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Sequences
The following sequences are available for this feature:
mRNA from alignment at An14:1024872..1026727- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008911-T1 ID=CBS51388_008911-T1|Name=CBS51388_008911-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1856bp|location=Sequence derived from alignment at An14:1024872..1026727- (Aspergillus niger CBS 513.88)
ATGCTTCTCGACAAGCTCTCTGTTCTCTCTTTCCTGGGCCTGGCGCCCAT
CTTTGCTGCTGCGCAGCTCTCCGGTTCCGTGGGACCGCTGACATCCGCGT
CCACCAAGGCAGCTACCAAGACTTGCAACGTTTTGGACTACGGTGCTAAG
GCGGATAAGTCTACTGATCTGGGCGCGCCGTTGGCATCTGCCTTCGCTGA
CTGCAAGTCTGGCGGTCTCGTCTATGTCCCCTCTGGTGACTATGCTCTCT
CCACTTGGGCGAGATTGAGCGGTGGTGAGGCATGGGCTCTGCAGATCGAT
GGAATCATCTACCGTACTGGCACGGACGGCGGCAACATGATCTATATCGA
GCACTCTAGCGACTTCGAACTTTTCAGTAGCACCTCCGAAGGTGCCATGC
AGGGTCTGGGCTACGAGTTCCATGCCGATGATAACTGGAGCGGCCCTCGT
CTGCTGCGACTCTATGAAGTTACTGACTTCTCGGTCCACGATTTCATCCT
GGTTGACTCTCCCTCTTTCCACTTCTCTCTCGACACTTGCACCAATGGCG
AAATCTACAACATGGCAATCCGCGGCGGTAACCATGGTGGTCTGGATGGT
ATTGATGTCTGGAGTAACAACATCTGGGTCCACGATGTGAGTACCGAAGA
GCATAACGTTTCCATACAGGTTATTAATTAGTCCGATAGGTCGAGGTGAC
GAACAAGGACGAGTGTGTCACAGTCAAGGTAAGACCCTGATGAGTGCCCG
AGCAGGAAGCTTCAGGCTAACAATCAATAATAGAGCCCATCGAAGAACAT
CCTCATTGAGAGCATCTACTGCAACTGGAGTGGTGGCTGTGGTATGGGCT
CGTTTGGCTCTGATACCAATGTTAGCGACATCACTTACCGCAACATCTAC
ACCTGGAGCTCGAACAACATGATGTTGATCAAGAGCAACGGAGGTAGCGG
CTTCGTCGAGAATGTCCTCCTCGAGAACTTCATTGGTGAGTGATATCTTA
TGCAAAATTATTGGTCTTGACGGGACTAACCGAGGACTCTTTCTGTTGGT
AAACAGGACACGGCAACGCTTACTCTCTGGATATCGACAGCTACTGGGCC
AGTATGAGCGCGGTGGACGGCGATGGTGTCCAGCTGAGCAACATCACCGT
GAAGAACTGGAAGGGAACCGAAGCTTACGGTGCTGAGCGTGGTCCTGTCA
AGGTGGTCTGTGCTGATGGTGCCCCTTGCTACGACATTACCATTGAGGAC
TTCGCCATGTGGACCGAGGAGGGTGATAGTCAGTGGTACTCTTGTGAGAG
TGCTTATGGCAGCGGATACTGCCTTCAGGACAGCGATGACCACGTCTCTT
ACTCGGTCACCACTTCTACAGTCAGCTCCGCTCCCTCGGGCTACTCTGCG
ACCTCCATGGCCGCCGATCTGACCACTGACTTCGGCTCTACTGTCTCTAT
CCCCATCCCGACCATCCCTACCTCTTTCTACCCGGGTGCCACCCCCTACA
GTGCTCTGATGGCCAACAGCGCTTCTACTGCCGCTGCTTCTTCCATTGCC
AGCCATGCCACTGTCCATAGCAGCAGCGCTTCCGTTGCTGCTTCTGTGCC
CAGCGCTGTCGCCCCTAGCGAGAGCATCCCCGCCGCCACTTCCGCCGTGG
TATCCAGCGCTGCTGCCATTGCCCCCAGCCCCGCTGTGGGTGCCCAGGAG
GGGTCTACCACCTCCGCTCCCAGCTTTGCTGCCCCCAGTGGTGCTGGAAA
CTCTCCCCAGGGTCCCACCGGAGCTTCTGGATTCGGCGAAAAGGGCCAGC
AGGGTGAGCAGGGTGAACAGGGCGAACAGGGCGAGCAGGGTGTCTGCTAC
GTGTAA back to topCoding sequence (CDS) from alignment at An14:1024872..1026727- >CBS51388_008911-T1 ID=CBS51388_008911-T1|Name=CBS51388_008911-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6708bp|location=Sequence derived from alignment at An14:1024872..1026727- (Aspergillus niger CBS 513.88)
GACACGGCAACGCTTACTCTCTGGATATCGACAGCTACTGGGCCAGTATG
AGCGCGGTGGACGGCGATGGTGTCCAGCTGAGCAACATCACCGTGAAGAA
CTGGAAGGGAACCGAAGCTTACGGTGCTGAGCGTGGTCCTGTCAAGGTGG
TCTGTGCTGATGGTGCCCCTTGCTACGACATTACCATTGAGGACTTCGCC
ATGTGGACCGAGGAGGGTGATAGTCAGTGGTACTCTTGTGAGAGTGCTTA
TGGCAGCGGATACTGCCTTCAGGACAGCGATGACCACGTCTCTTACTCGG
TCACCACTTCTACAGTCAGCTCCGCTCCCTCGGGCTACTCTGCGACCTCC
ATGGCCGCCGATCTGACCACTGACTTCGGCTCTACTGTCTCTATCCCCAT
CCCGACCATCCCTACCTCTTTCTACCCGGGTGCCACCCCCTACAGTGCTC
TGATGGCCAACAGCGCTTCTACTGCCGCTGCTTCTTCCATTGCCAGCCAT
GCCACTGTCCATAGCAGCAGCGCTTCCGTTGCTGCTTCTGTGCCCAGCGC
TGTCGCCCCTAGCGAGAGCATCCCCGCCGCCACTTCCGCCGTGGTATCCA
GCGCTGCTGCCATTGCCCCCAGCCCCGCTGTGGGTGCCCAGGAGGGGTCT
ACCACCTCCGCTCCCAGCTTTGCTGCCCCCAGTGGTGCTGGAAACTCTCC
CCAGGGTCCCACCGGAGCTTCTGGATTCGGCGAAAAGGGCCAGCAGGGTG
AGCAGGGTGAACAGGGCGAACAGGGCGAGCAGGGTGTCTGCTACGTGTAA
AGCCCATCGAAGAACATCCTCATTGAGAGCATCTACTGCAACTGGAGTGG
TGGCTGTGGTATGGGCTCGTTTGGCTCTGATACCAATGTTAGCGACATCA
CTTACCGCAACATCTACACCTGGAGCTCGAACAACATGATGTTGATCAAG
AGCAACGGAGGTAGCGGCTTCGTCGAGAATGTCCTCCTCGAGAACTTCAT
TGGTCGAGGTGACGAACAAGGACGAGTGTGTCACAGTCAAGATGCTTCTC
GACAAGCTCTCTGTTCTCTCTTTCCTGGGCCTGGCGCCCATCTTTGCTGC
TGCGCAGCTCTCCGGTTCCGTGGGACCGCTGACATCCGCGTCCACCAAGG
CAGCTACCAAGACTTGCAACGTTTTGGACTACGGTGCTAAGGCGGATAAG
TCTACTGATCTGGGCGCGCCGTTGGCATCTGCCTTCGCTGACTGCAAGTC
TGGCGGTCTCGTCTATGTCCCCTCTGGTGACTATGCTCTCTCCACTTGGG
CGAGATTGAGCGGTGGTGAGGCATGGGCTCTGCAGATCGATGGAATCATC
TACCGTACTGGCACGGACGGCGGCAACATGATCTATATCGAGCACTCTAG
CGACTTCGAACTTTTCAGTAGCACCTCCGAAGGTGCCATGCAGGGTCTGG
GCTACGAGTTCCATGCCGATGATAACTGGAGCGGCCCTCGTCTGCTGCGA
CTCTATGAAGTTACTGACTTCTCGGTCCACGATTTCATCCTGGTTGACTC
TCCCTCTTTCCACTTCTCTCTCGACACTTGCACCAATGGCGAAATCTACA
ACATGGCAATCCGCGGCGGTAACCATGGTGGTCTGGATGGTATTGATGTC
TGGAGTAACAACATCTGGGTCCACGATGACACGGCAACGCTTACTCTCTG
GATATCGACAGCTACTGGGCCAGTATGAGCGCGGTGGACGGCGATGGTGT
CCAGCTGAGCAACATCACCGTGAAGAACTGGAAGGGAACCGAAGCTTACG
GTGCTGAGCGTGGTCCTGTCAAGGTGGTCTGTGCTGATGGTGCCCCTTGC
TACGACATTACCATTGAGGACTTCGCCATGTGGACCGAGGAGGGTGATAG
TCAGTGGTACTCTTGTGAGAGTGCTTATGGCAGCGGATACTGCCTTCAGG
ACAGCGATGACCACGTCTCTTACTCGGTCACCACTTCTACAGTCAGCTCC
GCTCCCTCGGGCTACTCTGCGACCTCCATGGCCGCCGATCTGACCACTGA
CTTCGGCTCTACTGTCTCTATCCCCATCCCGACCATCCCTACCTCTTTCT
ACCCGGGTGCCACCCCCTACAGTGCTCTGATGGCCAACAGCGCTTCTACT
GCCGCTGCTTCTTCCATTGCCAGCCATGCCACTGTCCATAGCAGCAGCGC
TTCCGTTGCTGCTTCTGTGCCCAGCGCTGTCGCCCCTAGCGAGAGCATCC
CCGCCGCCACTTCCGCCGTGGTATCCAGCGCTGCTGCCATTGCCCCCAGC
CCCGCTGTGGGTGCCCAGGAGGGGTCTACCACCTCCGCTCCCAGCTTTGC
TGCCCCCAGTGGTGCTGGAAACTCTCCCCAGGGTCCCACCGGAGCTTCTG
GATTCGGCGAAAAGGGCCAGCAGGGTGAGCAGGGTGAACAGGGCGAACAG
GGCGAGCAGGGTGTCTGCTACGTGTAAAGCCCATCGAAGAACATCCTCAT
TGAGAGCATCTACTGCAACTGGAGTGGTGGCTGTGGTATGGGCTCGTTTG
GCTCTGATACCAATGTTAGCGACATCACTTACCGCAACATCTACACCTGG
AGCTCGAACAACATGATGTTGATCAAGAGCAACGGAGGTAGCGGCTTCGT
CGAGAATGTCCTCCTCGAGAACTTCATTGGTCGAGGTGACGAACAAGGAC
GAGTGTGTCACAGTCAAGATGCTTCTCGACAAGCTCTCTGTTCTCTCTTT
CCTGGGCCTGGCGCCCATCTTTGCTGCTGCGCAGCTCTCCGGTTCCGTGG
GACCGCTGACATCCGCGTCCACCAAGGCAGCTACCAAGACTTGCAACGTT
TTGGACTACGGTGCTAAGGCGGATAAGTCTACTGATCTGGGCGCGCCGTT
GGCATCTGCCTTCGCTGACTGCAAGTCTGGCGGTCTCGTCTATGTCCCCT
CTGGTGACTATGCTCTCTCCACTTGGGCGAGATTGAGCGGTGGTGAGGCA
TGGGCTCTGCAGATCGATGGAATCATCTACCGTACTGGCACGGACGGCGG
CAACATGATCTATATCGAGCACTCTAGCGACTTCGAACTTTTCAGTAGCA
CCTCCGAAGGTGCCATGCAGGGTCTGGGCTACGAGTTCCATGCCGATGAT
AACTGGAGCGGCCCTCGTCTGCTGCGACTCTATGAAGTTACTGACTTCTC
GGTCCACGATTTCATCCTGGTTGACTCTCCCTCTTTCCACTTCTCTCTCG
ACACTTGCACCAATGGCGAAATCTACAACATGGCAATCCGCGGCGGTAAC
CATGGTGGTCTGGATGGTATTGATGTCTGGAGTAACAACATCTGGGTCCA
CGATGACACGGCAACGCTTACTCTCTGGATATCGACAGCTACTGGGCCAG
TATGAGCGCGGTGGACGGCGATGGTGTCCAGCTGAGCAACATCACCGTGA
AGAACTGGAAGGGAACCGAAGCTTACGGTGCTGAGCGTGGTCCTGTCAAG
GTGGTCTGTGCTGATGGTGCCCCTTGCTACGACATTACCATTGAGGACTT
CGCCATGTGGACCGAGGAGGGTGATAGTCAGTGGTACTCTTGTGAGAGTG
CTTATGGCAGCGGATACTGCCTTCAGGACAGCGATGACCACGTCTCTTAC
TCGGTCACCACTTCTACAGTCAGCTCCGCTCCCTCGGGCTACTCTGCGAC
CTCCATGGCCGCCGATCTGACCACTGACTTCGGCTCTACTGTCTCTATCC
CCATCCCGACCATCCCTACCTCTTTCTACCCGGGTGCCACCCCCTACAGT
GCTCTGATGGCCAACAGCGCTTCTACTGCCGCTGCTTCTTCCATTGCCAG
CCATGCCACTGTCCATAGCAGCAGCGCTTCCGTTGCTGCTTCTGTGCCCA
GCGCTGTCGCCCCTAGCGAGAGCATCCCCGCCGCCACTTCCGCCGTGGTA
TCCAGCGCTGCTGCCATTGCCCCCAGCCCCGCTGTGGGTGCCCAGGAGGG
GTCTACCACCTCCGCTCCCAGCTTTGCTGCCCCCAGTGGTGCTGGAAACT
CTCCCCAGGGTCCCACCGGAGCTTCTGGATTCGGCGAAAAGGGCCAGCAG
GGTGAGCAGGGTGAACAGGGCGAACAGGGCGAGCAGGGTGTCTGCTACGT
GTAAAGCCCATCGAAGAACATCCTCATTGAGAGCATCTACTGCAACTGGA
GTGGTGGCTGTGGTATGGGCTCGTTTGGCTCTGATACCAATGTTAGCGAC
ATCACTTACCGCAACATCTACACCTGGAGCTCGAACAACATGATGTTGAT
CAAGAGCAACGGAGGTAGCGGCTTCGTCGAGAATGTCCTCCTCGAGAACT
TCATTGGTCGAGGTGACGAACAAGGACGAGTGTGTCACAGTCAAGATGCT
TCTCGACAAGCTCTCTGTTCTCTCTTTCCTGGGCCTGGCGCCCATCTTTG
CTGCTGCGCAGCTCTCCGGTTCCGTGGGACCGCTGACATCCGCGTCCACC
AAGGCAGCTACCAAGACTTGCAACGTTTTGGACTACGGTGCTAAGGCGGA
TAAGTCTACTGATCTGGGCGCGCCGTTGGCATCTGCCTTCGCTGACTGCA
AGTCTGGCGGTCTCGTCTATGTCCCCTCTGGTGACTATGCTCTCTCCACT
TGGGCGAGATTGAGCGGTGGTGAGGCATGGGCTCTGCAGATCGATGGAAT
CATCTACCGTACTGGCACGGACGGCGGCAACATGATCTATATCGAGCACT
CTAGCGACTTCGAACTTTTCAGTAGCACCTCCGAAGGTGCCATGCAGGGT
CTGGGCTACGAGTTCCATGCCGATGATAACTGGAGCGGCCCTCGTCTGCT
GCGACTCTATGAAGTTACTGACTTCTCGGTCCACGATTTCATCCTGGTTG
ACTCTCCCTCTTTCCACTTCTCTCTCGACACTTGCACCAATGGCGAAATC
TACAACATGGCAATCCGCGGCGGTAACCATGGTGGTCTGGATGGTATTGA
TGTCTGGAGTAACAACATCTGGGTCCACGATGACACGGCAACGCTTACTC
TCTGGATATCGACAGCTACTGGGCCAGTATGAGCGCGGTGGACGGCGATG
GTGTCCAGCTGAGCAACATCACCGTGAAGAACTGGAAGGGAACCGAAGCT
TACGGTGCTGAGCGTGGTCCTGTCAAGGTGGTCTGTGCTGATGGTGCCCC
TTGCTACGACATTACCATTGAGGACTTCGCCATGTGGACCGAGGAGGGTG
ATAGTCAGTGGTACTCTTGTGAGAGTGCTTATGGCAGCGGATACTGCCTT
CAGGACAGCGATGACCACGTCTCTTACTCGGTCACCACTTCTACAGTCAG
CTCCGCTCCCTCGGGCTACTCTGCGACCTCCATGGCCGCCGATCTGACCA
CTGACTTCGGCTCTACTGTCTCTATCCCCATCCCGACCATCCCTACCTCT
TTCTACCCGGGTGCCACCCCCTACAGTGCTCTGATGGCCAACAGCGCTTC
TACTGCCGCTGCTTCTTCCATTGCCAGCCATGCCACTGTCCATAGCAGCA
GCGCTTCCGTTGCTGCTTCTGTGCCCAGCGCTGTCGCCCCTAGCGAGAGC
ATCCCCGCCGCCACTTCCGCCGTGGTATCCAGCGCTGCTGCCATTGCCCC
CAGCCCCGCTGTGGGTGCCCAGGAGGGGTCTACCACCTCCGCTCCCAGCT
TTGCTGCCCCCAGTGGTGCTGGAAACTCTCCCCAGGGTCCCACCGGAGCT
TCTGGATTCGGCGAAAAGGGCCAGCAGGGTGAGCAGGGTGAACAGGGCGA
ACAGGGCGAGCAGGGTGTCTGCTACGTGTAAAGCCCATCGAAGAACATCC
TCATTGAGAGCATCTACTGCAACTGGAGTGGTGGCTGTGGTATGGGCTCG
TTTGGCTCTGATACCAATGTTAGCGACATCACTTACCGCAACATCTACAC
CTGGAGCTCGAACAACATGATGTTGATCAAGAGCAACGGAGGTAGCGGCT
TCGTCGAGAATGTCCTCCTCGAGAACTTCATTGGTCGAGGTGACGAACAA
GGACGAGTGTGTCACAGTCAAGATGCTTCTCGACAAGCTCTCTGTTCTCT
CTTTCCTGGGCCTGGCGCCCATCTTTGCTGCTGCGCAGCTCTCCGGTTCC
GTGGGACCGCTGACATCCGCGTCCACCAAGGCAGCTACCAAGACTTGCAA
CGTTTTGGACTACGGTGCTAAGGCGGATAAGTCTACTGATCTGGGCGCGC
CGTTGGCATCTGCCTTCGCTGACTGCAAGTCTGGCGGTCTCGTCTATGTC
CCCTCTGGTGACTATGCTCTCTCCACTTGGGCGAGATTGAGCGGTGGTGA
GGCATGGGCTCTGCAGATCGATGGAATCATCTACCGTACTGGCACGGACG
GCGGCAACATGATCTATATCGAGCACTCTAGCGACTTCGAACTTTTCAGT
AGCACCTCCGAAGGTGCCATGCAGGGTCTGGGCTACGAGTTCCATGCCGA
TGATAACTGGAGCGGCCCTCGTCTGCTGCGACTCTATGAAGTTACTGACT
TCTCGGTCCACGATTTCATCCTGGTTGACTCTCCCTCTTTCCACTTCTCT
CTCGACACTTGCACCAATGGCGAAATCTACAACATGGCAATCCGCGGCGG
TAACCATGGTGGTCTGGATGGTATTGATGTCTGGAGTAACAACATCTGGG
TCCACGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004650 | polygalacturonase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-21) |
| Note | CAZy:GH28 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR000743 |
| DBxref | PFAM:PF00295 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An14 | supercontig | An14:1024872..1026727 - |
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