You are here

CBS51388_008995-T1, CBS51388_008995-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008995-T1
Unique NameCBS51388_008995-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:1277161..1278231+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008995-T1 ID=CBS51388_008995-T1|Name=CBS51388_008995-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1071bp|location=Sequence derived from alignment at An14:1277161..1278231+ (Aspergillus niger CBS 513.88)
ATGGATACCGACAAAGCAGCAGAAACAACGCGTCTTCACGAGGAAAACGA AGATCCAGCTGTCAAAGACGTCATCCGCGTCGCCTCATATCATCGACTCG ACTACGATCTAGCAGTCATCAGAACTTTCCCTAGACCCCACCACCTCATA CGTGACTTGCTGACCCCCAAAACCCTTATCATCGACCTGAATTCAAGACT GGGTGTCCTGGATGTCTTCCCACTAGAATTCATCCACGAAATATGTCTCA TGCTTGATGTCCAATCCTTGTTCCGCTTCCACCGAGTCAACCGTCGTGCT CGACAAATAGCTAGCGCCAGTGGATACTACAAAGCAGTAGTCAAACATGC CATCGGGGCTCTGTTCGTTATCCTAAGAACAGGCATGGCATCTTGGTACA AATTATCGGACCTATATGACGTCCTCTGCACAAAGAACTGTGCAATCTGC AACGACTTTGGCGGCTTTATCTTCCTTCCATCGTTCATGAGATGTTGTTT CTTCTGCATTGAGGACGACGAACTTCCTCCCGTTCTGCCTGCTTCTCAAG TCAGACCATACCTGAACCGGCGTTCAGCCCCTCCTCTCTCCAGTCGGATC CCTATGATAAAGACGCTGCCTGGAATATACTCGTTGGATGAATCAAAGCG AACCAGAAGATTCGAACTTGTACTGGAACAATCAGCCATCTCGCTCTTCT CGTCTGACCGGGTTCCAACTTTCCCGAAGAAGTACTCTAGGGACACAGAG CTACAGCGTTACATGGTCAGTACGGCCCTACCTTACCTCGACAATAAGAA CGATGTCATCGAGAAGGGTGTCTCCTGCAGTGGCTGCCAGATTTCTCTGG AGAAGGCCTTGCAATCGTCAGGGGCCGAATATGATGTCTGGGATGACCGA GATAAAATTTATTCGCATGATCAATTCATGGAACATTTTGAGACTTGTCC AGAGGCTCGCAAGCTTTGGGAACTAAGCGAAGGGGGCACAATCGAGCCTG ATATCCCGGCGTTTGTTAAGAATGGAGGCTGCGCTAAGAAGAGGGAGCTA AAAAATGTCTTTTATCATTGA
back to top

Coding sequence (CDS) from alignment at An14:1277161..1278231+

>CBS51388_008995-T1 ID=CBS51388_008995-T1|Name=CBS51388_008995-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1071bp|location=Sequence derived from alignment at An14:1277161..1278231+ (Aspergillus niger CBS 513.88)
ATGGATACCGACAAAGCAGCAGAAACAACGCGTCTTCACGAGGAAAACGA
AGATCCAGCTGTCAAAGACGTCATCCGCGTCGCCTCATATCATCGACTCG
ACTACGATCTAGCAGTCATCAGAACTTTCCCTAGACCCCACCACCTCATA
CGTGACTTGCTGACCCCCAAAACCCTTATCATCGACCTGAATTCAAGACT
GGGTGTCCTGGATGTCTTCCCACTAGAATTCATCCACGAAATATGTCTCA
TGCTTGATGTCCAATCCTTGTTCCGCTTCCACCGAGTCAACCGTCGTGCT
CGACAAATAGCTAGCGCCAGTGGATACTACAAAGCAGTAGTCAAACATGC
CATCGGGGCTCTGTTCGTTATCCTAAGAACAGGCATGGCATCTTGGTACA
AATTATCGGACCTATATGACGTCCTCTGCACAAAGAACTGTGCAATCTGC
AACGACTTTGGCGGCTTTATCTTCCTTCCATCGTTCATGAGATGTTGTTT
CTTCTGCATTGAGGACGACGAACTTCCTCCCGTTCTGCCTGCTTCTCAAG
TCAGACCATACCTGAACCGGCGTTCAGCCCCTCCTCTCTCCAGTCGGATC
CCTATGATAAAGACGCTGCCTGGAATATACTCGTTGGATGAATCAAAGCG
AACCAGAAGATTCGAACTTGTACTGGAACAATCAGCCATCTCGCTCTTCT
CGTCTGACCGGGTTCCAACTTTCCCGAAGAAGTACTCTAGGGACACAGAG
CTACAGCGTTACATGGTCAGTACGGCCCTACCTTACCTCGACAATAAGAA
CGATGTCATCGAGAAGGGTGTCTCCTGCAGTGGCTGCCAGATTTCTCTGG
AGAAGGCCTTGCAATCGTCAGGGGCCGAATATGATGTCTGGGATGACCGA
GATAAAATTTATTCGCATGATCAATTCATGGAACATTTTGAGACTTGTCC
AGAGGCTCGCAAGCTTTGGGAACTAAGCGAAGGGGGCACAATCGAGCCTG
ATATCCCGGCGTTTGTTAAGAATGGAGGCTGCGCTAAGAAGAGGGAGCTA
AAAAATGTCTTTTATCATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008995CBS51388_008995Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008995-T1.exon1CBS51388_008995-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008995-T1.cdsCBS51388_008995-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008995-T1CBS51388_008995-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR001810
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:1277161..1278231 +