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CBS51388_008908-T1, CBS51388_008908-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008908-T1
Unique NameCBS51388_008908-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:1017552..1018319+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008908-T1 ID=CBS51388_008908-T1|Name=CBS51388_008908-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=768bp|location=Sequence derived from alignment at An14:1017552..1018319+ (Aspergillus niger CBS 513.88)
ATGTCTGTGAGTAATACTCGCCCGTGTGTTCCCCTCTCAGGGCTAACCGT
TTATTTCCCTGCCTTGTAGCTCGCGTCTGGGTATGTTCCTGACTGCTTCT
GATCTCCGCATGTGTCTTCGACCATCCCTACAATATCGGGAACTCGACGA
TGACAACCGAATAAGGCTGACTAAGTTACGGAGGACAGTGTTTCCATCAC
CGATGAGTGCATCACCGCATTCAACGAGTTCCGCATGAGCGGCAACAGCA
GGGGAAGCAAGACGAAGTTCATCATCTTTAAGATCGCCGACAACAAGAAG
GAGGTTGTCATCGACGAGGTTTCCCAGGACGAGGACTACGAGGTCTTCCG
CGAAAAGCTCGCGGCCGCTAAGGATGCTAAGGGCAACCCCGCTCCCCGTT
ATGCAGTTTACGACGTCGAGTACGACCTGGGCGGTGGTGAAGGCAAGAGG
TATGATGATGATGACGATAGCCGAACGTTTACTTTAGCATATCTGCTCAC
TTTCTTCTCACCACAGGAGCAAGATCATCTTCATTTCCTGGGTTCCCAGC
GACACCGCTACCCTCGTACGTTCCGCACCGTCTCAGTTGTTCAAGCCCCC
AAATCATTGCTGACACCGATGAAACAGTGGTCCATGATCTACGCCAGCAC
TCGCGAGAACCTGAAGAACGCCCTCAACATCCACACCTCCATCCACGCCG
ACGACAAGTCCGACATCGAGTGGAAGACCGTCCTGGCCGAGGCCAGCGGT
GGTAAGGCTGGCAAATAA
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Coding sequence (CDS) from alignment at An14:1017552..1018319+

>CBS51388_008908-T1 ID=CBS51388_008908-T1|Name=CBS51388_008908-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2340bp|location=Sequence derived from alignment at An14:1017552..1018319+ (Aspergillus niger CBS 513.88)
ATGTCTCTCGCGTCTGGTGTTTCCATCACCGATGAGTGCATCACCGCATT
CAACGAGTTCCGCATGAGCGGCAACAGCAGGGGAAGCAAGACGAAGTTCA
TCATCTTTAAGATCGCCGACAACAAGAAGGAGGTTGTCATCGACGAGGTT
TCCCAGGACGAGGACTACGAGGTCTTCCGCGAAAAGCTCGCGGCCGCTAA
GGATGCTAAGGGCAACCCCGCTCCCCGTTATGCAGTTTACGACGTCGAGT
ACGACCTGGGCGGTGGTGAAGGCAAGAGGAGCAAGATCATCTTCATTTCC
TGGGTTCCCAGCGACACCGCTACCCTCTGGTCCATGATCTACGCCAGCAC
TCGCGAGAACCTGAAGAACGCCCTCAACATCCACACCTCCATCCACGCCG
ACGACAAGTCCGACATCGAGTGGAAGACCGTCCTGGCCGAGGCCAGCGGT
GGTAAGGCTGGCAAATAAATGTCTCTCGCGTCTGGTGTTTCCATCACCGA
TGAGTGCATCACCGCATTCAACGAGTTCCGCATGAGCGGCAACAGCAGGG
GAAGCAAGACGAAGTTCATCATCTTTAAGATCGCCGACAACAAGAAGGAG
GTTGTCATCGACGAGGTTTCCCAGGACGAGGACTACGAGGTCTTCCGCGA
AAAGCTCGCGGCCGCTAAGGATGCTAAGGGCAACCCCGCTCCCCGTTATG
CAGTTTACGACGTCGAGTACGACCTGGGCGGTGGTGAAGGCAAGAGGAGC
AAGATCATCTTCATTTCCTGGGTTCCCAGCGACACCGCTACCCTCTGGTC
CATGATCTACGCCAGCACTCGCGAGAACCTGAAGAACGCCCTCAACATCC
ACACCTCCATCCACGCCGACGACAAGTCCGACATCGAGTGGAAGACCGTC
CTGGCCGAGGCCAGCGGTGGTAAGGCTGGCAAATAAATGTCTCTCGCGTC
TGGTGTTTCCATCACCGATGAGTGCATCACCGCATTCAACGAGTTCCGCA
TGAGCGGCAACAGCAGGGGAAGCAAGACGAAGTTCATCATCTTTAAGATC
GCCGACAACAAGAAGGAGGTTGTCATCGACGAGGTTTCCCAGGACGAGGA
CTACGAGGTCTTCCGCGAAAAGCTCGCGGCCGCTAAGGATGCTAAGGGCA
ACCCCGCTCCCCGTTATGCAGTTTACGACGTCGAGTACGACCTGGGCGGT
GGTGAAGGCAAGAGGAGCAAGATCATCTTCATTTCCTGGGTTCCCAGCGA
CACCGCTACCCTCTGGTCCATGATCTACGCCAGCACTCGCGAGAACCTGA
AGAACGCCCTCAACATCCACACCTCCATCCACGCCGACGACAAGTCCGAC
ATCGAGTGGAAGACCGTCCTGGCCGAGGCCAGCGGTGGTAAGGCTGGCAA
ATAAATGTCTCTCGCGTCTGGTGTTTCCATCACCGATGAGTGCATCACCG
CATTCAACGAGTTCCGCATGAGCGGCAACAGCAGGGGAAGCAAGACGAAG
TTCATCATCTTTAAGATCGCCGACAACAAGAAGGAGGTTGTCATCGACGA
GGTTTCCCAGGACGAGGACTACGAGGTCTTCCGCGAAAAGCTCGCGGCCG
CTAAGGATGCTAAGGGCAACCCCGCTCCCCGTTATGCAGTTTACGACGTC
GAGTACGACCTGGGCGGTGGTGAAGGCAAGAGGAGCAAGATCATCTTCAT
TTCCTGGGTTCCCAGCGACACCGCTACCCTCTGGTCCATGATCTACGCCA
GCACTCGCGAGAACCTGAAGAACGCCCTCAACATCCACACCTCCATCCAC
GCCGACGACAAGTCCGACATCGAGTGGAAGACCGTCCTGGCCGAGGCCAG
CGGTGGTAAGGCTGGCAAATAAATGTCTCTCGCGTCTGGTGTTTCCATCA
CCGATGAGTGCATCACCGCATTCAACGAGTTCCGCATGAGCGGCAACAGC
AGGGGAAGCAAGACGAAGTTCATCATCTTTAAGATCGCCGACAACAAGAA
GGAGGTTGTCATCGACGAGGTTTCCCAGGACGAGGACTACGAGGTCTTCC
GCGAAAAGCTCGCGGCCGCTAAGGATGCTAAGGGCAACCCCGCTCCCCGT
TATGCAGTTTACGACGTCGAGTACGACCTGGGCGGTGGTGAAGGCAAGAG
GAGCAAGATCATCTTCATTTCCTGGGTTCCCAGCGACACCGCTACCCTCT
GGTCCATGATCTACGCCAGCACTCGCGAGAACCTGAAGAACGCCCTCAAC
ATCCACACCTCCATCCACGCCGACGACAAGTCCGACATCGAGTGGAAGAC
CGTCCTGGCCGAGGCCAGCGGTGGTAAGGCTGGCAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
Vocabulary: Biological Process
TermDefinition
GO:0030042actin filament depolymerization
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008908CBS51388_008908Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008908-T1CBS51388_008908-T1-proteinAspergillus niger CBS 513.88polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008908-T1.exon1CBS51388_008908-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_008908-T1.exon2CBS51388_008908-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008908-T1.exon3CBS51388_008908-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_008908-T1.exon4CBS51388_008908-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_008908-T1.exon5CBS51388_008908-T1.exon5Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008908-T1.cdsCBS51388_008908-T1.cdsAspergillus niger CBS 513.88CDS


Properties
Property NameValue
DBxrefInterPro:IPR017904
DBxrefInterPro:IPR029006
DBxrefInterPro:IPR002108
DBxrefPFAM:PF00241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:1017552..1018319 +
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