You are here

CBS51388_008929-T1, CBS51388_008929-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008929-T1
Unique NameCBS51388_008929-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:1079869..1080839+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008929-T1 ID=CBS51388_008929-T1|Name=CBS51388_008929-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=971bp|location=Sequence derived from alignment at An14:1079869..1080839+ (Aspergillus niger CBS 513.88)
ATGGCTACCACTCTACTCATCACTGGAGCCACCGGAAACCAAGGGGGTGC GGTCATTAATGCTCTGCTGGCGCAGGACGCAGACGTTGAGATCCTCGCCG TGACCCGCAACCCGCAGTCAGGAACATCGCAGAAGCTTGCCGGAAAGTCT CCCAAAATTAAGCTATTTCAGGGCGACCTTGATCATCCATCGGAGATCTT CGAAAATGCGAAGAAACTCGCCACTCGGCCCATCTCTGGGGTCTTTAGCG TTCAGGTAGTCTCCAGCCATATGCTTTCCACCCACCCGCGGTAATAGTTA ACGCAAGATAGAACCCTATGGCGAAAGGTCAAAATGTAGACAAAGAAGAA GTCCAAGGTAAAGCCTTGGTTGATGAATCCATCAAGCAAGACATCAGACA CTTTGTCTACAGCTCCGTCGATCGCGGTGGTGATGCCTCCACGGACAATC CAACCAATATCCCTCATTTCATCAGCAAACATCGCATCGAACACCATCTG TTCGAGCAGACCAAGGATGGAGCCATGACATGGACTGTCCTCCGTCCGGT GTTCTTTTTCGAGAATCTTGTCCCGAGCTTCATAGGCAAGCTGAGCGCCA CAGCCTGGGATGCCTACCTGCAGGGCAAACCGCTGCAGTGCGTTGCGGTC AGCGATATTGGGGTGTTTGCAGCCAAGGCTCTTCTCGAGCCACAAAACTA CAAGAATCAGTGTATTTCTCTCGCCGGAGATGACTTGACATTCGAACATA TGCAGAAGTTGTTCAAGGCGAAAACGGGGGAGACGATGCCAACCACATAC CGGGTGGTCTGTTATGTACTGATGTGGATGGTCACTGATTTGCGGCTTAT GTTCAACTGGTTCTACAGTCATGGCTACGGTGCAGATATTCAGGGTCTAA GGAAGATACATCCTGGCCTGAAGAACTTTGAAGCGTGGCTGGAAGAGGAC AGCGAATGGGTGAAGCACTGA
back to top

Coding sequence (CDS) from alignment at An14:1079869..1080839+

>CBS51388_008929-T1 ID=CBS51388_008929-T1|Name=CBS51388_008929-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1830bp|location=Sequence derived from alignment at An14:1079869..1080839+ (Aspergillus niger CBS 513.88)
ATGGCTACCACTCTACTCATCACTGGAGCCACCGGAAACCAAGGGGGTGC
GGTCATTAATGCTCTGCTGGCGCAGGACGCAGACGTTGAGATCCTCGCCG
TGACCCGCAACCCGCAGTCAGGAACATCGCAGAAGCTTGCCGGAAAGTCT
CCCAAAATTAAGCTATTTCAGGGCGACCTTGATCATCCATCGGAGATCTT
CGAAAATGCGAAGAAACTCGCCACTCGGCCCATCTCTGGGGTCTTTAGCG
TTCAGAACCCTATGGCGAAAGGTCAAAATGTAGACAAAGAAGAAGTCCAA
GGTAAAGCCTTGGTTGATGAATCCATCAAGCAAGACATCAGACACTTTGT
CTACAGCTCCGTCGATCGCGGTGGTGATGCCTCCACGGACAATCCAACCA
ATATCCCTCATTTCATCAGCAAACATCGCATCGAACACCATCTGTTCGAG
CAGACCAAGGATGGAGCCATGACATGGACTGTCCTCCGTCCGGTGTTCTT
TTTCGAGAATCTTGTCCCGAGCTTCATAGGCAAGCTGAGCGCCACAGCCT
GGGATGCCTACCTGCAGGGCAAACCGCTGCAGTGCGTTGCGGTCAGCGAT
ATTGGGGTGTTTGCAGCCAAGGCTCTTCTCGAGCCACAAAACTACAAGAA
TCAGTGTATTTCTCTCGCCGGAGATGACTTGACATTCGAACATATGCAGA
AGTTGTTCAAGGCGAAAACGGGGGAGACGATGCCAACCACATACCGGGTG
GTCTGTTATGTACTGATGTGGATGGTCACTGATTTGCGGCTTATGTTCAA
CTGGTTCTACAGTCATGGCTACGGTGCAGATATTCAGGGTCTAAGGAAGA
TACATCCTGGCCTGAAGAACTTTGAAGCGTGGCTGGAAGAGGACAGCGAA
TGGGTGAAGCACTGAATGGCTACCACTCTACTCATCACTGGAGCCACCGG
AAACCAAGGGGGTGCGGTCATTAATGCTCTGCTGGCGCAGGACGCAGACG
TTGAGATCCTCGCCGTGACCCGCAACCCGCAGTCAGGAACATCGCAGAAG
CTTGCCGGAAAGTCTCCCAAAATTAAGCTATTTCAGGGCGACCTTGATCA
TCCATCGGAGATCTTCGAAAATGCGAAGAAACTCGCCACTCGGCCCATCT
CTGGGGTCTTTAGCGTTCAGAACCCTATGGCGAAAGGTCAAAATGTAGAC
AAAGAAGAAGTCCAAGGTAAAGCCTTGGTTGATGAATCCATCAAGCAAGA
CATCAGACACTTTGTCTACAGCTCCGTCGATCGCGGTGGTGATGCCTCCA
CGGACAATCCAACCAATATCCCTCATTTCATCAGCAAACATCGCATCGAA
CACCATCTGTTCGAGCAGACCAAGGATGGAGCCATGACATGGACTGTCCT
CCGTCCGGTGTTCTTTTTCGAGAATCTTGTCCCGAGCTTCATAGGCAAGC
TGAGCGCCACAGCCTGGGATGCCTACCTGCAGGGCAAACCGCTGCAGTGC
GTTGCGGTCAGCGATATTGGGGTGTTTGCAGCCAAGGCTCTTCTCGAGCC
ACAAAACTACAAGAATCAGTGTATTTCTCTCGCCGGAGATGACTTGACAT
TCGAACATATGCAGAAGTTGTTCAAGGCGAAAACGGGGGAGACGATGCCA
ACCACATACCGGGTGGTCTGTTATGTACTGATGTGGATGGTCACTGATTT
GCGGCTTATGTTCAACTGGTTCTACAGTCATGGCTACGGTGCAGATATTC
AGGGTCTAAGGAAGATACATCCTGGCCTGAAGAACTTTGAAGCGTGGCTG
GAAGAGGACAGCGAATGGGTGAAGCACTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008929CBS51388_008929Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008929-T1.exon1CBS51388_008929-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_008929-T1.exon2CBS51388_008929-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008929-T1.cdsCBS51388_008929-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008929-T1CBS51388_008929-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008030
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
DBxrefPFAM:PF01370
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:1079869..1080839 +