You are here

Home

CBS51388_009044-T1, CBS51388_009044-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009044-T1
Unique NameCBS51388_009044-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:1429151..1431115+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009044-T1 ID=CBS51388_009044-T1|Name=CBS51388_009044-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1965bp|location=Sequence derived from alignment at An14:1429151..1431115+ (Aspergillus niger CBS 513.88)
ATGTCGACCGTCTCTGACAGTGGGACCTTGCCAGACACTCCCTTGCTGGG
CTCGCATGACAGCAAGGTTTATGAGGCCCACCTAGCCACCATGAAGGAGA
TTGTGTCTCAGTTGAGATACCTTCCTGTCATTGAAAAGTGTCTCCATCAG
TACTACTCTGCTAAGCATAACTCACTTGTACCCAAACCAGTCGTTCTGCA
CCTTCTCAAAGCGCTCCGTACAGATCTAGTATCGTCGGGCTATATTTTTG
GAGAAACGGGAGATCGAGTTGAGTTGGGCGATATTTCGCGGTTATCAGAA
TCTATACTGCTCTCTTCCTCTACAGAGGTTATCATCACCGCATCCTTGGA
CCTGCATGGTTTCTTGGCCTTGTTCTGTGGCCCGAATCTTCGAGTCGAGA
CTCTCGGTCTTTTGTATACTATGGCTGCCCGTGCTTCGGCTTTTTTCGTT
GACCGCGACGAGGGTAAGGATGCCGCATTTGTCCCAGACATGGTTTGGTA
TAGCACGGTGATCTTACGACTAGCTCGGGACCTTGCACCCCAGTCAAACG
ACGTCATTATATGGTTGGCGAATGAAAATGCACAGCTCAGGTCATTCCTT
GAAGGAGATACGAGTGAGCCCCTTTATACGTATCGTGAATGGGTGGATAC
TGATTGATTTCAGGCCTCGGTGTGTGGCGTCTGGTGGGCGATCTCTCGAC
CGATTTATTGGCTCTGGGCTTGAACAGGGAAGCGACATATTCCCCCGAGA
GAACCCCGTTTTTTCTTGCAGAGTGCCGGAGGAGGTGCTTTGTGACTGAA
TATTACCTGGAGAAGATGTTTGGCCTGATATTCAATCTAACTCCTCGCAT
TACCTCTCGATATGTGGACGTCAAGCTCCCCCTTGATTTGTCAGATGACG
AACTTTTTGCCCAAATTCCCCAGGAACTAGAGGATGCAAAAAGTCGACTC
ACAAAAGATGGCTGGAACACAGATGGGAACCTTAGAGCAGCAACCTGGGC
TCGATTGCGCTATATTTTAAGTCAGTTTCGGGAAGGGATTGTGGAATATC
GTTTCCAAGCATCACAGGCAGCTGACCCTGCCCAACTCAGGTGTGTACAA
TCATTCGGACAAAGGTTGAACAGCACTAATGCTGTTTCAGAGAATTGTCT
TCTCGATGTCGTCAGACGTGGGATAACCTGCTTCCTCACCTAAGATATAC
TCAGGACTGTTGGGAATCCGACATGCCCCTGAGCACTTGTTATATGCATG
CGAAGGTTCATCTAGCCTATCTCCAAATCCATTTCCAGATATACCACCTT
CTTGGAGAGAATAGCTCAACTCCGCTTCCCGAGCTGCTGGACGTGTCTGC
AAACATTCTGGAGACAGTGGTTCGGTTGGGAAATACCCGCAGAATGGGCG
CCTTTACCTCGCATGATCTACCTGAAATCGTACGTCCTGCTCTACCCCTT
TACCGATCATCTTTTTTGTCATAGCTGACAGGGTGAAGCTTCTGGCCTGC
GGCTTGCCGTCCGCGGCAGTCCTCCTGACTACACTAGAGAACAATACGCA
AGATCCTTCAAGTACCCATCCGCCTGGCATAAAGACATCAGCCGTGATTC
GCAATGTTTCCGTCCTTACGTCGCAACTCGAAAGGGTGGCTAGTTCGCGG
GAAAGAAATCAAGCCTTCTGCTTGCAGGCGGCAAAGGCCTTCACGAAGAA
ATTAGACAAGATTCTGGACAGGCTTGCGACGTCAAAGTTTCAGGCTCGGA
CAAGTCCTGATGTTGCGACAAGAGTTGACGTAATGGACTCGATGCCGACT
CCAATCACTGATCTTGACGCTTCTCTCACTGGTGGAGAGAGTGCTGGAGA
TGGGGATAGAGAGATTGGTGCTTTCAATCTGGAGGACTACGAGAATCTCG
ATCTAATGTCTTGGGCGATCGATTTTGACCTTGGAAACACGGCCAGCGAC
TGGACAATGATGTAA
back to top

Coding sequence (CDS) from alignment at An14:1429151..1431115+

>CBS51388_009044-T1 ID=CBS51388_009044-T1|Name=CBS51388_009044-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7224bp|location=Sequence derived from alignment at An14:1429151..1431115+ (Aspergillus niger CBS 513.88)
ATGTCGACCGTCTCTGACAGTGGGACCTTGCCAGACACTCCCTTGCTGGG
CTCGCATGACAGCAAGGTTTATGAGGCCCACCTAGCCACCATGAAGGAGA
TTGTGTCTCAGTTGAGATACCTTCCTGTCATTGAAAAGTGTCTCCATCAG
TACTACTCTGCTAAGCATAACTCACTTGTACCCAAACCAGTCGTTCTGCA
CCTTCTCAAAGCGCTCCGTACAGATCTAGTATCGTCGGGCTATATTTTTG
GAGAAACGGGAGATCGAGTTGAGTTGGGCGATATTTCGCGGTTATCAGAA
TCTATACTGCTCTCTTCCTCTACAGAGGTTATCATCACCGCATCCTTGGA
CCTGCATGGTTTCTTGGCCTTGTTCTGTGGCCCGAATCTTCGAGTCGAGA
CTCTCGGTCTTTTGTATACTATGGCTGCCCGTGCTTCGGCTTTTTTCGTT
GACCGCGACGAGGGTAAGGATGCCGCATTTGTCCCAGACATGGTTTGGTA
TAGCACGGTGATCTTACGACTAGCTCGGGACCTTGCACCCCAGTCAAACG
ACGTCATTATATGGTTGGCGAATGAAAATGCACAGCTCAGGTCATTCCTT
GAAGGAGATACGAGCCTCGGTGTGTGGCGTCTGGTGGGCGATCTCTCGAC
CGATTTATTGGCTCTGGGCTTGAACAGGGAAGCGACATATTCCCCCGAGA
GAACCCCGTTTTTTCTTGCAGAGTGCCGGAGGAGGTGCTTTGTGACTGAA
TATTACCTGGAGAAGATGTTTGGCCTGATATTCAATCTAACTCCTCGCAT
TACCTCTCGATATGTGGACGTCAAGCTCCCCCTTGATTTGTCAGATGACG
AACTTTTTGCCCAAATTCCCCAGGAACTAGAGGATGCAAAAAGTCGACTC
ACAAAAGATGGCTGGAACACAGATGGGAACCTTAGAGCAGCAACCTGGGC
TCGATTGCGCTATATTTTAAGTCAGTTTCGGGAAGGGATTGTGGAATATC
GTTTCCAAGCATCACAGGCAGCTGACCCTGCCCAACTCAGAGAATTGTCT
TCTCGATGTCGTCAGACGTGGGATAACCTGCTTCCTCACCTAAGATATAC
TCAGGACTGTTGGGAATCCGACATGCCCCTGAGCACTTGTTATATGCATG
CGAAGGTTCATCTAGCCTATCTCCAAATCCATTTCCAGATATACCACCTT
CTTGGAGAGAATAGCTCAACTCCGCTTCCCGAGCTGCTGGACGTGTCTGC
AAACATTCTGGAGACAGTGGTTCGGTTGGGAAATACCCGCAGAATGGGCG
CCTTTACCTCGCATGATCTACCTGAAATCCTTCTGGCCTGCGGCTTGCCG
TCCGCGGCAGTCCTCCTGACTACACTAGAGAACAATACGCAAGATCCTTC
AAGTACCCATCCGCCTGGCATAAAGACATCAGCCGTGATTCGCAATGTTT
CCGTCCTTACGTCGCAACTCGAAAGGGTGGCTAGTTCGCGGGAAAGAAAT
CAAGCCTTCTGCTTGCAGGCGGCAAAGGCCTTCACGAAGAAATTAGACAA
GATTCTGGACAGGCTTGCGACGTCAAAGTTTCAGGCTCGGACAAGTCCTG
ATGTTGCGACAAGAGTTGACGTAATGGACTCGATGCCGACTCCAATCACT
GATCTTGACGCTTCTCTCACTGGTGGAGAGAGTGCTGGAGATGGGGATAG
AGAGATTGGTGCTTTCAATCTGGAGGACTACGAGAATCTCGATCTAATGT
CTTGGGCGATCGATTTTGACCTTGGAAACACGGCCAGCGACTGGACAATG
ATGTAAATGTCGACCGTCTCTGACAGTGGGACCTTGCCAGACACTCCCTT
GCTGGGCTCGCATGACAGCAAGGTTTATGAGGCCCACCTAGCCACCATGA
AGGAGATTGTGTCTCAGTTGAGATACCTTCCTGTCATTGAAAAGTGTCTC
CATCAGTACTACTCTGCTAAGCATAACTCACTTGTACCCAAACCAGTCGT
TCTGCACCTTCTCAAAGCGCTCCGTACAGATCTAGTATCGTCGGGCTATA
TTTTTGGAGAAACGGGAGATCGAGTTGAGTTGGGCGATATTTCGCGGTTA
TCAGAATCTATACTGCTCTCTTCCTCTACAGAGGTTATCATCACCGCATC
CTTGGACCTGCATGGTTTCTTGGCCTTGTTCTGTGGCCCGAATCTTCGAG
TCGAGACTCTCGGTCTTTTGTATACTATGGCTGCCCGTGCTTCGGCTTTT
TTCGTTGACCGCGACGAGGGTAAGGATGCCGCATTTGTCCCAGACATGGT
TTGGTATAGCACGGTGATCTTACGACTAGCTCGGGACCTTGCACCCCAGT
CAAACGACGTCATTATATGGTTGGCGAATGAAAATGCACAGCTCAGGTCA
TTCCTTGAAGGAGATACGAGCCTCGGTGTGTGGCGTCTGGTGGGCGATCT
CTCGACCGATTTATTGGCTCTGGGCTTGAACAGGGAAGCGACATATTCCC
CCGAGAGAACCCCGTTTTTTCTTGCAGAGTGCCGGAGGAGGTGCTTTGTG
ACTGAATATTACCTGGAGAAGATGTTTGGCCTGATATTCAATCTAACTCC
TCGCATTACCTCTCGATATGTGGACGTCAAGCTCCCCCTTGATTTGTCAG
ATGACGAACTTTTTGCCCAAATTCCCCAGGAACTAGAGGATGCAAAAAGT
CGACTCACAAAAGATGGCTGGAACACAGATGGGAACCTTAGAGCAGCAAC
CTGGGCTCGATTGCGCTATATTTTAAGTCAGTTTCGGGAAGGGATTGTGG
AATATCGTTTCCAAGCATCACAGGCAGCTGACCCTGCCCAACTCAGAGAA
TTGTCTTCTCGATGTCGTCAGACGTGGGATAACCTGCTTCCTCACCTAAG
ATATACTCAGGACTGTTGGGAATCCGACATGCCCCTGAGCACTTGTTATA
TGCATGCGAAGGTTCATCTAGCCTATCTCCAAATCCATTTCCAGATATAC
CACCTTCTTGGAGAGAATAGCTCAACTCCGCTTCCCGAGCTGCTGGACGT
GTCTGCAAACATTCTGGAGACAGTGGTTCGGTTGGGAAATACCCGCAGAA
TGGGCGCCTTTACCTCGCATGATCTACCTGAAATCCTTCTGGCCTGCGGC
TTGCCGTCCGCGGCAGTCCTCCTGACTACACTAGAGAACAATACGCAAGA
TCCTTCAAGTACCCATCCGCCTGGCATAAAGACATCAGCCGTGATTCGCA
ATGTTTCCGTCCTTACGTCGCAACTCGAAAGGGTGGCTAGTTCGCGGGAA
AGAAATCAAGCCTTCTGCTTGCAGGCGGCAAAGGCCTTCACGAAGAAATT
AGACAAGATTCTGGACAGGCTTGCGACGTCAAAGTTTCAGGCTCGGACAA
GTCCTGATGTTGCGACAAGAGTTGACGTAATGGACTCGATGCCGACTCCA
ATCACTGATCTTGACGCTTCTCTCACTGGTGGAGAGAGTGCTGGAGATGG
GGATAGAGAGATTGGTGCTTTCAATCTGGAGGACTACGAGAATCTCGATC
TAATGTCTTGGGCGATCGATTTTGACCTTGGAAACACGGCCAGCGACTGG
ACAATGATGTAAATGTCGACCGTCTCTGACAGTGGGACCTTGCCAGACAC
TCCCTTGCTGGGCTCGCATGACAGCAAGGTTTATGAGGCCCACCTAGCCA
CCATGAAGGAGATTGTGTCTCAGTTGAGATACCTTCCTGTCATTGAAAAG
TGTCTCCATCAGTACTACTCTGCTAAGCATAACTCACTTGTACCCAAACC
AGTCGTTCTGCACCTTCTCAAAGCGCTCCGTACAGATCTAGTATCGTCGG
GCTATATTTTTGGAGAAACGGGAGATCGAGTTGAGTTGGGCGATATTTCG
CGGTTATCAGAATCTATACTGCTCTCTTCCTCTACAGAGGTTATCATCAC
CGCATCCTTGGACCTGCATGGTTTCTTGGCCTTGTTCTGTGGCCCGAATC
TTCGAGTCGAGACTCTCGGTCTTTTGTATACTATGGCTGCCCGTGCTTCG
GCTTTTTTCGTTGACCGCGACGAGGGTAAGGATGCCGCATTTGTCCCAGA
CATGGTTTGGTATAGCACGGTGATCTTACGACTAGCTCGGGACCTTGCAC
CCCAGTCAAACGACGTCATTATATGGTTGGCGAATGAAAATGCACAGCTC
AGGTCATTCCTTGAAGGAGATACGAGCCTCGGTGTGTGGCGTCTGGTGGG
CGATCTCTCGACCGATTTATTGGCTCTGGGCTTGAACAGGGAAGCGACAT
ATTCCCCCGAGAGAACCCCGTTTTTTCTTGCAGAGTGCCGGAGGAGGTGC
TTTGTGACTGAATATTACCTGGAGAAGATGTTTGGCCTGATATTCAATCT
AACTCCTCGCATTACCTCTCGATATGTGGACGTCAAGCTCCCCCTTGATT
TGTCAGATGACGAACTTTTTGCCCAAATTCCCCAGGAACTAGAGGATGCA
AAAAGTCGACTCACAAAAGATGGCTGGAACACAGATGGGAACCTTAGAGC
AGCAACCTGGGCTCGATTGCGCTATATTTTAAGTCAGTTTCGGGAAGGGA
TTGTGGAATATCGTTTCCAAGCATCACAGGCAGCTGACCCTGCCCAACTC
AGAGAATTGTCTTCTCGATGTCGTCAGACGTGGGATAACCTGCTTCCTCA
CCTAAGATATACTCAGGACTGTTGGGAATCCGACATGCCCCTGAGCACTT
GTTATATGCATGCGAAGGTTCATCTAGCCTATCTCCAAATCCATTTCCAG
ATATACCACCTTCTTGGAGAGAATAGCTCAACTCCGCTTCCCGAGCTGCT
GGACGTGTCTGCAAACATTCTGGAGACAGTGGTTCGGTTGGGAAATACCC
GCAGAATGGGCGCCTTTACCTCGCATGATCTACCTGAAATCCTTCTGGCC
TGCGGCTTGCCGTCCGCGGCAGTCCTCCTGACTACACTAGAGAACAATAC
GCAAGATCCTTCAAGTACCCATCCGCCTGGCATAAAGACATCAGCCGTGA
TTCGCAATGTTTCCGTCCTTACGTCGCAACTCGAAAGGGTGGCTAGTTCG
CGGGAAAGAAATCAAGCCTTCTGCTTGCAGGCGGCAAAGGCCTTCACGAA
GAAATTAGACAAGATTCTGGACAGGCTTGCGACGTCAAAGTTTCAGGCTC
GGACAAGTCCTGATGTTGCGACAAGAGTTGACGTAATGGACTCGATGCCG
ACTCCAATCACTGATCTTGACGCTTCTCTCACTGGTGGAGAGAGTGCTGG
AGATGGGGATAGAGAGATTGGTGCTTTCAATCTGGAGGACTACGAGAATC
TCGATCTAATGTCTTGGGCGATCGATTTTGACCTTGGAAACACGGCCAGC
GACTGGACAATGATGTAAATGTCGACCGTCTCTGACAGTGGGACCTTGCC
AGACACTCCCTTGCTGGGCTCGCATGACAGCAAGGTTTATGAGGCCCACC
TAGCCACCATGAAGGAGATTGTGTCTCAGTTGAGATACCTTCCTGTCATT
GAAAAGTGTCTCCATCAGTACTACTCTGCTAAGCATAACTCACTTGTACC
CAAACCAGTCGTTCTGCACCTTCTCAAAGCGCTCCGTACAGATCTAGTAT
CGTCGGGCTATATTTTTGGAGAAACGGGAGATCGAGTTGAGTTGGGCGAT
ATTTCGCGGTTATCAGAATCTATACTGCTCTCTTCCTCTACAGAGGTTAT
CATCACCGCATCCTTGGACCTGCATGGTTTCTTGGCCTTGTTCTGTGGCC
CGAATCTTCGAGTCGAGACTCTCGGTCTTTTGTATACTATGGCTGCCCGT
GCTTCGGCTTTTTTCGTTGACCGCGACGAGGGTAAGGATGCCGCATTTGT
CCCAGACATGGTTTGGTATAGCACGGTGATCTTACGACTAGCTCGGGACC
TTGCACCCCAGTCAAACGACGTCATTATATGGTTGGCGAATGAAAATGCA
CAGCTCAGGTCATTCCTTGAAGGAGATACGAGCCTCGGTGTGTGGCGTCT
GGTGGGCGATCTCTCGACCGATTTATTGGCTCTGGGCTTGAACAGGGAAG
CGACATATTCCCCCGAGAGAACCCCGTTTTTTCTTGCAGAGTGCCGGAGG
AGGTGCTTTGTGACTGAATATTACCTGGAGAAGATGTTTGGCCTGATATT
CAATCTAACTCCTCGCATTACCTCTCGATATGTGGACGTCAAGCTCCCCC
TTGATTTGTCAGATGACGAACTTTTTGCCCAAATTCCCCAGGAACTAGAG
GATGCAAAAAGTCGACTCACAAAAGATGGCTGGAACACAGATGGGAACCT
TAGAGCAGCAACCTGGGCTCGATTGCGCTATATTTTAAGTCAGTTTCGGG
AAGGGATTGTGGAATATCGTTTCCAAGCATCACAGGCAGCTGACCCTGCC
CAACTCAGAGAATTGTCTTCTCGATGTCGTCAGACGTGGGATAACCTGCT
TCCTCACCTAAGATATACTCAGGACTGTTGGGAATCCGACATGCCCCTGA
GCACTTGTTATATGCATGCGAAGGTTCATCTAGCCTATCTCCAAATCCAT
TTCCAGATATACCACCTTCTTGGAGAGAATAGCTCAACTCCGCTTCCCGA
GCTGCTGGACGTGTCTGCAAACATTCTGGAGACAGTGGTTCGGTTGGGAA
ATACCCGCAGAATGGGCGCCTTTACCTCGCATGATCTACCTGAAATCCTT
CTGGCCTGCGGCTTGCCGTCCGCGGCAGTCCTCCTGACTACACTAGAGAA
CAATACGCAAGATCCTTCAAGTACCCATCCGCCTGGCATAAAGACATCAG
CCGTGATTCGCAATGTTTCCGTCCTTACGTCGCAACTCGAAAGGGTGGCT
AGTTCGCGGGAAAGAAATCAAGCCTTCTGCTTGCAGGCGGCAAAGGCCTT
CACGAAGAAATTAGACAAGATTCTGGACAGGCTTGCGACGTCAAAGTTTC
AGGCTCGGACAAGTCCTGATGTTGCGACAAGAGTTGACGTAATGGACTCG
ATGCCGACTCCAATCACTGATCTTGACGCTTCTCTCACTGGTGGAGAGAG
TGCTGGAGATGGGGATAGAGAGATTGGTGCTTTCAATCTGGAGGACTACG
AGAATCTCGATCTAATGTCTTGGGCGATCGATTTTGACCTTGGAAACACG
GCCAGCGACTGGACAATGATGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009044CBS51388_009044Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009044-T1.exon1CBS51388_009044-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_009044-T1.exon2CBS51388_009044-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_009044-T1.exon3CBS51388_009044-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_009044-T1.exon4CBS51388_009044-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009044-T1.cdsCBS51388_009044-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009044-T1CBS51388_009044-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007219
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:1429151..1431115 +
Powered by Drupal