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CBS51388_009002-T1, CBS51388_009002-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009002-T1
Unique NameCBS51388_009002-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:1297754..1298727+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009002-T1 ID=CBS51388_009002-T1|Name=CBS51388_009002-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=974bp|location=Sequence derived from alignment at An14:1297754..1298727+ (Aspergillus niger CBS 513.88)
ATGTCAGGTACAATGTACGACGAGCACGTTTATGCACCCTCACGGCGCCA TTCAGTTGCTACTCCTCCCCCATCCATGACTCCACGACATAGTCGGACCC GCAGTCAAAGTGTCAGAGTTAGCAACGGCACCGTGAGCACAAATACAAGC GTTTCGAGTGGGAGGATGTCGGAAGCTACAAACATTACACATCCACCTGC GTATTCCAAGAAGTTTGTTGTGGTTGGTGATGGTGGATGTGGAAAGACGT GCCTTTTGATCAGTTATTCCCAAGGTTATTTCCCAGAGGTAGGTTCCAAT CATGTCTGCGAACTTCCCGTATCGTTGCTAAACTAATCACTGTGTATTTA GAAATACGTTCCTACTGTGTTCGAGAACTACATCACACAAACCACGCACC GAGCCTCAGGCAAGACGGTTGAACTAGCCCTCTGGGATACTGCTGGACAG GAAGAATATGACCGGCTGCGTCCACTTTCATATCCGGAGACGGACCTGTT GTTTGTTTGCTTTGCGATAGATTGCCCTGCATCTCTGGAAAACGTTATGG ACAAGGTAATTCCCAAATTCCCAGCCGTTCCGCGACCAGTTATAGTAGCT AATACCGGCCGCAGTGGTATCCCGAAGTTTTGCACTTTTGTCCCACTACC CCGCTCATTCTGGTTGGGCTGAAGTCAGATTTGCGCTCGAAGAGAACGTG TATTGAACTTCTAAAGACCCAGGGTCTAACGCCTGTGACGCCGGAACAAG GTGAGGCGGTGGCGCGCAGGATGAATGCCTCTTACATAGAGTGTAGTAGC AAAGAAATGCGCGGCGTCGATGGCGTCTTCTCCCTGGCAGTCGATACCGT TGTCTCCGCCGAGGAACAAGACTGGAATGACCGCCAAACGTCTACTACTC CCGGAAGCAAACCTAAAGTCGGTGGTGGTGGCGGAGGAAAGAAGGTCAAA AAGCGTTCCTGCAAGATTCTGTAG
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Coding sequence (CDS) from alignment at An14:1297754..1298727+

>CBS51388_009002-T1 ID=CBS51388_009002-T1|Name=CBS51388_009002-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2556bp|location=Sequence derived from alignment at An14:1297754..1298727+ (Aspergillus niger CBS 513.88)
ATGTCAGGTACAATGTACGACGAGCACGTTTATGCACCCTCACGGCGCCA
TTCAGTTGCTACTCCTCCCCCATCCATGACTCCACGACATAGTCGGACCC
GCAGTCAAAGTGTCAGAGTTAGCAACGGCACCGTGAGCACAAATACAAGC
GTTTCGAGTGGGAGGATGTCGGAAGCTACAAACATTACACATCCACCTGC
GTATTCCAAGAAGTTTGTTGTGGTTGGTGATGGTGGATGTGGAAAGACGT
GCCTTTTGATCAGTTATTCCCAAGGTTATTTCCCAGAGAAATACGTTCCT
ACTGTGTTCGAGAACTACATCACACAAACCACGCACCGAGCCTCAGGCAA
GACGGTTGAACTAGCCCTCTGGGATACTGCTGGACAGGAAGAATATGACC
GGCTGCGTCCACTTTCATATCCGGAGACGGACCTGTTGTTTGTTTGCTTT
GCGATAGATTGCCCTGCATCTCTGGAAAACGTTATGGACAAGTGGTATCC
CGAAGTTTTGCACTTTTGTCCCACTACCCCGCTCATTCTGGTTGGGCTGA
AGTCAGATTTGCGCTCGAAGAGAACGTGTATTGAACTTCTAAAGACCCAG
GGTCTAACGCCTGTGACGCCGGAACAAGGTGAGGCGGTGGCGCGCAGGAT
GAATGCCTCTTACATAGAGTGTAGTAGCAAAGAAATGCGCGGCGTCGATG
GCGTCTTCTCCCTGGCAGTCGATACCGTTGTCTCCGCCGAGGAACAAGAC
TGGAATGACCGCCAAACGTCTACTACTCCCGGAAGCAAACCTAAAGTCGG
TGGTGGTGGCGGAGGAAAGAAGGTCAAAAAGCGTTCCTGCAAGATTCTGT
AGATGTCAGGTACAATGTACGACGAGCACGTTTATGCACCCTCACGGCGC
CATTCAGTTGCTACTCCTCCCCCATCCATGACTCCACGACATAGTCGGAC
CCGCAGTCAAAGTGTCAGAGTTAGCAACGGCACCGTGAGCACAAATACAA
GCGTTTCGAGTGGGAGGATGTCGGAAGCTACAAACATTACACATCCACCT
GCGTATTCCAAGAAGTTTGTTGTGGTTGGTGATGGTGGATGTGGAAAGAC
GTGCCTTTTGATCAGTTATTCCCAAGGTTATTTCCCAGAGAAATACGTTC
CTACTGTGTTCGAGAACTACATCACACAAACCACGCACCGAGCCTCAGGC
AAGACGGTTGAACTAGCCCTCTGGGATACTGCTGGACAGGAAGAATATGA
CCGGCTGCGTCCACTTTCATATCCGGAGACGGACCTGTTGTTTGTTTGCT
TTGCGATAGATTGCCCTGCATCTCTGGAAAACGTTATGGACAAGTGGTAT
CCCGAAGTTTTGCACTTTTGTCCCACTACCCCGCTCATTCTGGTTGGGCT
GAAGTCAGATTTGCGCTCGAAGAGAACGTGTATTGAACTTCTAAAGACCC
AGGGTCTAACGCCTGTGACGCCGGAACAAGGTGAGGCGGTGGCGCGCAGG
ATGAATGCCTCTTACATAGAGTGTAGTAGCAAAGAAATGCGCGGCGTCGA
TGGCGTCTTCTCCCTGGCAGTCGATACCGTTGTCTCCGCCGAGGAACAAG
ACTGGAATGACCGCCAAACGTCTACTACTCCCGGAAGCAAACCTAAAGTC
GGTGGTGGTGGCGGAGGAAAGAAGGTCAAAAAGCGTTCCTGCAAGATTCT
GTAGATGTCAGGTACAATGTACGACGAGCACGTTTATGCACCCTCACGGC
GCCATTCAGTTGCTACTCCTCCCCCATCCATGACTCCACGACATAGTCGG
ACCCGCAGTCAAAGTGTCAGAGTTAGCAACGGCACCGTGAGCACAAATAC
AAGCGTTTCGAGTGGGAGGATGTCGGAAGCTACAAACATTACACATCCAC
CTGCGTATTCCAAGAAGTTTGTTGTGGTTGGTGATGGTGGATGTGGAAAG
ACGTGCCTTTTGATCAGTTATTCCCAAGGTTATTTCCCAGAGAAATACGT
TCCTACTGTGTTCGAGAACTACATCACACAAACCACGCACCGAGCCTCAG
GCAAGACGGTTGAACTAGCCCTCTGGGATACTGCTGGACAGGAAGAATAT
GACCGGCTGCGTCCACTTTCATATCCGGAGACGGACCTGTTGTTTGTTTG
CTTTGCGATAGATTGCCCTGCATCTCTGGAAAACGTTATGGACAAGTGGT
ATCCCGAAGTTTTGCACTTTTGTCCCACTACCCCGCTCATTCTGGTTGGG
CTGAAGTCAGATTTGCGCTCGAAGAGAACGTGTATTGAACTTCTAAAGAC
CCAGGGTCTAACGCCTGTGACGCCGGAACAAGGTGAGGCGGTGGCGCGCA
GGATGAATGCCTCTTACATAGAGTGTAGTAGCAAAGAAATGCGCGGCGTC
GATGGCGTCTTCTCCCTGGCAGTCGATACCGTTGTCTCCGCCGAGGAACA
AGACTGGAATGACCGCCAAACGTCTACTACTCCCGGAAGCAAACCTAAAG
TCGGTGGTGGTGGCGGAGGAAAGAAGGTCAAAAAGCGTTCCTGCAAGATT
CTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009002CBS51388_009002Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009002-T1.exon1CBS51388_009002-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_009002-T1.exon2CBS51388_009002-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_009002-T1.exon3CBS51388_009002-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009002-T1.cdsCBS51388_009002-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009002-T1CBS51388_009002-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003578
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR001806
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:1297754..1298727 +