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Sequences
The following sequences are available for this feature:
mRNA from alignment at An14:1189993..1190748- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008966-T1 ID=CBS51388_008966-T1|Name=CBS51388_008966-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=756bp|location=Sequence derived from alignment at An14:1189993..1190748- (Aspergillus niger CBS 513.88)
ATGGCCACTGCACTACCCACTTTGGCCATCCCAGGCCAGCGCCTAGGCTC
AATTGCCTCGTATGCCGCCGGTCCTGGTACACATGTGCAGAACGCAACCA
TCTATGCCTCGATCGCAGGCCCCGTGGTCGTCGATCAAGCGCAACCCAGC
TCCAAAGCAAAGCTCATCTTGAGCGTCTCCCGAACAGGCCCCAAGAAGGC
TGCTGCACCGGCACCCAGCACCAAGGCGTCCGCCAACCCCGCCAACACTG
GAAAGCCGAAGCTGAGATACAACACCCTCCCTGCCGTCGACTCGGTCGTG
TTGGCGCGCGTAACTCGCGTTCAGAAGCGACAAGCCACCGTATCTATTCT
AGTCGTGCTCGACGAATCCGCTAGCTCCCAGCCGCTCAACCCCTCACAGA
CTGCGTCGGACAATGACAACATCGAAGCTATCCTTTCGTCCGCGGCTAAT
CCGGAGAACCACAGCAACTCGGATGAACTTCGCTTCCAGGCTCTGATCCG
CAAGGAGGACGTGCGTGCTGTTGAGAAAGACCGCGTTGTCATGGATGAGA
TGTTCCGTGTTGGGGATATCGTTCGCGGAACGGTTATCTCCCTTGGTGAT
CAAAGCTTCTACTATCTTACCACGGCTAGGAATGATCTGGGTGTCGTTAT
GGCCCGCAGTGAGTCGGGTAATATGATGTTCCCGGTTAGCTGGAAGGAAA
TGAGAGATCCTGTTACTGGGGTTGCGGAGTTGAGGAAGGTAGCTAGGCCG
TTTTGA back to topCoding sequence (CDS) from alignment at An14:1189993..1190748- >CBS51388_008966-T1 ID=CBS51388_008966-T1|Name=CBS51388_008966-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=756bp|location=Sequence derived from alignment at An14:1189993..1190748- (Aspergillus niger CBS 513.88)
ATGGCCACTGCACTACCCACTTTGGCCATCCCAGGCCAGCGCCTAGGCTC
AATTGCCTCGTATGCCGCCGGTCCTGGTACACATGTGCAGAACGCAACCA
TCTATGCCTCGATCGCAGGCCCCGTGGTCGTCGATCAAGCGCAACCCAGC
TCCAAAGCAAAGCTCATCTTGAGCGTCTCCCGAACAGGCCCCAAGAAGGC
TGCTGCACCGGCACCCAGCACCAAGGCGTCCGCCAACCCCGCCAACACTG
GAAAGCCGAAGCTGAGATACAACACCCTCCCTGCCGTCGACTCGGTCGTG
TTGGCGCGCGTAACTCGCGTTCAGAAGCGACAAGCCACCGTATCTATTCT
AGTCGTGCTCGACGAATCCGCTAGCTCCCAGCCGCTCAACCCCTCACAGA
CTGCGTCGGACAATGACAACATCGAAGCTATCCTTTCGTCCGCGGCTAAT
CCGGAGAACCACAGCAACTCGGATGAACTTCGCTTCCAGGCTCTGATCCG
CAAGGAGGACGTGCGTGCTGTTGAGAAAGACCGCGTTGTCATGGATGAGA
TGTTCCGTGTTGGGGATATCGTTCGCGGAACGGTTATCTCCCTTGGTGAT
CAAAGCTTCTACTATCTTACCACGGCTAGGAATGATCTGGGTGTCGTTAT
GGCCCGCAGTGAGTCGGGTAATATGATGTTCCCGGTTAGCTGGAAGGAAA
TGAGAGATCCTGTTACTGGGGTTGCGGAGTTGAGGAAGGTAGCTAGGCCG
TTTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000178 | exosome (RNase complex) |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092653O3 |
| DBxref | InterPro:IPR012340 |
| DBxref | InterPro:IPR019495 |
| DBxref | InterPro:IPR025721 |
| DBxref | PFAM:PF10447 |
| DBxref | PFAM:PF14382 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An14 | supercontig | An14:1189993..1190748 - |
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