You are here

Home

CBS51388_008847-T1, CBS51388_008847-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008847-T1
Unique NameCBS51388_008847-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:854748..855946-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008847-T1 ID=CBS51388_008847-T1|Name=CBS51388_008847-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1199bp|location=Sequence derived from alignment at An14:854748..855946- (Aspergillus niger CBS 513.88)
ATGGCTCCCGTTGGTCTCCTGACTAAACTCAGGACTCTAATCACCAAGGA
CTATGGTAAACTTATGAACTATAAGATTCTTATATCTTTGTCTGACTTAT
TCCGTAGATGAGCCTGCCATTTCAACACAGACAGCCGCCTTTCTCTCGGT
ATGCATTTCTGATCATCAGCTCCTACCAACTCTCCCACGTGCTTTTGGCC
TTCTTATTGCTCTTCAGGCCAGTATCTGATTCAAGTACTAGGTTTGCCTC
ACCCTCGTCTATGTGGTTCCCTTTTATGTGAACCCGACGACCCGGCCATC
GCCCACCCTGAGTAGAGATGCGCCGTCGGTAATCCGGGCCAGAATTAGAG
CAGTGACATTTTCATGCACCATTAGCAGCCTGGTCGTCTTATGGCTAGTT
GCTGCCAAAGAAAACGCTTCTTTCTCTCGAGCTCTCCATTTCCTGGGGTG
GTGGCCTGTTGGTCTCGTGGATATCTTCCGCAGCCTGCTTCTCACAGCCA
TCCTTTTCGCCGGTCCACTGTTTGAGCGCGGTGTTGCCGAGGGCGAATGG
AGAGAGTGGATTCGGGGAGGAAGAGTCACTGCATCGCTTCGCAGCTGGAT
TGGATGGAGGAATTATGTCGCGGTAAGTCCAGTTTGCGACGGCAATGTCT
GGCTTTATGATTAACTGGGCGATGCAGGGTCCCATCACCGAGGAGGTCAT
GTTCCGCTCAGCCATCGTCCCCCTTCATCTCCTTGCCAAGGTTGATCCCG
GCCGCATTGTATTTGTGGCTCCTCTCTATTTCGGCATTGCTCACGTACAC
CATTTCTACGAGTTTCGCCTCACGCATCCTGATACATCGATTGTCGCTGC
GATATTGAGATCAGTCTTTCAATTCGGTTACACGACGATTTTCGGCTGGT
ATGCCACCTTTGTCTACCTTCGTACTGGCTCTCTTCTGGCAGTTATTCTT
GCCCACACTTTCTGCAACTGGTGCGGATTACCGCGATTGTGGGGAAGAGT
AGAGGCGGGCGTACCCATCGGGCCCCCCATGGTCAAAGGAAAAGGATCCT
CAGACGTGACATACGGTCAACTCAGTCTTGGCTGGACCGTCGCATACTAC
GTAATCCTGGTCGCGGGAGCTATTGGCTTCTTCCAAACGCTATGGCCTTT
GACAGAATCATTGAACGCATTGGCCAGCTTTTCTGGTGCGACAAAATAA
back to top

Coding sequence (CDS) from alignment at An14:854748..855946-

>CBS51388_008847-T1 ID=CBS51388_008847-T1|Name=CBS51388_008847-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3996bp|location=Sequence derived from alignment at An14:854748..855946- (Aspergillus niger CBS 513.88)
GGTCCCATCACCGAGGAGGTCATGTTCCGCTCAGCCATCGTCCCCCTTCA
TCTCCTTGCCAAGGTTGATCCCGGCCGCATTGTATTTGTGGCTCCTCTCT
ATTTCGGCATTGCTCACGTACACCATTTCTACGAGTTTCGCCTCACGCAT
CCTGATACATCGATTGTCGCTGCGATATTGAGATCAGTCTTTCAATTCGG
TTACACGACGATTTTCGGCTGGTATGCCACCTTTGTCTACCTTCGTACTG
GCTCTCTTCTGGCAGTTATTCTTGCCCACACTTTCTGCAACTGGTGCGGA
TTACCGCGATTGTGGGGAAGAGTAGAGGCGGGCGTACCCATCGGGCCCCC
CATGGTCAAAGGAAAAGGATCCTCAGACGTGACATACGGTCAACTCAGTC
TTGGCTGGACCGTCGCATACTACGTAATCCTGGTCGCGGGAGCTATTGGC
TTCTTCCAAACGCTATGGCCTTTGACAGAATCATTGAACGCATTGGCCAG
CTTTTCTGGTGCGACAAAATAAGTTTGCCTCACCCTCGTCTATGTGGTTC
CCTTTTATGTGAACCCGACGACCCGGCCATCGCCCACCCTGAGTAGAGAT
GCGCCGTCGGTAATCCGGGCCAGAATTAGAGCAGTGACATTTTCATGCAC
CATTAGCAGCCTGGTCGTCTTATGGCTAGTTGCTGCCAAAGAAAACGCTT
CTTTCTCTCGAGCTCTCCATTTCCTGGGGTGGTGGCCTGTTGGTCTCGTG
GATATCTTCCGCAGCCTGCTTCTCACAGCCATCCTTTTCGCCGGTCCACT
GTTTGAGCGCGGTGTTGCCGAGGGCGAATGGAGAGAGTGGATTCGGGGAG
GAAGAGTCACTGCATCGCTTCGCAGCTGGATTGGATGGAGGAATTATGTC
GCGATGAGCCTGCCATTTCAACACAGACAGCCGCCTTTCTCTCGATGGCT
CCCGTTGGTCTCCTGACTAAACTCAGGACTCTAATCACCAAGGACTATGG
GTCCCATCACCGAGGAGGTCATGTTCCGCTCAGCCATCGTCCCCCTTCAT
CTCCTTGCCAAGGTTGATCCCGGCCGCATTGTATTTGTGGCTCCTCTCTA
TTTCGGCATTGCTCACGTACACCATTTCTACGAGTTTCGCCTCACGCATC
CTGATACATCGATTGTCGCTGCGATATTGAGATCAGTCTTTCAATTCGGT
TACACGACGATTTTCGGCTGGTATGCCACCTTTGTCTACCTTCGTACTGG
CTCTCTTCTGGCAGTTATTCTTGCCCACACTTTCTGCAACTGGTGCGGAT
TACCGCGATTGTGGGGAAGAGTAGAGGCGGGCGTACCCATCGGGCCCCCC
ATGGTCAAAGGAAAAGGATCCTCAGACGTGACATACGGTCAACTCAGTCT
TGGCTGGACCGTCGCATACTACGTAATCCTGGTCGCGGGAGCTATTGGCT
TCTTCCAAACGCTATGGCCTTTGACAGAATCATTGAACGCATTGGCCAGC
TTTTCTGGTGCGACAAAATAAGTTTGCCTCACCCTCGTCTATGTGGTTCC
CTTTTATGTGAACCCGACGACCCGGCCATCGCCCACCCTGAGTAGAGATG
CGCCGTCGGTAATCCGGGCCAGAATTAGAGCAGTGACATTTTCATGCACC
ATTAGCAGCCTGGTCGTCTTATGGCTAGTTGCTGCCAAAGAAAACGCTTC
TTTCTCTCGAGCTCTCCATTTCCTGGGGTGGTGGCCTGTTGGTCTCGTGG
ATATCTTCCGCAGCCTGCTTCTCACAGCCATCCTTTTCGCCGGTCCACTG
TTTGAGCGCGGTGTTGCCGAGGGCGAATGGAGAGAGTGGATTCGGGGAGG
AAGAGTCACTGCATCGCTTCGCAGCTGGATTGGATGGAGGAATTATGTCG
CGATGAGCCTGCCATTTCAACACAGACAGCCGCCTTTCTCTCGATGGCTC
CCGTTGGTCTCCTGACTAAACTCAGGACTCTAATCACCAAGGACTATGGG
TCCCATCACCGAGGAGGTCATGTTCCGCTCAGCCATCGTCCCCCTTCATC
TCCTTGCCAAGGTTGATCCCGGCCGCATTGTATTTGTGGCTCCTCTCTAT
TTCGGCATTGCTCACGTACACCATTTCTACGAGTTTCGCCTCACGCATCC
TGATACATCGATTGTCGCTGCGATATTGAGATCAGTCTTTCAATTCGGTT
ACACGACGATTTTCGGCTGGTATGCCACCTTTGTCTACCTTCGTACTGGC
TCTCTTCTGGCAGTTATTCTTGCCCACACTTTCTGCAACTGGTGCGGATT
ACCGCGATTGTGGGGAAGAGTAGAGGCGGGCGTACCCATCGGGCCCCCCA
TGGTCAAAGGAAAAGGATCCTCAGACGTGACATACGGTCAACTCAGTCTT
GGCTGGACCGTCGCATACTACGTAATCCTGGTCGCGGGAGCTATTGGCTT
CTTCCAAACGCTATGGCCTTTGACAGAATCATTGAACGCATTGGCCAGCT
TTTCTGGTGCGACAAAATAAGTTTGCCTCACCCTCGTCTATGTGGTTCCC
TTTTATGTGAACCCGACGACCCGGCCATCGCCCACCCTGAGTAGAGATGC
GCCGTCGGTAATCCGGGCCAGAATTAGAGCAGTGACATTTTCATGCACCA
TTAGCAGCCTGGTCGTCTTATGGCTAGTTGCTGCCAAAGAAAACGCTTCT
TTCTCTCGAGCTCTCCATTTCCTGGGGTGGTGGCCTGTTGGTCTCGTGGA
TATCTTCCGCAGCCTGCTTCTCACAGCCATCCTTTTCGCCGGTCCACTGT
TTGAGCGCGGTGTTGCCGAGGGCGAATGGAGAGAGTGGATTCGGGGAGGA
AGAGTCACTGCATCGCTTCGCAGCTGGATTGGATGGAGGAATTATGTCGC
GATGAGCCTGCCATTTCAACACAGACAGCCGCCTTTCTCTCGATGGCTCC
CGTTGGTCTCCTGACTAAACTCAGGACTCTAATCACCAAGGACTATGGGT
CCCATCACCGAGGAGGTCATGTTCCGCTCAGCCATCGTCCCCCTTCATCT
CCTTGCCAAGGTTGATCCCGGCCGCATTGTATTTGTGGCTCCTCTCTATT
TCGGCATTGCTCACGTACACCATTTCTACGAGTTTCGCCTCACGCATCCT
GATACATCGATTGTCGCTGCGATATTGAGATCAGTCTTTCAATTCGGTTA
CACGACGATTTTCGGCTGGTATGCCACCTTTGTCTACCTTCGTACTGGCT
CTCTTCTGGCAGTTATTCTTGCCCACACTTTCTGCAACTGGTGCGGATTA
CCGCGATTGTGGGGAAGAGTAGAGGCGGGCGTACCCATCGGGCCCCCCAT
GGTCAAAGGAAAAGGATCCTCAGACGTGACATACGGTCAACTCAGTCTTG
GCTGGACCGTCGCATACTACGTAATCCTGGTCGCGGGAGCTATTGGCTTC
TTCCAAACGCTATGGCCTTTGACAGAATCATTGAACGCATTGGCCAGCTT
TTCTGGTGCGACAAAATAAGTTTGCCTCACCCTCGTCTATGTGGTTCCCT
TTTATGTGAACCCGACGACCCGGCCATCGCCCACCCTGAGTAGAGATGCG
CCGTCGGTAATCCGGGCCAGAATTAGAGCAGTGACATTTTCATGCACCAT
TAGCAGCCTGGTCGTCTTATGGCTAGTTGCTGCCAAAGAAAACGCTTCTT
TCTCTCGAGCTCTCCATTTCCTGGGGTGGTGGCCTGTTGGTCTCGTGGAT
ATCTTCCGCAGCCTGCTTCTCACAGCCATCCTTTTCGCCGGTCCACTGTT
TGAGCGCGGTGTTGCCGAGGGCGAATGGAGAGAGTGGATTCGGGGAGGAA
GAGTCACTGCATCGCTTCGCAGCTGGATTGGATGGAGGAATTATGTCGCG
ATGAGCCTGCCATTTCAACACAGACAGCCGCCTTTCTCTCGATGGCTCCC
GTTGGTCTCCTGACTAAACTCAGGACTCTAATCACCAAGGACTATG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004197cysteine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0071586CAAX-box protein processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008847CBS51388_008847Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008847-T1CBS51388_008847-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008847-T1.cdsCBS51388_008847-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008847-T1.exon4CBS51388_008847-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_008847-T1.exon3CBS51388_008847-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_008847-T1.exon2CBS51388_008847-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008847-T1.exon1CBS51388_008847-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09263IMF
NoteMEROPS:MER0004246
DBxrefInterPro:IPR003675
DBxrefPFAM:PF02517
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:854748..855946 -
Powered by Drupal