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Sequences
The following sequences are available for this feature:
mRNA from alignment at An14:1323470..1325511+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009010-T1 ID=CBS51388_009010-T1|Name=CBS51388_009010-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2042bp|location=Sequence derived from alignment at An14:1323470..1325511+ (Aspergillus niger CBS 513.88)
ATGACCATTACACTGAGTGACCAGACACATACTGTGTCTGAGACCTCATC
GACGAACAATGGCATCTCAGGGACAGAATCCAAGAAGTCAGGCACTCGGA
ATGGCCATCCCCAGAGCAACTGCCACCAGCTGCCGCCTCCCCCATCGCAA
CCCACTGCGGAGGGGGAATACCGGTGCGGAATCTGCAACAAGACATACAG
TCGACGTAGGCTACTCTTTTCTTTATGGTTGCACAGTGTTGACACATTTT
CTCCATGACTACTGGCTCCCTTGATCATTCTCAGAGAGACGGCCACTTAA
TGCACACATGTGTGGTTAACAAGATAATAGTTGATCTGCGGGACCGGCAC
CGTCGCCGTTGTATTAAGAACATTGGCCAGGAACGCCAGTCCAAGCGCAA
ATCCTGCGACGCCTGTGCGCAGAAGAAGCTGCGGTGTTCCATGACCCGGC
CCTCCTGTAGCCGATGTATCCAAAGCCGACGGCCTTGCGTGTATCCGCAG
TCTTCTATTCCTGTTCAAGCTCCCAATCTTGATGATGCTCAAGATAATAT
TGTTACGTCTTCCGGCTCCCTTCACTCAGTTTCGGTCTGCGCCGGTATAA
TACCTGGTGGCACGACATGGGCCCTTCCCACATATCCGTTCGACACCCCG
TCTACTGCCGACGAAGTAAATGATGTTTCGGGCTCCTCCTGGAGTCCCGA
AACTCCAACAAATGCCGAACTTGCGTTCCAAACCGTTAACGAGAGTACTA
TGTTTCCCATGCAAGATGTCTCGTTGATGAACTCCCCGCCCTGGCAAGAG
GATCTCCATGAACGGCCCGAAACCCTTGGGCTGGAGGAGTTCTTTTCCGG
GTCGCTTGACAGTTGTTCGCCAGCTATGTATATACCACCGACGATGGGGT
CCTCTCCAGTGACCATGGTACCTCCTACCCCGGCTACTCTCCCGGGCGAC
TCTTATGCTACGGGAGGCGGACTGAGTATGTCATCGGTATCCCCTGGCTA
TTTCGATAATTTCTGGCCCGATAACATGGCGTCCACCGATGAAGACCACG
AAACTTGGCGATTCGGCACGTACACAGATAGCCGGTCCGGATCGGGGTTC
GGCCAAAACTTCCTGCCCAAAACAAGTCATCATAGCCCGGGTGACATCGG
TGATCTCTATCAAGAGCTGTTCAGCTTGTTACGTGAGTACCCCGGGCTGG
CACTGCAGAGACAGTTCTACTCGCCTTTCCTACACCACGAGCTACAAGGG
TATGCGATGCAATCGTTGGGCCAGCCAATTAGCACTACTCTGAGTTCGAT
ATCATCCTATGCTAGTTATCTGGAGGCTTGTGATACATTTGATTTGTCAA
TGCACGATGGGGAGCGGCTCGCAGCAGCAGAAGGCTGCGTGGTAGCGCTT
CATGCTGTCTGTGTTCAACAGATCCTGAGCATTTTCGGCGATAACTTCGC
CACCACCGGCTTCAGCAAGCTCCCAAACTTTGCAGGCGATCAAGGGCATA
CCGAGACTCCTGTTGACATTCTCTTGAGGGTATGTTTCCCCCCACTCCGA
TTGCCCTACGCCCCACCCTATGATTTGAGCTGACCTGAGTGGCCCTAGAT
GACGCAGCGGGTCTACAAACTTCATGAGGACGTTCTTCGCACCCCCCATG
AAGATGAAACAGATTGGCGCCGATGGAAATTCGCCGAATCCCTGCGACGT
AATATTTTCTTCGCCAATATAATCCGAACATTAGCAGGACGGGCCCGCCG
TTACAACGGGATCAACATTGACCCGCTAGATAGCGCGATCCTTCTTCAGC
TGCCGTTGCCGGCGCCGGAGGAAATGTGGCGAGCACGCAGCGAGGGGGAG
TGGATGATAGCCCGCGCACAGACGCAGCGGTCGTGGGCGCGGGGCGTGGA
TGGCAGCATGCTGCCAGCCCTGCGGACCCTACAACAGCTGCTGGTGCTGG
AAGAGGTTGGCAGTGTAAGTGTTACGTTATTGCTTCCCATCACACGCATG
ATTCTGGCGTGTGCCAAGCTCAATGGAGCTTCATATGGCTGA back to topCoding sequence (CDS) from alignment at An14:1323470..1325511+ >CBS51388_009010-T1 ID=CBS51388_009010-T1|Name=CBS51388_009010-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5544bp|location=Sequence derived from alignment at An14:1323470..1325511+ (Aspergillus niger CBS 513.88)
ATGACCATTACACTGAGTGACCAGACACATACTGTGTCTGAGACCTCATC
GACGAACAATGGCATCTCAGGGACAGAATCCAAGAAGTCAGGCACTCGGA
ATGGCCATCCCCAGAGCAACTGCCACCAGCTGCCGCCTCCCCCATCGCAA
CCCACTGCGGAGGGGGAATACCGGTGCGGAATCTGCAACAAGACATACAG
TCGACTTGATCTGCGGGACCGGCACCGTCGCCGTTGTATTAAGAACATTG
GCCAGGAACGCCAGTCCAAGCGCAAATCCTGCGACGCCTGTGCGCAGAAG
AAGCTGCGGTGTTCCATGACCCGGCCCTCCTGTAGCCGATGTATCCAAAG
CCGACGGCCTTGCGTGTATCCGCAGTCTTCTATTCCTGTTCAAGCTCCCA
ATCTTGATGATGCTCAAGATAATATTGTTACGTCTTCCGGCTCCCTTCAC
TCAGTTTCGGTCTGCGCCGGTATAATACCTGGTGGCACGACATGGGCCCT
TCCCACATATCCGTTCGACACCCCGTCTACTGCCGACGAAGTAAATGATG
TTTCGGGCTCCTCCTGGAGTCCCGAAACTCCAACAAATGCCGAACTTGCG
TTCCAAACCGTTAACGAGAGTACTATGTTTCCCATGCAAGATGTCTCGTT
GATGAACTCCCCGCCCTGGCAAGAGGATCTCCATGAACGGCCCGAAACCC
TTGGGCTGGAGGAGTTCTTTTCCGGGTCGCTTGACAGTTGTTCGCCAGCT
ATGTATATACCACCGACGATGGGGTCCTCTCCAGTGACCATGGTACCTCC
TACCCCGGCTACTCTCCCGGGCGACTCTTATGCTACGGGAGGCGGACTGA
GTATGTCATCGGTATCCCCTGGCTATTTCGATAATTTCTGGCCCGATAAC
ATGGCGTCCACCGATGAAGACCACGAAACTTGGCGATTCGGCACGTACAC
AGATAGCCGGTCCGGATCGGGGTTCGGCCAAAACTTCCTGCCCAAAACAA
GTCATCATAGCCCGGGTGACATCGGTGATCTCTATCAAGAGCTGTTCAGC
TTGTTACGTGAGTACCCCGGGCTGGCACTGCAGAGACAGTTCTACTCGCC
TTTCCTACACCACGAGCTACAAGGGTATGCGATGCAATCGTTGGGCCAGC
CAATTAGCACTACTCTGAGTTCGATATCATCCTATGCTAGTTATCTGGAG
GCTTGTGATACATTTGATTTGTCAATGCACGATGGGGAGCGGCTCGCAGC
AGCAGAAGGCTGCGTGGTAGCGCTTCATGCTGTCTGTGTTCAACAGATCC
TGAGCATTTTCGGCGATAACTTCGCCACCACCGGCTTCAGCAAGCTCCCA
AACTTTGCAGGCGATCAAGGGCATACCGAGACTCCTGTTGACATTCTCTT
GAGGATGACGCAGCGGGTCTACAAACTTCATGAGGACGTTCTTCGCACCC
CCCATGAAGATGAAACAGATTGGCGCCGATGGAAATTCGCCGAATCCCTG
CGACGTAATATTTTCTTCGCCAATATAATCCGAACATTAGCAGGACGGGC
CCGCCGTTACAACGGGATCAACATTGACCCGCTAGATAGCGCGATCCTTC
TTCAGCTGCCGTTGCCGGCGCCGGAGGAAATGTGGCGAGCACGCAGCGAG
GGGGAGTGGATGATAGCCCGCGCACAGACGCAGCGGTCGTGGGCGCGGGG
CGTGGATGGCAGCATGCTGCCAGCCCTGCGGACCCTACAACAGCTGCTGG
TGCTGGAAGAGGTTGGCAGTGTAAGTGTTACGTTATTGCTTCCCATCACA
CGCATGATTCTGGCGTGTGCCAAGCTCAATGGAGCTTCATATGGCTGAAT
GACCATTACACTGAGTGACCAGACACATACTGTGTCTGAGACCTCATCGA
CGAACAATGGCATCTCAGGGACAGAATCCAAGAAGTCAGGCACTCGGAAT
GGCCATCCCCAGAGCAACTGCCACCAGCTGCCGCCTCCCCCATCGCAACC
CACTGCGGAGGGGGAATACCGGTGCGGAATCTGCAACAAGACATACAGTC
GACTTGATCTGCGGGACCGGCACCGTCGCCGTTGTATTAAGAACATTGGC
CAGGAACGCCAGTCCAAGCGCAAATCCTGCGACGCCTGTGCGCAGAAGAA
GCTGCGGTGTTCCATGACCCGGCCCTCCTGTAGCCGATGTATCCAAAGCC
GACGGCCTTGCGTGTATCCGCAGTCTTCTATTCCTGTTCAAGCTCCCAAT
CTTGATGATGCTCAAGATAATATTGTTACGTCTTCCGGCTCCCTTCACTC
AGTTTCGGTCTGCGCCGGTATAATACCTGGTGGCACGACATGGGCCCTTC
CCACATATCCGTTCGACACCCCGTCTACTGCCGACGAAGTAAATGATGTT
TCGGGCTCCTCCTGGAGTCCCGAAACTCCAACAAATGCCGAACTTGCGTT
CCAAACCGTTAACGAGAGTACTATGTTTCCCATGCAAGATGTCTCGTTGA
TGAACTCCCCGCCCTGGCAAGAGGATCTCCATGAACGGCCCGAAACCCTT
GGGCTGGAGGAGTTCTTTTCCGGGTCGCTTGACAGTTGTTCGCCAGCTAT
GTATATACCACCGACGATGGGGTCCTCTCCAGTGACCATGGTACCTCCTA
CCCCGGCTACTCTCCCGGGCGACTCTTATGCTACGGGAGGCGGACTGAGT
ATGTCATCGGTATCCCCTGGCTATTTCGATAATTTCTGGCCCGATAACAT
GGCGTCCACCGATGAAGACCACGAAACTTGGCGATTCGGCACGTACACAG
ATAGCCGGTCCGGATCGGGGTTCGGCCAAAACTTCCTGCCCAAAACAAGT
CATCATAGCCCGGGTGACATCGGTGATCTCTATCAAGAGCTGTTCAGCTT
GTTACGTGAGTACCCCGGGCTGGCACTGCAGAGACAGTTCTACTCGCCTT
TCCTACACCACGAGCTACAAGGGTATGCGATGCAATCGTTGGGCCAGCCA
ATTAGCACTACTCTGAGTTCGATATCATCCTATGCTAGTTATCTGGAGGC
TTGTGATACATTTGATTTGTCAATGCACGATGGGGAGCGGCTCGCAGCAG
CAGAAGGCTGCGTGGTAGCGCTTCATGCTGTCTGTGTTCAACAGATCCTG
AGCATTTTCGGCGATAACTTCGCCACCACCGGCTTCAGCAAGCTCCCAAA
CTTTGCAGGCGATCAAGGGCATACCGAGACTCCTGTTGACATTCTCTTGA
GGATGACGCAGCGGGTCTACAAACTTCATGAGGACGTTCTTCGCACCCCC
CATGAAGATGAAACAGATTGGCGCCGATGGAAATTCGCCGAATCCCTGCG
ACGTAATATTTTCTTCGCCAATATAATCCGAACATTAGCAGGACGGGCCC
GCCGTTACAACGGGATCAACATTGACCCGCTAGATAGCGCGATCCTTCTT
CAGCTGCCGTTGCCGGCGCCGGAGGAAATGTGGCGAGCACGCAGCGAGGG
GGAGTGGATGATAGCCCGCGCACAGACGCAGCGGTCGTGGGCGCGGGGCG
TGGATGGCAGCATGCTGCCAGCCCTGCGGACCCTACAACAGCTGCTGGTG
CTGGAAGAGGTTGGCAGTGTAAGTGTTACGTTATTGCTTCCCATCACACG
CATGATTCTGGCGTGTGCCAAGCTCAATGGAGCTTCATATGGCTGAATGA
CCATTACACTGAGTGACCAGACACATACTGTGTCTGAGACCTCATCGACG
AACAATGGCATCTCAGGGACAGAATCCAAGAAGTCAGGCACTCGGAATGG
CCATCCCCAGAGCAACTGCCACCAGCTGCCGCCTCCCCCATCGCAACCCA
CTGCGGAGGGGGAATACCGGTGCGGAATCTGCAACAAGACATACAGTCGA
CTTGATCTGCGGGACCGGCACCGTCGCCGTTGTATTAAGAACATTGGCCA
GGAACGCCAGTCCAAGCGCAAATCCTGCGACGCCTGTGCGCAGAAGAAGC
TGCGGTGTTCCATGACCCGGCCCTCCTGTAGCCGATGTATCCAAAGCCGA
CGGCCTTGCGTGTATCCGCAGTCTTCTATTCCTGTTCAAGCTCCCAATCT
TGATGATGCTCAAGATAATATTGTTACGTCTTCCGGCTCCCTTCACTCAG
TTTCGGTCTGCGCCGGTATAATACCTGGTGGCACGACATGGGCCCTTCCC
ACATATCCGTTCGACACCCCGTCTACTGCCGACGAAGTAAATGATGTTTC
GGGCTCCTCCTGGAGTCCCGAAACTCCAACAAATGCCGAACTTGCGTTCC
AAACCGTTAACGAGAGTACTATGTTTCCCATGCAAGATGTCTCGTTGATG
AACTCCCCGCCCTGGCAAGAGGATCTCCATGAACGGCCCGAAACCCTTGG
GCTGGAGGAGTTCTTTTCCGGGTCGCTTGACAGTTGTTCGCCAGCTATGT
ATATACCACCGACGATGGGGTCCTCTCCAGTGACCATGGTACCTCCTACC
CCGGCTACTCTCCCGGGCGACTCTTATGCTACGGGAGGCGGACTGAGTAT
GTCATCGGTATCCCCTGGCTATTTCGATAATTTCTGGCCCGATAACATGG
CGTCCACCGATGAAGACCACGAAACTTGGCGATTCGGCACGTACACAGAT
AGCCGGTCCGGATCGGGGTTCGGCCAAAACTTCCTGCCCAAAACAAGTCA
TCATAGCCCGGGTGACATCGGTGATCTCTATCAAGAGCTGTTCAGCTTGT
TACGTGAGTACCCCGGGCTGGCACTGCAGAGACAGTTCTACTCGCCTTTC
CTACACCACGAGCTACAAGGGTATGCGATGCAATCGTTGGGCCAGCCAAT
TAGCACTACTCTGAGTTCGATATCATCCTATGCTAGTTATCTGGAGGCTT
GTGATACATTTGATTTGTCAATGCACGATGGGGAGCGGCTCGCAGCAGCA
GAAGGCTGCGTGGTAGCGCTTCATGCTGTCTGTGTTCAACAGATCCTGAG
CATTTTCGGCGATAACTTCGCCACCACCGGCTTCAGCAAGCTCCCAAACT
TTGCAGGCGATCAAGGGCATACCGAGACTCCTGTTGACATTCTCTTGAGG
ATGACGCAGCGGGTCTACAAACTTCATGAGGACGTTCTTCGCACCCCCCA
TGAAGATGAAACAGATTGGCGCCGATGGAAATTCGCCGAATCCCTGCGAC
GTAATATTTTCTTCGCCAATATAATCCGAACATTAGCAGGACGGGCCCGC
CGTTACAACGGGATCAACATTGACCCGCTAGATAGCGCGATCCTTCTTCA
GCTGCCGTTGCCGGCGCCGGAGGAAATGTGGCGAGCACGCAGCGAGGGGG
AGTGGATGATAGCCCGCGCACAGACGCAGCGGTCGTGGGCGCGGGGCGTG
GATGGCAGCATGCTGCCAGCCCTGCGGACCCTACAACAGCTGCTGGTGCT
GGAAGAGGTTGGCAGTGTAAGTGTTACGTTATTGCTTCCCATCACACGCA
TGATTCTGGCGTGTGCCAAGCTCAATGGAGCTTCATATGGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An14 | supercontig | An14:1323470..1325511 + |
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