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Sequences
The following sequences are available for this feature:
mRNA from alignment at An14:1472588..1474645- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009059-T1 ID=CBS51388_009059-T1|Name=CBS51388_009059-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2058bp|location=Sequence derived from alignment at An14:1472588..1474645- (Aspergillus niger CBS 513.88)
ATGCACCTGCTAACCGAGCGAAAGGCTCCTCGAGCTCGCGGAATGGGCCG
ATCAGGACCCCGACGCCGCACGGGCTGTCTGACCTGCCGGGCACGTAAAG
TCCGTTGCGACGAGGCTAAACCCACGTGTGCCAATTGCACTCGCCTGCGA
TTGCAATGCACCTACAAAACCACCATTCAGACGGTCATCCCGCGACAACG
GCATGGCAGTCAAAGCTCAGGCACAGTCGCGAGCGCAGCATCGGCCCCCA
CCAGCACCGCCAGCACCACCTCATCCGACCGTCCAGACGTGAACTTCTTC
CACACCGTTCTCTGCAATGACCGACTTTCAGCATCGAATTCAGGATCCCC
GCAGCAGGTCGGTCCCAGCAATCGCCCTCAACAACAACAGCAGCAACCCC
TAGGTACGGATAATATCACCTCGTTTGATATCCTCAGTTTCATCGGCGAG
ATCACCTCCGACTTCCAGCAGAAACACCTCGATTTGACTACGAATGGCCT
GGCGGGGTTCCCAGCGGGCTCGGTCCCGGCGGCGATCGCGAACGAGGAAC
TCGACCAGAATGAACGGCCGATAAGTTGGGACGCGGGCTCAGTTTCAGTC
ATCCACGGTGATCGTTCAGAGCAAGGGTCTTCTTCCGATACAAGCGGTGG
TGGTAGTAGTGGTGGTGGTGGCCCTGGTCGGTTGACGTATGAGGATCGGT
TGTTTGCACATTTCGTGGAGGGGGACCCGCCGCCTACGATATTTGGGCCG
GTGGATTTGGATTGGGAGTACGTGCGTGCTAATGTTGTTGCACAGTCGCG
CGATAGTCGCGCAGTTTTACATGGGATTTATTGCTACGCGGAGATACATG
AGGCGTTGGTTGAGGGGAAAGCGTGGAAGTTGGCGTCGAGGTATCATCAG
CTGGCCTGTTCGGAAGTTCAGTCGTGCTTGCTGGGTGAAGTAGGGGAGAC
GGTACTGAAGAGGGTGTTTACTACGGTATTATTGTTGATGCTGGCAGAGG
TGAGTGTTTCTCAAGTTTCCTCTGATAATCCAACCACGGCTGAAGGGCTT
ACGAAACAGCTCATGTCTACCCCTGATCTATGGGGCTCAGGAACGTCCTT
TCTCCACTCTGCATATCTTCTGCTGCAGCGGTTTCACCACCGCACCAGGC
TGTGGACCGGTGTGAGCAATGTGATTGTGTCGTGGGTGTCATTGCTGGAT
GTCAAAGCACTGATAGCTGGCCGTGATGGCGACCCGCTGATCGACCTGGG
CAGCCTTTCATCCAAGGCAAGCACTACGTCTGAACTGGCCACGGAAGACA
AATGGGCCGACAATAGCGGCGACGAGGAGCCACCGAAGCCTGCATACCTT
ATGCGTGAAGCCATCACGGGCCCGGCCTTTCGCTTCTTCCTGCAAACACA
ACAGGTTATCCGACGGATTGTGTGCATCGACCTGCATCACCGCAGTCGCG
GGACTGTCAGTGATGAGTTTGAGGTGCTCCAGATAGCACACCAGGTCGGG
GCCGACCTCGAGACGCTCTGGAATCGGCGTCCGCGCGTGCTGGACGTCTA
CAGTACGCCTGAGGACCTCTTTAATACTCTACAGCCTGCTGTCGCGATCG
AAATCTGCCGGATGTTCCGACAGTACATCGCCAACTTCTTAGCGATCTTT
ATCTATCTACATCGGGTCGCGTTCGCCATCTACCCACGGACTGACCGAGT
GCATCGCGCAGTGGATCGGATCATTCAATTGGCAACTGCTGAGGTGGAGT
CCGGGGGCAATCAGCAACATTTGCCCGCCAGCTTTGTATGGCCGTTATTT
GTGGCTGGTCTCGAGGGATCGTTGGAGCAGCGAAGATGGATTGTGAAAGA
GATGCAACGGATTACTGGCAGCTGTAGTAGTGGCTGTCAGGATCCCGAGC
GCATCCGTGGAAGCTCTCGTACGGCGCGACATCCGCATGCGGGGAAAGCA
TTGCTACTGCTGGAGGAGATGACGCGACGACAAGATGCGTCGCGGACATG
GGCGGACTCGCGGTGCGTGCGACGGGAGCTATTTACTGACTTCTTCGTGA
TGATCTAG back to topCoding sequence (CDS) from alignment at An14:1472588..1474645- >CBS51388_009059-T1 ID=CBS51388_009059-T1|Name=CBS51388_009059-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2058bp|location=Sequence derived from alignment at An14:1472588..1474645- (Aspergillus niger CBS 513.88)
ATGCACCTGCTAACCGAGCGAAAGGCTCCTCGAGCTCGCGGAATGGGCCG
ATCAGGACCCCGACGCCGCACGGGCTGTCTGACCTGCCGGGCACGTAAAG
TCCGTTGCGACGAGGCTAAACCCACGTGTGCCAATTGCACTCGCCTGCGA
TTGCAATGCACCTACAAAACCACCATTCAGACGGTCATCCCGCGACAACG
GCATGGCAGTCAAAGCTCAGGCACAGTCGCGAGCGCAGCATCGGCCCCCA
CCAGCACCGCCAGCACCACCTCATCCGACCGTCCAGACGTGAACTTCTTC
CACACCGTTCTCTGCAATGACCGACTTTCAGCATCGAATTCAGGATCCCC
GCAGCAGGTCGGTCCCAGCAATCGCCCTCAACAACAACAGCAGCAACCCC
TAGGTACGGATAATATCACCTCGTTTGATATCCTCAGTTTCATCGGCGAG
ATCACCTCCGACTTCCAGCAGAAACACCTCGATTTGACTACGAATGGCCT
GGCGGGGTTCCCAGCGGGCTCGGTCCCGGCGGCGATCGCGAACGAGGAAC
TCGACCAGAATGAACGGCCGATAAGTTGGGACGCGGGCTCAGTTTCAGTC
ATCCACGGTGATCGTTCAGAGCAAGGGTCTTCTTCCGATACAAGCGGTGG
TGGTAGTAGTGGTGGTGGTGGCCCTGGTCGGTTGACGTATGAGGATCGGT
TGTTTGCACATTTCGTGGAGGGGGACCCGCCGCCTACGATATTTGGGCCG
GTGGATTTGGATTGGGAGTACGTGCGTGCTAATGTTGTTGCACAGTCGCG
CGATAGTCGCGCAGTTTTACATGGGATTTATTGCTACGCGGAGATACATG
AGGCGTTGGTTGAGGGGAAAGCGTGGAAGTTGGCGTCGAGGTATCATCAG
CTGGCCTGTTCGGAAGTTCAGTCGTGCTTGCTGGGTGAAGTAGGGGAGAC
GGTACTGAAGAGGGTGTTTACTACGGTATTATTGTTGATGCTGGCAGAGG
TGAGTGTTTCTCAAGTTTCCTCTGATAATCCAACCACGGCTGAAGGGCTT
ACGAAACAGCTCATGTCTACCCCTGATCTATGGGGCTCAGGAACGTCCTT
TCTCCACTCTGCATATCTTCTGCTGCAGCGGTTTCACCACCGCACCAGGC
TGTGGACCGGTGTGAGCAATGTGATTGTGTCGTGGGTGTCATTGCTGGAT
GTCAAAGCACTGATAGCTGGCCGTGATGGCGACCCGCTGATCGACCTGGG
CAGCCTTTCATCCAAGGCAAGCACTACGTCTGAACTGGCCACGGAAGACA
AATGGGCCGACAATAGCGGCGACGAGGAGCCACCGAAGCCTGCATACCTT
ATGCGTGAAGCCATCACGGGCCCGGCCTTTCGCTTCTTCCTGCAAACACA
ACAGGTTATCCGACGGATTGTGTGCATCGACCTGCATCACCGCAGTCGCG
GGACTGTCAGTGATGAGTTTGAGGTGCTCCAGATAGCACACCAGGTCGGG
GCCGACCTCGAGACGCTCTGGAATCGGCGTCCGCGCGTGCTGGACGTCTA
CAGTACGCCTGAGGACCTCTTTAATACTCTACAGCCTGCTGTCGCGATCG
AAATCTGCCGGATGTTCCGACAGTACATCGCCAACTTCTTAGCGATCTTT
ATCTATCTACATCGGGTCGCGTTCGCCATCTACCCACGGACTGACCGAGT
GCATCGCGCAGTGGATCGGATCATTCAATTGGCAACTGCTGAGGTGGAGT
CCGGGGGCAATCAGCAACATTTGCCCGCCAGCTTTGTATGGCCGTTATTT
GTGGCTGGTCTCGAGGGATCGTTGGAGCAGCGAAGATGGATTGTGAAAGA
GATGCAACGGATTACTGGCAGCTGTAGTAGTGGCTGTCAGGATCCCGAGC
GCATCCGTGGAAGCTCTCGTACGGCGCGACATCCGCATGCGGGGAAAGCA
TTGCTACTGCTGGAGGAGATGACGCGACGACAAGATGCGTCGCGGACATG
GGCGGACTCGCGGTGCGTGCGACGGGAGCTATTTACTGACTTCTTCGTGA
TGATCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An14 | supercontig | An14:1472588..1474645 - |
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