTAAGAAACGCCTACTTTGCA
CACTTCGCACGAAAGCATTTCCGGGTCATTGGCTAACGCACGTCCTTTCT
ACAACAGAGATCGGAGTAATCTTCTGCTCAGCTGGAGGCTTGTTCCTCTT
CGGCGGAGTCCTAATGTTCTTCGATCGCTCACTCCTGGCGATGGGAAATA
TCCTCTTCCTCATCGGCCTCACCCTAATAATCGGCCTCGAAAAGACCTTC
GCCTTCTTCTCCCGTCGCCAAAAGCTCAAGGGCACCGCTGCCTTCGCCGC
TGGAATTCTACTCATTCTCCTCCGCTGGCCGCTAACCGGGTTCATAATCG
AGTTGTACGGTCTCTTCATCCTCTTCGGCGACTTCCTGATCACAATTGGC
CAGTTCGCGGGGAATATCCCCGTCGTGGGACCATTTATTCAAAAGGTTCT
GGAGACGCTGGCGGGTGGAAGAAGGAATGCGGAGTTGCCAGTATAGATGC
CTACAATGTGGTTGTCCGATAATCAGAGTAAGAAACGCCTACTTTGCACA
CTTCGCACGAAAGCATTTCCGGGTCATTGGCTAACGCACGTCCTTTCTAC
AACAGAGATCGGAGTAATCTTCTGCTCAGCTGGAGGCTTGTTCCTCTTCG
GCGGAGTCCTAATGTTCTTCGATCGCTCACTCCTGGCGATGGGAAATATC
CTCTTCCTCATCGGCCTCACCCTAATAATCGGCCTCGAAAAGACCTTCGC
CTTCTTCTCCCGTCGCCAAAAGCTCAAGGGCACCGCTGCCTTCGCCGCTG
GAATTCTACTCATTCTCCTCCGCTGGCCGCTAACCGGGTTCATAATCGAG
TTGTACGGTCTCTTCATCCTCTTCGGCGACTTCCTGATCACAATTGGCCA
GTTCGCGGGGAATATCCCCGTCGTGGGACCATTTATTCAAAAGGTTCTGG
AGACGCTGGCGGGTGGAAGAAGGAATGCGGAGTTGCCAGTATAGATGCCT
ACAATGTGGTTGTCCGATAATCAGAGTAAGAAACGCCTACTTTGCACACT
TCGCACGAAAGCATTTCCGGGTCATTGGCTAACGCACGTCCTTTCTACAA
CAGAGATCGGAGTAATCTTCTGCTCAGCTGGAGGCTTGTTCCTCTTCGGC
GGAGTCCTAATGTTCTTCGATCGCTCACTCCTGGCGATGGGAAATATCCT
CTTCCTCATCGGCCTCACCCTAATAATCGGCCTCGAAAAGACCTTCGCCT
TCTTCTCCCGTCGCCAAAAGCTCAAGGGCACCGCTGCCTTCGCCGCTGGA
ATTCTACTCATTCTCCTCCGCTGGCCGCTAACCGGGTTCATAATCGAGTT
GTACGGTCTCTTCATCCTCTTCGGCGACTTCCTGATCACAATTGGCCAGT
TCGCGGGGAATATCCCCGTCGTGGGACCATTTATTCAAAAGGTTCTGGAG
ACGCTGGCGGGTGGAAGAAGGAATGCGGAGTTGCCAGTATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016192 | vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007305 |
| DBxref | PFAM:PF04178 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An14 | supercontig | An14:793554..794265 + |
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