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Sequences
The following sequences are available for this feature:
mRNA from alignment at An14:1017552..1018319+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008908-T1 ID=CBS51388_008908-T1|Name=CBS51388_008908-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=768bp|location=Sequence derived from alignment at An14:1017552..1018319+ (Aspergillus niger CBS 513.88) ATGTCTGTGAGTAATACTCGCCCGTGTGTTCCCCTCTCAGGGCTAACCGT
TTATTTCCCTGCCTTGTAGCTCGCGTCTGGGTATGTTCCTGACTGCTTCT
GATCTCCGCATGTGTCTTCGACCATCCCTACAATATCGGGAACTCGACGA
TGACAACCGAATAAGGCTGACTAAGTTACGGAGGACAGTGTTTCCATCAC
CGATGAGTGCATCACCGCATTCAACGAGTTCCGCATGAGCGGCAACAGCA
GGGGAAGCAAGACGAAGTTCATCATCTTTAAGATCGCCGACAACAAGAAG
GAGGTTGTCATCGACGAGGTTTCCCAGGACGAGGACTACGAGGTCTTCCG
CGAAAAGCTCGCGGCCGCTAAGGATGCTAAGGGCAACCCCGCTCCCCGTT
ATGCAGTTTACGACGTCGAGTACGACCTGGGCGGTGGTGAAGGCAAGAGG
TATGATGATGATGACGATAGCCGAACGTTTACTTTAGCATATCTGCTCAC
TTTCTTCTCACCACAGGAGCAAGATCATCTTCATTTCCTGGGTTCCCAGC
GACACCGCTACCCTCGTACGTTCCGCACCGTCTCAGTTGTTCAAGCCCCC
AAATCATTGCTGACACCGATGAAACAGTGGTCCATGATCTACGCCAGCAC
TCGCGAGAACCTGAAGAACGCCCTCAACATCCACACCTCCATCCACGCCG
ACGACAAGTCCGACATCGAGTGGAAGACCGTCCTGGCCGAGGCCAGCGGT
GGTAAGGCTGGCAAATAA back to topCoding sequence (CDS) from alignment at An14:1017552..1018319+ >CBS51388_008908-T1 ID=CBS51388_008908-T1|Name=CBS51388_008908-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2340bp|location=Sequence derived from alignment at An14:1017552..1018319+ (Aspergillus niger CBS 513.88) ATGTCTCTCGCGTCTGGTGTTTCCATCACCGATGAGTGCATCACCGCATT CAACGAGTTCCGCATGAGCGGCAACAGCAGGGGAAGCAAGACGAAGTTCA TCATCTTTAAGATCGCCGACAACAAGAAGGAGGTTGTCATCGACGAGGTT TCCCAGGACGAGGACTACGAGGTCTTCCGCGAAAAGCTCGCGGCCGCTAA GGATGCTAAGGGCAACCCCGCTCCCCGTTATGCAGTTTACGACGTCGAGT ACGACCTGGGCGGTGGTGAAGGCAAGAGGAGCAAGATCATCTTCATTTCC TGGGTTCCCAGCGACACCGCTACCCTCTGGTCCATGATCTACGCCAGCAC TCGCGAGAACCTGAAGAACGCCCTCAACATCCACACCTCCATCCACGCCG ACGACAAGTCCGACATCGAGTGGAAGACCGTCCTGGCCGAGGCCAGCGGT GGTAAGGCTGGCAAATAAATGTCTCTCGCGTCTGGTGTTTCCATCACCGA TGAGTGCATCACCGCATTCAACGAGTTCCGCATGAGCGGCAACAGCAGGG GAAGCAAGACGAAGTTCATCATCTTTAAGATCGCCGACAACAAGAAGGAG GTTGTCATCGACGAGGTTTCCCAGGACGAGGACTACGAGGTCTTCCGCGA AAAGCTCGCGGCCGCTAAGGATGCTAAGGGCAACCCCGCTCCCCGTTATG CAGTTTACGACGTCGAGTACGACCTGGGCGGTGGTGAAGGCAAGAGGAGC AAGATCATCTTCATTTCCTGGGTTCCCAGCGACACCGCTACCCTCTGGTC CATGATCTACGCCAGCACTCGCGAGAACCTGAAGAACGCCCTCAACATCC ACACCTCCATCCACGCCGACGACAAGTCCGACATCGAGTGGAAGACCGTC CTGGCCGAGGCCAGCGGTGGTAAGGCTGGCAAATAAATGTCTCTCGCGTC TGGTGTTTCCATCACCGATGAGTGCATCACCGCATTCAACGAGTTCCGCA TGAGCGGCAACAGCAGGGGAAGCAAGACGAAGTTCATCATCTTTAAGATC GCCGACAACAAGAAGGAGGTTGTCATCGACGAGGTTTCCCAGGACGAGGA CTACGAGGTCTTCCGCGAAAAGCTCGCGGCCGCTAAGGATGCTAAGGGCA ACCCCGCTCCCCGTTATGCAGTTTACGACGTCGAGTACGACCTGGGCGGT GGTGAAGGCAAGAGGAGCAAGATCATCTTCATTTCCTGGGTTCCCAGCGA CACCGCTACCCTCTGGTCCATGATCTACGCCAGCACTCGCGAGAACCTGA AGAACGCCCTCAACATCCACACCTCCATCCACGCCGACGACAAGTCCGAC ATCGAGTGGAAGACCGTCCTGGCCGAGGCCAGCGGTGGTAAGGCTGGCAA ATAAATGTCTCTCGCGTCTGGTGTTTCCATCACCGATGAGTGCATCACCG CATTCAACGAGTTCCGCATGAGCGGCAACAGCAGGGGAAGCAAGACGAAG TTCATCATCTTTAAGATCGCCGACAACAAGAAGGAGGTTGTCATCGACGA GGTTTCCCAGGACGAGGACTACGAGGTCTTCCGCGAAAAGCTCGCGGCCG CTAAGGATGCTAAGGGCAACCCCGCTCCCCGTTATGCAGTTTACGACGTC GAGTACGACCTGGGCGGTGGTGAAGGCAAGAGGAGCAAGATCATCTTCAT TTCCTGGGTTCCCAGCGACACCGCTACCCTCTGGTCCATGATCTACGCCA GCACTCGCGAGAACCTGAAGAACGCCCTCAACATCCACACCTCCATCCAC GCCGACGACAAGTCCGACATCGAGTGGAAGACCGTCCTGGCCGAGGCCAG CGGTGGTAAGGCTGGCAAATAAATGTCTCTCGCGTCTGGTGTTTCCATCA CCGATGAGTGCATCACCGCATTCAACGAGTTCCGCATGAGCGGCAACAGC AGGGGAAGCAAGACGAAGTTCATCATCTTTAAGATCGCCGACAACAAGAA GGAGGTTGTCATCGACGAGGTTTCCCAGGACGAGGACTACGAGGTCTTCC GCGAAAAGCTCGCGGCCGCTAAGGATGCTAAGGGCAACCCCGCTCCCCGT TATGCAGTTTACGACGTCGAGTACGACCTGGGCGGTGGTGAAGGCAAGAG GAGCAAGATCATCTTCATTTCCTGGGTTCCCAGCGACACCGCTACCCTCT GGTCCATGATCTACGCCAGCACTCGCGAGAACCTGAAGAACGCCCTCAAC ATCCACACCTCCATCCACGCCGACGACAAGTCCGACATCGAGTGGAAGAC CGTCCTGGCCGAGGCCAGCGGTGGTAAGGCTGGCAAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0015629 | actin cytoskeleton |
Vocabulary: Biological Process
Term | Definition |
GO:0030042 | actin filament depolymerization |
Vocabulary: Molecular Function
Term | Definition |
GO:0003779 | actin binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR017904 |
DBxref | InterPro:IPR029006 |
DBxref | InterPro:IPR002108 |
DBxref | PFAM:PF00241 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
An14 | supercontig | An14:1017552..1018319 + |
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