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Sequences
The following sequences are available for this feature:
mRNA from alignment at An14:1264342..1265078- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008991-T1 ID=CBS51388_008991-T1|Name=CBS51388_008991-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=737bp|location=Sequence derived from alignment at An14:1264342..1265078- (Aspergillus niger CBS 513.88) ATGGGTGTGCAAAAGAAGACTCGCAAGTTCGCGCAGGTATGTCTCTGTGG
CTTCGCAGCAGATACGGAACGGAAACTGATCCTACTGAATCTATAGATGA
AGCGCGCCATCAAAGCCCGTGATGAGCGACTGAAGAAGCCGGAAGCGAAA
AAGGAGACGCCCAAGGAGGATCAGCTGACTCGACAAGTCACCCAAGCTCC
TTCGAACATGTTCTTTGCCGCGAACACTGCCCTTGGCCCTCCCTACCACG
TGCTGGTCGATACCAACTTTGTTTCCCACGCCATTCGAGCCAAGCAGGAC
CTACTTACTTCGATGATGGACTTGTGAGTTGGAACACTATTTGGACTTTG
GATATATGCTAAGACTGGCTGCAGGCTGTACGCGAAGTGTATTCCGACCT
TCTCAGACTGCACTATCGCGGAATTGGAAAAGCTGGGTGACAAGTACCGC
CTCGCACTTCGGGTTGCCAAAGACCCTCGGTGGTCTAGGGTTAAGTGCTC
TCACAAGGGTACCTATGCAGATGACTGTATCGTGGATCGGGTGAGTGGTT
ACTCAAATTTTTCTTGGGTAGCACAGCGCGCTAACGACTCTTGTAGGTGA
CCAAGCATAGAATTTACATTGTGGCGACCAATGATCAAGATCTGTGTCGC
CGCCTGCGCAAGATTCCTGGTGTTCCGATCATGAAGGTTGCTAGGGGCAA
ATTCACCATCGAGAAGTTGCCCGATGCTTTGGATTAA back to topCoding sequence (CDS) from alignment at An14:1264342..1265078- >CBS51388_008991-T1 ID=CBS51388_008991-T1|Name=CBS51388_008991-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2280bp|location=Sequence derived from alignment at An14:1264342..1265078- (Aspergillus niger CBS 513.88) GTGACCAAGCATAGAATTTACATTGTGGCGACCAATGATCAAGATCTGTG TCGCCGCCTGCGCAAGATTCCTGGTGTTCCGATCATGAAGGTTGCTAGGG GCAAATTCACCATCGAGAAGTTGCCCGATGCTTTGGATTAAGCTGTACGC GAAGTGTATTCCGACCTTCTCAGACTGCACTATCGCGGAATTGGAAAAGC TGGGTGACAAGTACCGCCTCGCACTTCGGGTTGCCAAAGACCCTCGGTGG TCTAGGGTTAAGTGCTCTCACAAGGGTACCTATGCAGATGACTGTATCGT GGATCGGATGAAGCGCGCCATCAAAGCCCGTGATGAGCGACTGAAGAAGC CGGAAGCGAAAAAGGAGACGCCCAAGGAGGATCAGCTGACTCGACAAGTC ACCCAAGCTCCTTCGAACATGTTCTTTGCCGCGAACACTGCCCTTGGCCC TCCCTACCACGTGCTGGTCGATACCAACTTTGTTTCCCACGCCATTCGAG CCAAGCAGGACCTACTTACTTCGATGATGGACTTATGGGTGTGCAAAAGA AGACTCGCAAGTTCGCGCAGGTGACCAAGCATAGAATTTACATTGTGGCG ACCAATGATCAAGATCTGTGTCGCCGCCTGCGCAAGATTCCTGGTGTTCC GATCATGAAGGTTGCTAGGGGCAAATTCACCATCGAGAAGTTGCCCGATG CTTTGGATTAAGCTGTACGCGAAGTGTATTCCGACCTTCTCAGACTGCAC TATCGCGGAATTGGAAAAGCTGGGTGACAAGTACCGCCTCGCACTTCGGG TTGCCAAAGACCCTCGGTGGTCTAGGGTTAAGTGCTCTCACAAGGGTACC TATGCAGATGACTGTATCGTGGATCGGATGAAGCGCGCCATCAAAGCCCG TGATGAGCGACTGAAGAAGCCGGAAGCGAAAAAGGAGACGCCCAAGGAGG ATCAGCTGACTCGACAAGTCACCCAAGCTCCTTCGAACATGTTCTTTGCC GCGAACACTGCCCTTGGCCCTCCCTACCACGTGCTGGTCGATACCAACTT TGTTTCCCACGCCATTCGAGCCAAGCAGGACCTACTTACTTCGATGATGG ACTTATGGGTGTGCAAAAGAAGACTCGCAAGTTCGCGCAGGTGACCAAGC ATAGAATTTACATTGTGGCGACCAATGATCAAGATCTGTGTCGCCGCCTG CGCAAGATTCCTGGTGTTCCGATCATGAAGGTTGCTAGGGGCAAATTCAC CATCGAGAAGTTGCCCGATGCTTTGGATTAAGCTGTACGCGAAGTGTATT CCGACCTTCTCAGACTGCACTATCGCGGAATTGGAAAAGCTGGGTGACAA GTACCGCCTCGCACTTCGGGTTGCCAAAGACCCTCGGTGGTCTAGGGTTA AGTGCTCTCACAAGGGTACCTATGCAGATGACTGTATCGTGGATCGGATG AAGCGCGCCATCAAAGCCCGTGATGAGCGACTGAAGAAGCCGGAAGCGAA AAAGGAGACGCCCAAGGAGGATCAGCTGACTCGACAAGTCACCCAAGCTC CTTCGAACATGTTCTTTGCCGCGAACACTGCCCTTGGCCCTCCCTACCAC GTGCTGGTCGATACCAACTTTGTTTCCCACGCCATTCGAGCCAAGCAGGA CCTACTTACTTCGATGATGGACTTATGGGTGTGCAAAAGAAGACTCGCAA GTTCGCGCAGGTGACCAAGCATAGAATTTACATTGTGGCGACCAATGATC AAGATCTGTGTCGCCGCCTGCGCAAGATTCCTGGTGTTCCGATCATGAAG GTTGCTAGGGGCAAATTCACCATCGAGAAGTTGCCCGATGCTTTGGATTA AGCTGTACGCGAAGTGTATTCCGACCTTCTCAGACTGCACTATCGCGGAA TTGGAAAAGCTGGGTGACAAGTACCGCCTCGCACTTCGGGTTGCCAAAGA CCCTCGGTGGTCTAGGGTTAAGTGCTCTCACAAGGGTACCTATGCAGATG ACTGTATCGTGGATCGGATGAAGCGCGCCATCAAAGCCCGTGATGAGCGA CTGAAGAAGCCGGAAGCGAAAAAGGAGACGCCCAAGGAGGATCAGCTGAC TCGACAAGTCACCCAAGCTCCTTCGAACATGTTCTTTGCCGCGAACACTG CCCTTGGCCCTCCCTACCACGTGCTGGTCGATACCAACTTTGTTTCCCAC GCCATTCGAGCCAAGCAGGACCTACTTACTTCGATGATGGACTTATGGGT GTGCAAAAGAAGACTCGCAAGTTCGCGCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0032040 | small-subunit processome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | BUSCO:EOG09264SET |
DBxref | InterPro:IPR029060 |
DBxref | InterPro:IPR006984 |
DBxref | InterPro:IPR002716 |
DBxref | PFAM:PF18477 |
DBxref | PFAM:PF04900 |
Product | rRNA-processing protein fcf1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
An14 | supercontig | An14:1264342..1265078 - |
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