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CBS51388_009017-T1, CBS51388_009017-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009017-T1
Unique NameCBS51388_009017-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:1348819..1351344+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009017-T1 ID=CBS51388_009017-T1|Name=CBS51388_009017-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2526bp|location=Sequence derived from alignment at An14:1348819..1351344+ (Aspergillus niger CBS 513.88)
ATGAGAGGCTTGAATCTCTTTCAATTAATACTGGCTCTTCTGCTGTCCAT
GGTAGCAGCCGAGGATGGGTACGATGGCTGGCTCAGATATGCTCCCGTGT
CCTGCGATCTGCATTGTCAACAGGCTCTACCGTCTCATGTTGTGTTGTTG
AACAGCACCAAAGGAAGCCCAATCGAGACCGCCGGACGAGAATTGAAAGC
GGGATTCCAATCGATTCTTTCGACGAACTTGACATCTCGTCCATTTCAAT
GCAATAGCTCCGCATCAATTCTGGTGGCTACTCTGGATGAGTACCGCCAA
AGATGCCGGGACATTAATGTGCCTGAGCTCGATCCCGATGGCTTCTGGTT
ACAATCCGAAGGGGACACAGTTCGGATCTTAGGCAAGGATGCCAGAGGAG
CCTTGTACGGAGCATACGAATATCTAGCTATGGTGGCACAGCGAAATTTT
TCTCGTGTCGCGTATGCCACGAGCCCACATGCGCCGATCCGTTGGGTGAA
TCAATGGGACAACATGGACGGAAGCATTGAACGAGGATACGGTGGTGCGT
CGATATTCTTCAAAGATGGCACGGTGGTGGAAGACATGGCTCCTGTTGAG
CAATATGCTAGACTGCTTGCATCCATCCGGATAAATGCAATTGTCGTCAA
TAATGTCAATGCGAACGCAACACTACTGCTACCCGAGAATATGAAAGGCC
TGAGTCGTATAGCAGATGCATGTCGACCATACGGCGTTCAAATCGGCATA
TCGCTGAACTTTGCTTCACCCGAAGCCTTGGGTGGTTTAAATACTTATGA
TCCACTCGATCCTGGTGTCATTGCATGGTGGCAGAATATCACTGATAGTC
TCTATACCTATGTACCAGACATGGCTGGGTACCTCGTCAAAGCCGACTCA
GAGGGCCAGCCAGGTCCTGATACATACAATCGCACACTCTCACAAGGGGC
AAATCTGTTCGCTCGTGCCCTGCAACCGTATGGGGGTGTGCTTATGTACC
GTGCTTTCGTCTATGATGACAACTTGAACGAATCAGACTGGAAGGCTGAT
CGTGCTAAGGCAGCAGTGGAGTATTTCAAGGACCTGGACGGTCAATTCGA
GGAGAACGTCGTGATCCAAATAAAGTACGGCCCGATCGACTTCCAAGTGC
GCGAGCCTACCTCACCACTTTTTGCCAACCTCTACCACACCAACACAGCC
ATAGAGTTGGAGGTTAGTCAGGAGTACCTGGGGCAGCAATGCCATTTGGT
GTACTTACCTCCGCTCTGGAAGACGGTCCTGGATTTCGACTTACGCGTAG
ACCACAAGCCATCGATGGTCCGCGATATCATATCCGGTCAGCGCTTCAAC
AGAACGCTCGGAGGCTGGGCAGCTGTCGTTAATGTGGGCACCAACAGAAC
ATGGCTGGGTAGCCACCTTGCTATGTCCAATCTGTACGCTTACGGTCGTT
TGGCGTGGAGTCCGACAGACGAATCTGAGCAGATCCTCGAAGACTGGACT
CGCCTCACATTTGGACAAAATCACCATGTCATTAACACTATCTCCGATAT
GTCAATGACCTCCTGGCCTGCCTATGAAAACTATACCGGCAACCTGGGCA
TACAGACACTGACAGACATCTTGTATACCCACTATGGTCCAAATCCAGCT
ACACAGGATAACAATGGCTGGGGTCAATGGACACGTGCTGATCATGATTC
TGTCGGTATGGATCGCACAATATGGAACGGCACCGGCTATACCGGTCAAT
ACCCGGAGGAGGTTGCTCGCGTATACGAATCACTAGAAAGCACGCCAGAT
GACCTAGTATTGTGGTTTCACCATGTACCATGGACGCACCGTCTGCACTC
CGGAGTGACTGTTATCCAGCATTTCTACAACGCTCACTATGCGGGCGCAG
AAGCTGCACACGGATTCGTCAGACAATGGGAGTCTTTGGAAGGGCTCATT
GACCGGGAGCGATACGAAGCCATGCGGTCGCGACTGGTCTACCAGGCGGG
ACACTCCATTGTCTGGCGAGATGCTATCAATAATTTCTACTACAACATGA
CCGGAATCCCAGATGTGGCTGGACGTGTGGGTCACCATCCGTGGCGCATT
GAAGCCGAGAGTATGGGATTAGATGGATACCAGACGTATACGGTCAGTCC
GTTCGAGGCTGCTTCTAATACTACAGCAATTATTACCACTTCTAATTCAA
CGACTGGGACGGCGAGAACTAGCATCAAGGCCCCATCAGGAGTATACGAC
ATAGGGGTGAACTACTACGATCTCTATGGCGGTCAATCGAAGTGGACACT
ATCTGTGGGTGATAAGGTAGTGGGCCAATGGCTTGGGGATATGGAGCATA
ATTCCCTAGGCCATACACCATCTATATACTTGGGTGGTCACTCCGCCACT
CGGATTACGTTTCATGGGGTCGGCATTCGGCAGGGTGATCAGCTGAAGAT
TGTTGGTGAGGCGAATGGGGTCGAGCCCGCTCCCCTGGATTATATAGTGC
TACTGCCCCCAGGCTTAGTTGACTGA
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Coding sequence (CDS) from alignment at An14:1348819..1351344+

>CBS51388_009017-T1 ID=CBS51388_009017-T1|Name=CBS51388_009017-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2526bp|location=Sequence derived from alignment at An14:1348819..1351344+ (Aspergillus niger CBS 513.88)
ATGAGAGGCTTGAATCTCTTTCAATTAATACTGGCTCTTCTGCTGTCCAT
GGTAGCAGCCGAGGATGGGTACGATGGCTGGCTCAGATATGCTCCCGTGT
CCTGCGATCTGCATTGTCAACAGGCTCTACCGTCTCATGTTGTGTTGTTG
AACAGCACCAAAGGAAGCCCAATCGAGACCGCCGGACGAGAATTGAAAGC
GGGATTCCAATCGATTCTTTCGACGAACTTGACATCTCGTCCATTTCAAT
GCAATAGCTCCGCATCAATTCTGGTGGCTACTCTGGATGAGTACCGCCAA
AGATGCCGGGACATTAATGTGCCTGAGCTCGATCCCGATGGCTTCTGGTT
ACAATCCGAAGGGGACACAGTTCGGATCTTAGGCAAGGATGCCAGAGGAG
CCTTGTACGGAGCATACGAATATCTAGCTATGGTGGCACAGCGAAATTTT
TCTCGTGTCGCGTATGCCACGAGCCCACATGCGCCGATCCGTTGGGTGAA
TCAATGGGACAACATGGACGGAAGCATTGAACGAGGATACGGTGGTGCGT
CGATATTCTTCAAAGATGGCACGGTGGTGGAAGACATGGCTCCTGTTGAG
CAATATGCTAGACTGCTTGCATCCATCCGGATAAATGCAATTGTCGTCAA
TAATGTCAATGCGAACGCAACACTACTGCTACCCGAGAATATGAAAGGCC
TGAGTCGTATAGCAGATGCATGTCGACCATACGGCGTTCAAATCGGCATA
TCGCTGAACTTTGCTTCACCCGAAGCCTTGGGTGGTTTAAATACTTATGA
TCCACTCGATCCTGGTGTCATTGCATGGTGGCAGAATATCACTGATAGTC
TCTATACCTATGTACCAGACATGGCTGGGTACCTCGTCAAAGCCGACTCA
GAGGGCCAGCCAGGTCCTGATACATACAATCGCACACTCTCACAAGGGGC
AAATCTGTTCGCTCGTGCCCTGCAACCGTATGGGGGTGTGCTTATGTACC
GTGCTTTCGTCTATGATGACAACTTGAACGAATCAGACTGGAAGGCTGAT
CGTGCTAAGGCAGCAGTGGAGTATTTCAAGGACCTGGACGGTCAATTCGA
GGAGAACGTCGTGATCCAAATAAAGTACGGCCCGATCGACTTCCAAGTGC
GCGAGCCTACCTCACCACTTTTTGCCAACCTCTACCACACCAACACAGCC
ATAGAGTTGGAGGTTAGTCAGGAGTACCTGGGGCAGCAATGCCATTTGGT
GTACTTACCTCCGCTCTGGAAGACGGTCCTGGATTTCGACTTACGCGTAG
ACCACAAGCCATCGATGGTCCGCGATATCATATCCGGTCAGCGCTTCAAC
AGAACGCTCGGAGGCTGGGCAGCTGTCGTTAATGTGGGCACCAACAGAAC
ATGGCTGGGTAGCCACCTTGCTATGTCCAATCTGTACGCTTACGGTCGTT
TGGCGTGGAGTCCGACAGACGAATCTGAGCAGATCCTCGAAGACTGGACT
CGCCTCACATTTGGACAAAATCACCATGTCATTAACACTATCTCCGATAT
GTCAATGACCTCCTGGCCTGCCTATGAAAACTATACCGGCAACCTGGGCA
TACAGACACTGACAGACATCTTGTATACCCACTATGGTCCAAATCCAGCT
ACACAGGATAACAATGGCTGGGGTCAATGGACACGTGCTGATCATGATTC
TGTCGGTATGGATCGCACAATATGGAACGGCACCGGCTATACCGGTCAAT
ACCCGGAGGAGGTTGCTCGCGTATACGAATCACTAGAAAGCACGCCAGAT
GACCTAGTATTGTGGTTTCACCATGTACCATGGACGCACCGTCTGCACTC
CGGAGTGACTGTTATCCAGCATTTCTACAACGCTCACTATGCGGGCGCAG
AAGCTGCACACGGATTCGTCAGACAATGGGAGTCTTTGGAAGGGCTCATT
GACCGGGAGCGATACGAAGCCATGCGGTCGCGACTGGTCTACCAGGCGGG
ACACTCCATTGTCTGGCGAGATGCTATCAATAATTTCTACTACAACATGA
CCGGAATCCCAGATGTGGCTGGACGTGTGGGTCACCATCCGTGGCGCATT
GAAGCCGAGAGTATGGGATTAGATGGATACCAGACGTATACGGTCAGTCC
GTTCGAGGCTGCTTCTAATACTACAGCAATTATTACCACTTCTAATTCAA
CGACTGGGACGGCGAGAACTAGCATCAAGGCCCCATCAGGAGTATACGAC
ATAGGGGTGAACTACTACGATCTCTATGGCGGTCAATCGAAGTGGACACT
ATCTGTGGGTGATAAGGTAGTGGGCCAATGGCTTGGGGATATGGAGCATA
ATTCCCTAGGCCATACACCATCTATATACTTGGGTGGTCACTCCGCCACT
CGGATTACGTTTCATGGGGTCGGCATTCGGCAGGGTGATCAGCTGAAGAT
TGTTGGTGAGGCGAATGGGGTCGAGCCCGCTCCCCTGGATTATATAGTGC
TACTGCCCCCAGGCTTAGTTGACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0046559alpha-glucuronidase activity
Vocabulary: Biological Process
TermDefinition
GO:0045493xylan catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009017CBS51388_009017Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009017-T1.exon1CBS51388_009017-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009017-T1.cdsCBS51388_009017-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009017-T1CBS51388_009017-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
NoteCAZy:GH67
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR037054
DBxrefInterPro:IPR011100
DBxrefInterPro:IPR011395
DBxrefInterPro:IPR011099
DBxrefInterPro:IPR029018
DBxrefInterPro:IPR005154
DBxrefPFAM:PF03648
DBxrefPFAM:PF07488
DBxrefPFAM:PF07477
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:1348819..1351344 +
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