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CBS51388_008896-T1, CBS51388_008896-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008896-T1
Unique NameCBS51388_008896-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:987778..990149+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008896-T1 ID=CBS51388_008896-T1|Name=CBS51388_008896-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2372bp|location=Sequence derived from alignment at An14:987778..990149+ (Aspergillus niger CBS 513.88)
ATGGCCGATACCGAACCTCGCAAACGTCGCCGGCCCGCCAAATCGTGTGA
GCAATGCCGCCAACGCAAGGTCCGCTGTGACCGTAATGTGCCCTGTGGAC
CTTGCACACGAGCTCGCTCATCTCTGGGCTGCTCTTATCGCCGGGATAGT
CGTTTTTCGACACCGACTGATCACCAAGCGTCTCCCATTATCTCGCGTGA
GCCGCAGCGCAATGCACGGAGCTACCCGCTGCCATCTGGGATGCCAGAGG
GCTCAACGGGGTCCCTGGGCGAGACACTGCACATCGAACCTAGATGTGGT
AGCAAAGAATGCATTTCGTCGCAGCTTGGATCAACGATCCGTGATCTCCA
GCTCCGTCTACAGCGCCTGGAGGAACGACTAACCGACACGGACATAGTAC
GGCCATCGGCCCCGGAACCTGATATCCAGCAGGCACTTCGAGAGCTGTGC
GACAAGGTCCAGAGACTAGAACAGCGGCTACTATCATGCACGGATTCACC
TCAAGCACCGAAGGGAGAACTATCCATTGCTGCAACGCCTCCTCGACTGC
ACACCAGTTCGAGGAAGATGAAGCTGTTCGGTCCGACTCATTACATGCAC
ACGATGGATAAGGTGCTAGCCCTGCCTCTATTTAGACTTGGATGAAGACT
AATTATCCGTAGCTCCAACTCGTAGGCTCACTGGAAACCAGGGGGCCCCA
GCCATTATGCCCCGAGCTCAAGGCAGAGCTGACTGCTCGGACCAAAGAGC
TCCGTCTTCTCCGCGGATCAGTCAAGGCAGCACAGAGTCCCCGGCTGAAT
GACCCTGTGCCAGACTTGCTCTCTACCATCCCAACCAGATCCGTATGCGA
TGAGCTGGTGCAATGCTACCTGCGGACGTTCGAACGCGTCTATCGCATCG
TGCACATACCATCCTTCAATAAGGAATATCAGCAGTTCTGGGACCAACCT
CTAGCAGCTCCTACTCCATTCCTCATGAAGCTGGCATTGATCCTCGCTAT
AGGCACGACCTTCCACCCACAGCGAGGCAAAGCCGGCAAAGAATACGATA
CCCGACTCATCCAGACCTGGATCTACGCCGCCCAGTGGTGGCTCACAGGA
CCAGCCGAAAAGAACACATTCAACCTGGACGGACTCCAGATCTTCTGCCT
ACTCCTACTCGCCCGCCAAATGGGATCCCCAGGCCCATCTCTATACCTCT
CAGCCGGCTACCTCCTACAGACAGCCACAGCCATGGGCCTGCACCGAGAC
TCGGCCTACTTCCCATTTCTCCCACCATTCCAATCCGAAATGCGAGCTCG
TCTCTGGGCCACCGTTCTCGAACTGACCCTTCAGTCCTCGCTCGACTCCG
CCTCCCCTATCACGATCCCATACTTCGACACCAAGCCCCCATCCAACTTC
AACGACACCGACATCAACCCAGACATCAAGCCACTCCCCAACCCCCACCC
CAGCACCACCCACACAGACACATCCCTCCAACTCCTCCTCAACGCCTCGT
TCTCCCTACGCGCCGAAACCATCCACCTCATCCACAGCCCCGACAGAATC
CCTTATCAAAAGGCCCTCTACCTCGCCACCAAACTACGAACAACCTGCCA
CACCATCACCACCTTCTTCCAATCCAACACCACCACCATCACCACATCCC
CATTCCACAAATCCCACCTGCTCACAACTCTAAACCGCTACATCCTCCAC
CTGCACCTCCCCTTCGCCCACGCCGCCTCAACCACCCCACAATACCACTA
TTCCCGCAAACTATGCCTCGAATCCGCCCTCACAATTGCCTCTTTCGCCC
CATCCTCCTCCACTTCAATCCCAATACCCCTCGACGACTTCCCCCTCCTA
ACCCTCACAGCCCGCGGGCCCCTCCGCGGCCCCCTAAACCTCGACATAAT
CTGCACGCTGGCCCTAGAACTCATCACCCAGATAGAGGAGGCCCCAGCAG
TCCCAAATACTACTACAGCACCTAATCCTCTAACCCTCCTATCATCTACA
ATACGAGCCCCCATCCTCCAAACGCTCGAGAATCTTGCCCTGCAGAGCGC
ACACGTCCTCAGGATGCATGGTAAGTCGCCGGCGCTGAAACGGTATATTA
TTTCTGAGGCGCTGGTGGCGCAGATTAGGGCTTTAGAGGATGGTGGTGGT
GGGGGGGATGTGCAGGGTGTGGTGTATGAGGCTGTGAGGGGGTGTTTGCG
GGAAGGGGTGGGGATGTTGAAAGGGATGGAGAGGGAGGGTAGAGATGGAG
ATGGAGATGTTGGTTCGTTGGGAATGGGGATGATGGTCACGCCGGATAGT
GCTGGTGGTGCTGTTGGGGGGTCGGATGGGATGGGGTTGGGGATTGGGAT
TGGAATGGTGAGTCTAATCTGA
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Coding sequence (CDS) from alignment at An14:987778..990149+

>CBS51388_008896-T1 ID=CBS51388_008896-T1|Name=CBS51388_008896-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4644bp|location=Sequence derived from alignment at An14:987778..990149+ (Aspergillus niger CBS 513.88)
ATGGCCGATACCGAACCTCGCAAACGTCGCCGGCCCGCCAAATCGTGTGA
GCAATGCCGCCAACGCAAGGTCCGCTGTGACCGTAATGTGCCCTGTGGAC
CTTGCACACGAGCTCGCTCATCTCTGGGCTGCTCTTATCGCCGGGATAGT
CGTTTTTCGACACCGACTGATCACCAAGCGTCTCCCATTATCTCGCGTGA
GCCGCAGCGCAATGCACGGAGCTACCCGCTGCCATCTGGGATGCCAGAGG
GCTCAACGGGGTCCCTGGGCGAGACACTGCACATCGAACCTAGATGTGGT
AGCAAAGAATGCATTTCGTCGCAGCTTGGATCAACGATCCGTGATCTCCA
GCTCCGTCTACAGCGCCTGGAGGAACGACTAACCGACACGGACATAGTAC
GGCCATCGGCCCCGGAACCTGATATCCAGCAGGCACTTCGAGAGCTGTGC
GACAAGGTCCAGAGACTAGAACAGCGGCTACTATCATGCACGGATTCACC
TCAAGCACCGAAGGGAGAACTATCCATTGCTGCAACGCCTCCTCGACTGC
ACACCAGTTCGAGGAAGATGAAGCTGTTCGGTCCGACTCATTACATGCAC
ACGATGGATAAGCTCCAACTCGTAGGCTCACTGGAAACCAGGGGGCCCCA
GCCATTATGCCCCGAGCTCAAGGCAGAGCTGACTGCTCGGACCAAAGAGC
TCCGTCTTCTCCGCGGATCAGTCAAGGCAGCACAGAGTCCCCGGCTGAAT
GACCCTGTGCCAGACTTGCTCTCTACCATCCCAACCAGATCCGTATGCGA
TGAGCTGGTGCAATGCTACCTGCGGACGTTCGAACGCGTCTATCGCATCG
TGCACATACCATCCTTCAATAAGGAATATCAGCAGTTCTGGGACCAACCT
CTAGCAGCTCCTACTCCATTCCTCATGAAGCTGGCATTGATCCTCGCTAT
AGGCACGACCTTCCACCCACAGCGAGGCAAAGCCGGCAAAGAATACGATA
CCCGACTCATCCAGACCTGGATCTACGCCGCCCAGTGGTGGCTCACAGGA
CCAGCCGAAAAGAACACATTCAACCTGGACGGACTCCAGATCTTCTGCCT
ACTCCTACTCGCCCGCCAAATGGGATCCCCAGGCCCATCTCTATACCTCT
CAGCCGGCTACCTCCTACAGACAGCCACAGCCATGGGCCTGCACCGAGAC
TCGGCCTACTTCCCATTTCTCCCACCATTCCAATCCGAAATGCGAGCTCG
TCTCTGGGCCACCGTTCTCGAACTGACCCTTCAGTCCTCGCTCGACTCCG
CCTCCCCTATCACGATCCCATACTTCGACACCAAGCCCCCATCCAACTTC
AACGACACCGACATCAACCCAGACATCAAGCCACTCCCCAACCCCCACCC
CAGCACCACCCACACAGACACATCCCTCCAACTCCTCCTCAACGCCTCGT
TCTCCCTACGCGCCGAAACCATCCACCTCATCCACAGCCCCGACAGAATC
CCTTATCAAAAGGCCCTCTACCTCGCCACCAAACTACGAACAACCTGCCA
CACCATCACCACCTTCTTCCAATCCAACACCACCACCATCACCACATCCC
CATTCCACAAATCCCACCTGCTCACAACTCTAAACCGCTACATCCTCCAC
CTGCACCTCCCCTTCGCCCACGCCGCCTCAACCACCCCACAATACCACTA
TTCCCGCAAACTATGCCTCGAATCCGCCCTCACAATTGCCTCTTTCGCCC
CATCCTCCTCCACTTCAATCCCAATACCCCTCGACGACTTCCCCCTCCTA
ACCCTCACAGCCCGCGGGCCCCTCCGCGGCCCCCTAAACCTCGACATAAT
CTGCACGCTGGCCCTAGAACTCATCACCCAGATAGAGGAGGCCCCAGCAG
TCCCAAATACTACTACAGCACCTAATCCTCTAACCCTCCTATCATCTACA
ATACGAGCCCCCATCCTCCAAACGCTCGAGAATCTTGCCCTGCAGAGCGC
ACACGTCCTCAGGATGCATGGTAAGTCGCCGGCGCTGAAACGGTATATTA
TTTCTGAGGCGCTGGTGGCGCAGATTAGGGCTTTAGAGGATGGTGGTGGT
GGGGGGGATGTGCAGGGTGTGGTGTATGAGGCTGTGAGGGGGTGTTTGCG
GGAAGGGGTGGGGATGTTGAAAGGGATGGAGAGGGAGGGTAGAGATGGAG
ATGGAGATGTTGGTTCGTTGGGAATGGGGATGATGGTCACGCCGGATAGT
GCTGGTGGTGCTGTTGGGGGGTCGGATGGGATGGGGTTGGGGATTGGGAT
TGGAATGGTGAGTCTAATCTGAATGGCCGATACCGAACCTCGCAAACGTC
GCCGGCCCGCCAAATCGTGTGAGCAATGCCGCCAACGCAAGGTCCGCTGT
GACCGTAATGTGCCCTGTGGACCTTGCACACGAGCTCGCTCATCTCTGGG
CTGCTCTTATCGCCGGGATAGTCGTTTTTCGACACCGACTGATCACCAAG
CGTCTCCCATTATCTCGCGTGAGCCGCAGCGCAATGCACGGAGCTACCCG
CTGCCATCTGGGATGCCAGAGGGCTCAACGGGGTCCCTGGGCGAGACACT
GCACATCGAACCTAGATGTGGTAGCAAAGAATGCATTTCGTCGCAGCTTG
GATCAACGATCCGTGATCTCCAGCTCCGTCTACAGCGCCTGGAGGAACGA
CTAACCGACACGGACATAGTACGGCCATCGGCCCCGGAACCTGATATCCA
GCAGGCACTTCGAGAGCTGTGCGACAAGGTCCAGAGACTAGAACAGCGGC
TACTATCATGCACGGATTCACCTCAAGCACCGAAGGGAGAACTATCCATT
GCTGCAACGCCTCCTCGACTGCACACCAGTTCGAGGAAGATGAAGCTGTT
CGGTCCGACTCATTACATGCACACGATGGATAAGCTCCAACTCGTAGGCT
CACTGGAAACCAGGGGGCCCCAGCCATTATGCCCCGAGCTCAAGGCAGAG
CTGACTGCTCGGACCAAAGAGCTCCGTCTTCTCCGCGGATCAGTCAAGGC
AGCACAGAGTCCCCGGCTGAATGACCCTGTGCCAGACTTGCTCTCTACCA
TCCCAACCAGATCCGTATGCGATGAGCTGGTGCAATGCTACCTGCGGACG
TTCGAACGCGTCTATCGCATCGTGCACATACCATCCTTCAATAAGGAATA
TCAGCAGTTCTGGGACCAACCTCTAGCAGCTCCTACTCCATTCCTCATGA
AGCTGGCATTGATCCTCGCTATAGGCACGACCTTCCACCCACAGCGAGGC
AAAGCCGGCAAAGAATACGATACCCGACTCATCCAGACCTGGATCTACGC
CGCCCAGTGGTGGCTCACAGGACCAGCCGAAAAGAACACATTCAACCTGG
ACGGACTCCAGATCTTCTGCCTACTCCTACTCGCCCGCCAAATGGGATCC
CCAGGCCCATCTCTATACCTCTCAGCCGGCTACCTCCTACAGACAGCCAC
AGCCATGGGCCTGCACCGAGACTCGGCCTACTTCCCATTTCTCCCACCAT
TCCAATCCGAAATGCGAGCTCGTCTCTGGGCCACCGTTCTCGAACTGACC
CTTCAGTCCTCGCTCGACTCCGCCTCCCCTATCACGATCCCATACTTCGA
CACCAAGCCCCCATCCAACTTCAACGACACCGACATCAACCCAGACATCA
AGCCACTCCCCAACCCCCACCCCAGCACCACCCACACAGACACATCCCTC
CAACTCCTCCTCAACGCCTCGTTCTCCCTACGCGCCGAAACCATCCACCT
CATCCACAGCCCCGACAGAATCCCTTATCAAAAGGCCCTCTACCTCGCCA
CCAAACTACGAACAACCTGCCACACCATCACCACCTTCTTCCAATCCAAC
ACCACCACCATCACCACATCCCCATTCCACAAATCCCACCTGCTCACAAC
TCTAAACCGCTACATCCTCCACCTGCACCTCCCCTTCGCCCACGCCGCCT
CAACCACCCCACAATACCACTATTCCCGCAAACTATGCCTCGAATCCGCC
CTCACAATTGCCTCTTTCGCCCCATCCTCCTCCACTTCAATCCCAATACC
CCTCGACGACTTCCCCCTCCTAACCCTCACAGCCCGCGGGCCCCTCCGCG
GCCCCCTAAACCTCGACATAATCTGCACGCTGGCCCTAGAACTCATCACC
CAGATAGAGGAGGCCCCAGCAGTCCCAAATACTACTACAGCACCTAATCC
TCTAACCCTCCTATCATCTACAATACGAGCCCCCATCCTCCAAACGCTCG
AGAATCTTGCCCTGCAGAGCGCACACGTCCTCAGGATGCATGGTAAGTCG
CCGGCGCTGAAACGGTATATTATTTCTGAGGCGCTGGTGGCGCAGATTAG
GGCTTTAGAGGATGGTGGTGGTGGGGGGGATGTGCAGGGTGTGGTGTATG
AGGCTGTGAGGGGGTGTTTGCGGGAAGGGGTGGGGATGTTGAAAGGGATG
GAGAGGGAGGGTAGAGATGGAGATGGAGATGTTGGTTCGTTGGGAATGGG
GATGATGGTCACGCCGGATAGTGCTGGTGGTGCTGTTGGGGGGTCGGATG
GGATGGGGTTGGGGATTGGGATTGGAATGGTGAGTCTAATCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008896CBS51388_008896Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008896-T1.exon1CBS51388_008896-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_008896-T1.exon2CBS51388_008896-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008896-T1.cdsCBS51388_008896-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008896-T1CBS51388_008896-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:987778..990149 +
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