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Sequences
The following sequences are available for this feature:
mRNA from alignment at An14:903264..905396+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008866-T1 ID=CBS51388_008866-T1|Name=CBS51388_008866-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2133bp|location=Sequence derived from alignment at An14:903264..905396+ (Aspergillus niger CBS 513.88)
ATGCCTCGTGAAAAGGTCAAGAGAGGCCGTCGCGCCACCGAAAAGGCCAA
CAAGGAAGCCAGCAAGCGAAAGCGCGACGACGCCCCCGAAGATGTCGTGC
CCAAACGAGTGAAACCTTCCGACGACGAGACCAACGACTTCGTTAACGGT
GCCGATTATATCGCTCTGGACGATGGACAACAGCAGGGCGAGGAGGGAGC
GCAGACGGGCGATATGCCCTTTTATGGTCTTCTCGATCCCGAGGAGCAGG
AATACTTCTCGCGTGCAAACGAGGTGTTGGAGACCAACCAGTTCGGAGAC
GCAGAGGAGCGACGAGTCTTCGTCGAAAGTGTCTACAAGGAGGCCGAAGG
CAAGGAATTGAAGATCTCATGCAGTCAGTCGTGTTCCCGTCTTATGGAGA
AGTTGATCTCGATGTCGGACATACACCAGATCCGGAGACTGTTCAGCAAG
TTCATCGGTCATTTCCTGCACCTGGTTCAGCACCGGTTCGCCAGTCATTG
CTGTGAGACTCTTTTCATTCACGCTGCGCCCGGAGTGTCGCAAAAGCCAT
CCAAGAAGGCTAGCAAGACCGAAGCCGAGGAGGGAGACGAGCCCGAGCCC
GAACTGTCGCTGGCGGAGATGTTCATGAAGGTCATCGAGGAGTTGGAGGG
AAATTGGGGATACTTGCTGACGGAGCGGTTTGCGTCGCACACCATTCGCG
TTCTCCTGTTGGTGCTGGCAGGAGAGCCGGTCGATCTATCCTTGAGCGAC
TCGGTCGTTGCTAGTCGCAAGAAGGAAAGACACGGCGTCCTCAACGAAGT
GCAGGACGAGAACCCCGTTGCGCAGAAGCGCAGCGTGCCCGAATCGTTCG
AGGGCACCCTGAAGAAGATCATGCAGGATATGGTCTCCGTGCTCGACGAC
ACCTATCTTCGCGCACTTGCCACCCACCCCGTCGGAAACCCAGTTCTCCA
AGTCCTCGTATACCTGGAGCTCTCCCACTTCGGAAAGGCCAGCGCGAAGG
ACCCCAAGTCGATCATCCGCCGACTAATCCCCGACGATACCTTCGAAGAA
GGCACAGAAAGCACCGTCTTCATCCGCGGCCTTCTCTACGACCCCGTGGG
CTCTCGCCTTCTCGAGACCATCGTCCGATACATGCCCGGCAAGCTATTCA
AGGGTCTCTACAAGAACTTCCTGCGTGACCAGCTCCGCTCCCTGTCGCGC
AACATCACCGCCGGCTACGTCGTGCTCAAAGTCCTGGAACGTCTCGGAAA
GGACGACCTCGAAAACGCCGTGGAACTCCTCGTCCCTCAGATCCCCAACC
TCATCGAGCGCTCCCGCGTCATCGTCCCCAAGACCCTCGTCGAGCGATGC
ATCGTCCGCGGCGTCGACACCACCCCTATCGCGCGCTCCCTCGAAACCGC
CTACGACAGCGACCCCGCCAAGCGACTGTCCCAAATGCTCACTCTCGAGG
ACACAACCACCACCTCTGAACCCCAACAACAAAACCAAGCACAAGACCAA
GACGACCACCAACAACCCCCCGCAATCCCCGATTTCGGCCCCGACAACGC
CAACGCCAACATCAACACGAATCCCAAAGGCGCCAAACTCCACAACTCTC
TCTTTGTACAGACGATCCTCACAGCCCCGGGCCCGCTCAGCGCCCTCGTC
TACAGCAGCCTCCTCTCCCAAACGCCCGAATCCCTCCTCACCATCGCCAA
AGACCCCACCGCCTCCCACGTCATCCAGAAATCCCTCACTCTGCCCACCT
CGACGCCACAATTCCGGCGCCAGTTCGCCGTCCGCTTCACGGGCCATCTC
GAAGAACTGGCCCTGGATAGCAGCGGGTCCCGCGTCGTGGATGCTCTCTG
GCACGCTACGAAGGACGTGTTCTTCGTGAAGGAGCGCATGGCGCAGGAAC
TGGCGCGCAGTGAAATGGCTCTGAGGGATTCGTTTGTCGGTCGTGCGGTG
TGGCGTAATTGGTCGATGGACTTGTATAAGCGCCGCAGAGGTGAGTGGGC
GGCCAAGGCGAAGGGATTGGATGTTGGTGGCGAGGGGGGTCAGAAGCCGA
AGTCGAGGATTGAGCTGGCCAGGGAGAGGTTTGCGGCCAAGGCGGCGGAG
AGTGAGAAGAAGAAGAATGGGGAGGATGCTTAA back to topCoding sequence (CDS) from alignment at An14:903264..905396+ >CBS51388_008866-T1 ID=CBS51388_008866-T1|Name=CBS51388_008866-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2133bp|location=Sequence derived from alignment at An14:903264..905396+ (Aspergillus niger CBS 513.88)
ATGCCTCGTGAAAAGGTCAAGAGAGGCCGTCGCGCCACCGAAAAGGCCAA
CAAGGAAGCCAGCAAGCGAAAGCGCGACGACGCCCCCGAAGATGTCGTGC
CCAAACGAGTGAAACCTTCCGACGACGAGACCAACGACTTCGTTAACGGT
GCCGATTATATCGCTCTGGACGATGGACAACAGCAGGGCGAGGAGGGAGC
GCAGACGGGCGATATGCCCTTTTATGGTCTTCTCGATCCCGAGGAGCAGG
AATACTTCTCGCGTGCAAACGAGGTGTTGGAGACCAACCAGTTCGGAGAC
GCAGAGGAGCGACGAGTCTTCGTCGAAAGTGTCTACAAGGAGGCCGAAGG
CAAGGAATTGAAGATCTCATGCAGTCAGTCGTGTTCCCGTCTTATGGAGA
AGTTGATCTCGATGTCGGACATACACCAGATCCGGAGACTGTTCAGCAAG
TTCATCGGTCATTTCCTGCACCTGGTTCAGCACCGGTTCGCCAGTCATTG
CTGTGAGACTCTTTTCATTCACGCTGCGCCCGGAGTGTCGCAAAAGCCAT
CCAAGAAGGCTAGCAAGACCGAAGCCGAGGAGGGAGACGAGCCCGAGCCC
GAACTGTCGCTGGCGGAGATGTTCATGAAGGTCATCGAGGAGTTGGAGGG
AAATTGGGGATACTTGCTGACGGAGCGGTTTGCGTCGCACACCATTCGCG
TTCTCCTGTTGGTGCTGGCAGGAGAGCCGGTCGATCTATCCTTGAGCGAC
TCGGTCGTTGCTAGTCGCAAGAAGGAAAGACACGGCGTCCTCAACGAAGT
GCAGGACGAGAACCCCGTTGCGCAGAAGCGCAGCGTGCCCGAATCGTTCG
AGGGCACCCTGAAGAAGATCATGCAGGATATGGTCTCCGTGCTCGACGAC
ACCTATCTTCGCGCACTTGCCACCCACCCCGTCGGAAACCCAGTTCTCCA
AGTCCTCGTATACCTGGAGCTCTCCCACTTCGGAAAGGCCAGCGCGAAGG
ACCCCAAGTCGATCATCCGCCGACTAATCCCCGACGATACCTTCGAAGAA
GGCACAGAAAGCACCGTCTTCATCCGCGGCCTTCTCTACGACCCCGTGGG
CTCTCGCCTTCTCGAGACCATCGTCCGATACATGCCCGGCAAGCTATTCA
AGGGTCTCTACAAGAACTTCCTGCGTGACCAGCTCCGCTCCCTGTCGCGC
AACATCACCGCCGGCTACGTCGTGCTCAAAGTCCTGGAACGTCTCGGAAA
GGACGACCTCGAAAACGCCGTGGAACTCCTCGTCCCTCAGATCCCCAACC
TCATCGAGCGCTCCCGCGTCATCGTCCCCAAGACCCTCGTCGAGCGATGC
ATCGTCCGCGGCGTCGACACCACCCCTATCGCGCGCTCCCTCGAAACCGC
CTACGACAGCGACCCCGCCAAGCGACTGTCCCAAATGCTCACTCTCGAGG
ACACAACCACCACCTCTGAACCCCAACAACAAAACCAAGCACAAGACCAA
GACGACCACCAACAACCCCCCGCAATCCCCGATTTCGGCCCCGACAACGC
CAACGCCAACATCAACACGAATCCCAAAGGCGCCAAACTCCACAACTCTC
TCTTTGTACAGACGATCCTCACAGCCCCGGGCCCGCTCAGCGCCCTCGTC
TACAGCAGCCTCCTCTCCCAAACGCCCGAATCCCTCCTCACCATCGCCAA
AGACCCCACCGCCTCCCACGTCATCCAGAAATCCCTCACTCTGCCCACCT
CGACGCCACAATTCCGGCGCCAGTTCGCCGTCCGCTTCACGGGCCATCTC
GAAGAACTGGCCCTGGATAGCAGCGGGTCCCGCGTCGTGGATGCTCTCTG
GCACGCTACGAAGGACGTGTTCTTCGTGAAGGAGCGCATGGCGCAGGAAC
TGGCGCGCAGTGAAATGGCTCTGAGGGATTCGTTTGTCGGTCGTGCGGTG
TGGCGTAATTGGTCGATGGACTTGTATAAGCGCCGCAGAGGTGAGTGGGC
GGCCAAGGCGAAGGGATTGGATGTTGGTGGCGAGGGGGGTCAGAAGCCGA
AGTCGAGGATTGAGCTGGCCAGGGAGAGGTTTGCGGCCAAGGCGGCGGAG
AGTGAGAAGAAGAAGAATGGGGAGGATGCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261BPJ |
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR011989 |
| DBxref | InterPro:IPR001313 |
| DBxref | PFAM:PF00806 |
| Product | Nucleolar protein 9 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An14 | supercontig | An14:903264..905396 + |
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